Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139380962
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Entry
139380962 CDS
T10872
Name
(RefSeq) interferon-inducible double-stranded RNA-dependent protein kinase activator A homolog
KO
K24540
interferon-inducible double-stranded RNA-dependent protein kinase activator A
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139380962
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Gene silencing
microRNA pathway
RISC loading complex
139380962
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Ortholog
Paralog
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GFIT
Motif
Pfam:
dsrm
DSRM_2
DND1_DSRM
Staufen_C
Motif
Other DBs
NCBI-GeneID:
139380962
NCBI-ProteinID:
XP_070980264
LinkDB
All DBs
Position
22:44687900..44692514
Genome browser
AA seq
308 aa
AA seq
DB search
MSQDGFQPTLIRTTHTNNTSSSIQQPQAPCPGKTPIQVLHEYGTKIGNLPVYVMEKAEGE
AHQPSFIFNVTIGDMSCTGQGASKKAAKHQAAESALNLLEIDPGTPLHIKKESNGNPAKP
NDQPNSVGKLQELALQWGWRLPEYTVFTEAGPPHKREFTVTCRMESLTETATGNSKKVAK
KAGAEKMLAKLQNVSGCPEITWIPKPGVRLENLRNSSAEKMSLLRRNPLSIPNTDYIQMM
LELSQEQGFEVTYFDIDELTVNGQYQCLAELSTSPVTVCHGTGISCGNAHNDAAHNALQY
VKIMASIK
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagacggatttcaacctacacttataaggaccacgcacactaacaacacgagc
tcgagtattcaacaaccacaggcaccgtgccctggtaaaacacccatacaagttctacat
gaatatggaacaaaaattggtaaccttcccgtgtacgtgatggaaaaggccgaaggggag
gcgcaccaacccagcttcatcttcaacgttacaataggagatatgtcctgcacaggtcaa
ggagccagtaaaaaagccgccaaacaccaagccgctgagtctgccctgaaccttctggaa
atagaccccggaacaccccttcacataaagaaggagagtaatggcaacccagcaaagcct
aacgaccaacccaactcagtggggaaactgcaggagctggccctgcagtgggggtggcgc
ctcccagaatacaccgttttcacagaggcaggcccacctcacaagagagagttcactgtt
acctgcagaatggagtcgctcacagagactgcgacgggaaattccaagaaggtggctaaa
aaggcaggtgctgagaagatgttagcaaaacttcaaaatgtgtctggttgtcctgaaatc
acatggatcccaaagcccggtgtccgattggagaacttgcgtaactcctcggcagagaag
atgtctctcctaagaaggaacccactcagtattcccaacacagactacatccagatgatg
ctggagctgtcccaagagcagggctttgaagtcacatactttgacattgatgagctgaca
gtgaacgggcagtaccagtgcttggcagagctgtccacctcacctgtcaccgtatgtcac
ggcacaggcatctcctgcggcaacgcacataacgacgccgcacacaacgctctccagtac
gtcaagatcatggcttccatcaaatga
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