KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139380968
Entry
139380968         CDS       T10872                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A3-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    139380968
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ocla03019]
    139380968
   03041 Spliceosome [BR:ocla03041]
    139380968
Messenger RNA biogenesis [BR:ocla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     139380968
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     139380968
Spliceosome [BR:ocla03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    139380968
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2 RRM_3 OB_RNB PHM7_cyt Lipl32
Other DBs
NCBI-GeneID: 139380968
NCBI-ProteinID: XP_070980271
LinkDB
Position
22:complement(44871541..44876361)
AA seq 334 aa
MEGHEAREPEQLRKLFIGGLSFETTEESLRIHFEQWGNLTDSVVMRDPNNKRSRGFGFVT
YSCVEEVDACMAARPHKVDGRVVEPKRAVSREDSNRPGAHLRVKKIFVGGIKEDTEEDHI
REYFETYGRIETIDIMEERATGKKRGFCFVSFDDNDTVDKIVAQKYHTINTHNCEVRKAL
SKQEMMEASNQRSGGGGSGNFMGRGGNFGRGGYGGGRGGYGGGDGYGGDGGNYSGGPSYG
GGRGGGGYGGGGPGYGNQGGGYDNYNDGGNLGGNFGGGGGGGGNYNDFGNYRGQQSSYGP
MKGNNFGGRNSTSPYGGGYGSGNGSGGGYGSQRY
NT seq 1005 nt   +upstreamnt  +downstreamnt
atggagggccatgaagctagggagcctgaacagctcaggaagctgttcattgggggcctc
agttttgaaaccactgaagaaagtttaaggatccattttgaacaatggggaaacctcaca
gatagtgtggtgatgagggacccaaacaacaagcgctccagagggtttggctttgtaaca
tactcctgtgtggaggaggtggatgcctgcatggcagctcgccctcataaggtggacggg
cgtgttgtcgaacctaaaagggctgtgtcgagagaggactccaacagaccaggtgcccac
ctgagggtgaagaagatctttgttgggggtatcaaggaggacaccgaggaggaccatatc
agagagtactttgagacctacgggaggatcgagaccattgacattatggaggaacgcgca
actgggaagaagaggggattctgctttgtttcatttgatgacaatgacactgtggataaa
attgtcgctcaaaaataccacacaataaacacacacaactgcgaagtcagaaaagcactt
tcaaaacaggaaatgatggaagcgtccaatcagaggagtgggggtggtggctctgggaac
ttcatgggtagaggtggcaactttgggcgaggaggctacggtggaggaagaggaggttat
ggaggaggggatggatatgggggagatggtgggaactatagtggaggtcctagctacgga
ggtggacgtggtggggggggttatgggggaggaggtcctgggtatggaaaccagggagga
ggatatgataactacaatgacggaggcaacttgggaggaaactttggtggtggaggagga
ggtggtggaaattacaatgactttggtaactacagaggacagcaatccagctatggcccc
atgaagggaaacaactttggtggcagaaactctactagcccctatggaggtggctatggc
tcaggcaatggaagtgggggtggctacggctcacagcgctattga

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