Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139380972
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Entry
139380972 CDS
T10872
Name
(RefSeq) trafficking protein particle complex subunit 10-like
KO
K20307
trafficking protein particle complex subunit 10
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139380972
Membrane trafficking [BR:
ocla04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
139380972
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Ig_TRAPPC10
Foie-gras_1
SNAP
TPR_7
TPR_12
DUF5001
Motif
Other DBs
NCBI-GeneID:
139380972
NCBI-ProteinID:
XP_070980278
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Position
22:complement(46184677..46220500)
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AA seq
1270 aa
AA seq
DB search
MMEPQEEKPIIYTMENKPIVTCAGDQALFSSLYTPLAQQLPREPMEWKRSYGRAPKMIHL
EANFVQFKEELLPKEGNKALLTFPFLHIYWTDCCDTEVYKASVRDNMMRWQGNLRLHGSA
DWVIVVVETSDAKKKNKTNILPRSSLVDKIRNDFCNKQNDRCVVLSDPLKNSSRSQESWS
AFLLKLRTLLLMSFTQNLGRFDEDMRTLREKRNQPGWSFCDYFMVQEELAFVFEMLQQFE
DALLQYDELDALFTQYVLNFGAGDGANWLGSFCSPVKSWTGLLLRRPIDMEKRDGIQRGQ
ASLLELRSYLFCRQCTLLIFLQRPWEVTQRALELLHNCVQELCLLEVSMLEGALDCWVFL
SCLEVLHRIEGCCDQAQLEANVSHTVGLWAYATDKLKSLGYMCGLVSEKGPLSLELNRTV
DLLAGLGDEKAETVHSLQSPYKKLKEALSSVEAFERHYLELSHAAVEMYTAIGRMRSARL
VGKSLAEFYMRKGDPEQAESFLQNALGSYVSEGWSLPVTHTRKQMAECQKLLGKTENYLQ
TSALLAGDANLTNEERIHFCQEILTFADQSTDSKAQKVALSMSSFAQLKQLQFRPATATV
HSGTALQVELCLRSLMPVAVPLEQLAVSVHVNLEQGETNGKTRGPQRRPYPGTVLFRLGN
SSAMPPSAAGPSLELEEIQHRSPSDPRTLNSTGMVCKNTHLVMRRHDSSPSPDTPNLVSP
VPVVMDDGAKMLMSGDVTLLPGNNSIVFSVPSQELGTYTLLRQLCATVGQVQFVLPHISP
LVQYEVYSQEPQLTVEPLTDQLLAGLPQRAKVRLQTGHYTVKKGDALQLTNIDSIPILTS
SSCPATIFNSTAERVDESVLFIQSSDKVTSISLPPTPPYHTLEFQLEVLCVIPSDPVRPE
NQRLTNGEIHHRPRSYSHPDNHMTAINQRMSVDCPWSIYSTPISLTFYIPFKAKHSLLSA
GNRNYIQVCLQNVSDVNFHLMDQRLTEKHHESSLELQSLNTKAQQLVCSKQSVYCVWDVR
WKENMPVCLQCVFSASFSSASEEVSAFKPYHYEFQLERVTTLYSVRAEIMPAAGQQNCHS
GSLCGLEMSITRLAEPDDDEEDDGGTEEKGQTETEEVCSTKLMYEVAGSSWVVYGRSSGL
VSMPADANANHRVQVELMPLFAGHLPFPDIKVFKYLPPSANSASQPDTDSCVENGMLSLI
DRPLDDQGDTASFCSQGSVHSVGSGEQQSRVLPMPRLEPFSPGQVFNHSQGCQVLVLPST
DDCVLEINAT
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgatggagcctcaagaggagaagcccattatttacacaatggagaacaagccgattgtg
acatgcgctggggaccaggccttgttctcttctctctacaccccattggcccagcagctt
cccagggaaccaatggagtggaagaggtcgtatggacgagcaccaaagatgatccattta
gaggccaactttgtccagttcaaagaggaactcctccctaaagagggaaacaaagccctc
ctcactttccccttcctccatatctactggacagactgctgtgacactgaggtgtacaag
gcgtcagtcagggacaacatgatgaggtggcagggcaacctgcggctccacgggtcagct
gactgggtcatcgttgtcgtggagaccagcgacgccaagaagaagaacaagaccaacatc
ctgcctcgctcttccttagtggacaagatccgcaacgacttctgtaacaagcagaatgac
cgttgtgtggttctgtcagaccctctaaagaattcgtccaggtctcaggagtcgtggagt
gccttcctgctgaagctgaggactctactgctgatgtccttcactcagaacctgggacgc
ttcgatgaggacatgcgcaccctccgggagaaacgcaatcagcccggatggagcttctgt
gactacttcatggtacaggaggagttggcctttgtgtttgagatgctgcagcagtttgag
gatgctctgctccagtacgacgagctggacgccctcttcactcagtatgttctcaacttc
ggggctggagacggtgccaactggctgggttctttctgctccccggtgaagagctggact
ggcttgctcctgaggcgccccatagacatggagaagagagatgggatccaacgcgggcag
gctagcctgctagagttacgcagctacctgttctgtcgtcagtgtaccctgctcatcttc
ctccagaggccctgggaggtgacacagagagccctggagctgctgcataactgtgtccag
gagctatgcctgctggaggtgtctatgctagagggtgcattagactgctgggtcttcctc
agctgcctggaggtgctgcatcgtatagaaggctgctgtgaccaggcccagctagaggct
aatgtctcccacactgtgggcctgtgggcctatgctactgacaagctgaagtctctgggc
tatatgtgtggtctggtgtcagagaagggtccactgtctctggagctgaaccgaactgtg
gacctgctggctggactgggggatgagaaggctgagactgtccacagcttgcagagcccg
tataaaaaactgaaggaggccctgtcttctgtggaggcgtttgagagacattatcttgag
ttgtcccatgctgctgtggagatgtacacggccattggcaggatgaggtcagcgcggctc
gttgggaagagcctggctgagttctacatgaggaaaggtgatcctgagcaggcggagagc
ttcttgcagaatgctctggggtcatacgtatcagaggggtggagcctacctgtcactcac
accaggaagcagatggctgagtgccagaaactgctggggaagacagagaactacctgcag
acaagtgccttgttggcaggtgatgccaatctgaccaatgaggagaggattcacttctgt
caggagatcctgactttcgccgaccaatcaacagacagcaaggcccagaaggtggcgctc
agtatgagttctttcgcccagctcaagcagctgcagttccgcccggcaacagccacggtg
cactctggcaccgccctgcaggtggagttgtgtctgcgcagcttgatgcctgtggccgtg
cctctggaacagctggctgtcagtgttcacgtaaacctggagcagggagagactaacggg
aagaccagggggccacagagacggccatacccagggacggtgcttttccgcctgggtaac
tcctcagcgatgcccccctccgctgctggtccttctctggagctggaagagatccagcac
cgcagcccctcggaccctcgtacactcaactccactggcatggtgtgtaagaacacacac
ctggtcatgcgtcgtcatgacagcagcccgtcaccggacacgcccaaccttgtcagccca
gttcctgttgtcatggatgacggggcaaagatgctaatgagcggtgatgtcactctgctg
ccgggcaacaacagcattgtcttcagtgtaccaagtcaggagctcggtacctacacgttg
ttgcgtcagctgtgtgccacagtgggccaggtccagtttgtcctccctcacatctctcct
ctggtccagtatgaggtctattctcaggagccccaactcactgtggagcccctcacagac
cagctgctggcaggcctcccccagagggcaaaggtcaggctgcagacaggtcactacact
gtgaagaagggagacgccctgcagctcactaacatagacagcattcccatcctcacctcc
tcctcctgccctgctaccatcttcaacagcactgcagagcgtgtggatgagagtgttctg
ttcatccagtcatctgacaaagtgaccagtatctctctacctcccaccccaccctatcac
accctggagtttcagctggaggtactgtgtgtcatcccttctgatccagtccggcccgag
aaccagagactcacaaacggagagatacaccaccgtccccggagctacagccaccccgat
aaccacatgaccgccatcaaccagaggatgtctgtagactgtccctggtccatctactcc
actccaatatccctcaccttctacatcccctttaaggccaagcactcactactatcagca
gggaacaggaactacatccaggtgtgtctgcagaacgtgtcagatgtgaactttcacctg
atggaccagaggctaacagagaaacatcacgagtcttctctggaactgcagtccctcaac
actaaagcacaacagttggtgtgcagtaagcagagtgtttactgcgtgtgggatgtgagg
tggaaggaaaacatgccagtctgtctacagtgtgtgttctctgccagcttctcctctgct
tctgaggaagtctcagccttcaagccctaccactacgagtttcaactggagagagtgaca
acactgtacagtgtgagggcagagatcatgcctgcggctggtcaacaaaactgtcactct
ggctccctctgtgggctggagatgtccattacacgactggctgaacctgatgatgatgag
gaagatgatggagggacagaggaaaaagggcagacagagacagaggaggtctgctccacc
aagctcatgtatgaagtggcaggcagtagctgggtggtgtatggcagaagctcagggctg
gtgtccatgccagcggatgctaatgccaaccacagggtacaggttgagttgatgcccctg
ttcgctggccacctgccattccctgacatcaaggtgtttaagtacctacctcccagtgcc
aactccgccagccaacctgatacagacagctgtgtagaaaacggcatgctctccctgata
gaccggcctctggatgatcagggggacacggccagcttctgtagccagggaagtgtccac
tctgtgggcagcggggagcagcagtccagggttcttcccatgcctcgcctggagcccttc
agcccgggacaggtgttcaaccacagccagggatgccaggtcctggtgcttccctctact
gatgactgcgttctagagatcaacgctacgtga
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