Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139380978
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Entry
139380978 CDS
T10872
Name
(RefSeq) integrator complex subunit 6 isoform X1
KO
K13143
integrator complex subunit 6
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocla03041
]
139380978
Spliceosome [BR:
ocla03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
139380978
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GFIT
Motif
Pfam:
Beta-barrel_INTS6
INT_SG_DDX_CT_C
VWA_2
VWA
Motif
Other DBs
NCBI-GeneID:
139380978
NCBI-ProteinID:
XP_070980286
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Position
22:complement(46748128..46795993)
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AA seq
870 aa
AA seq
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MPVLLFLIDTSASMNQRTHLGTTYLDIAKGAVETFMKLRGRDPASRGDRYMLINFEDVPL
GIKAGWKESHATFMTELRNLQAAGLTTIGQSLRTAFDLLNLNRLVSGIDNYGQGRNPFFL
EPSIIVAITDGNKLTSSGGVQDELHLPLTTPLPGSELTKEPFRWDQRLFSLVLRIPGHAT
VEPEPLGGVPPDDSAITPMCEVTGGRSYSVFSQRMLNQCLESLLQKIQSGVVINFEKTGP
DPPPGEDETLKPGPQSWHCCHKLIYVRPNPKTGVPIGHWPIPEGFWPDTNSPTLPPRSAH
PHVRFSCLDSEPMVIDKVPFDKYELEASPLTQYILERKSPHTCWQVFVSNSAKYSDLGQP
FGYLKASTALNCVNLFVMPYNYPVVLPLLDDLIRVHKFKPTIKWRQSFENYLKTMPLYYI
GSLRKALRIMGAPNLLADNMEYGLSYSVVSYLKKLSQQTKIEYERLIASVAKKVVAEGGI
KVRDRGGDISLAQRRDFTQLLASITGETAALPLELNSKEFSGFQLAPLNKSLKPQGFRNA
YDIPRMHLLDQLSRMRRNLLSTTCLLRGQDTDQLHSVPIAQMGNYQDFLKALPQPLRDAD
PEQPKRLHTFGNPFKLDKKGMMIDEADEFVTGPQNKGKRPGSDSNMHGVGGGGPKRRRCM
SPLLRPGRAYSPPVSPAASPFRPPLAECDQNESDSEAVFGNLYNPETCETGTTVQPGEIL
SGPLLDGPGTGNRMEADGDTEEENGLPREVELSEGSEDGGETGGVVEEQRPARYPSPGEL
KKVMNSESLEVNTELRALITKEIRKPGRHYEKIFYFLKQIQGSFDTRLIFLQNIIKEAAR
FKKRVLIEQLENFLEEIHNRANNMNHLDGF
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtgttactttttctgatagacacgtccgcgtcaatgaaccagcgcacccatctg
ggcactacctatctggacattgcaaaaggcgctgttgagactttcatgaagcttagaggc
agagatccggcgagccgaggggaccggtatatgttgataaattttgaggacgttcccctc
ggaatcaaggctggatggaaagagagccatgccacattcatgacagagctgaggaacctt
caagcagcaggactcacaactattggccagtctttgaggaccgcttttgatttgctcaat
ctcaatagattagtgtctgggatagacaactatggacagggcaggaatccctttttcctg
gagccgtccatcatagtggccatcaccgacggcaacaagctgaccagcagtggcggagtc
caggatgagctccaccttcccctgaccactcctctgccgggcagtgagctgaccaaggag
ccgttccgctgggaccagcgtttgttctccctggtgctgaggatccctggacacgccact
gtagagcctgaaccactgggaggggtcccccccgacgactcggccatcacccccatgtgc
gaggtcaccggaggtcgctcctacagtgtgttctcccagcgcatgttgaatcagtgtctg
gagtctctactgcagaagatccagagtggagtggtcatcaactttgagaagacgggcccg
gacccccctcctggagaggatgagaccctgaagcccggcccccagtcgtggcactgctgc
cacaagctgatctacgtacgacccaaccccaagaccggtgtgcccatcggacactggccc
attcctgaaggcttctggcccgacacgaactcccccaccctgccccctcgctcggcccac
ccccacgtgcgtttctcctgtctggactcagagcccatggtgattgacaaggttcccttt
gacaagtacgagctggaggcttcacctctcacacagtacatcctggagaggaagtcccct
catacctgctggcaggtgtttgtaagtaacagtgccaagtacagtgacctgggccagccc
tttggctacctgaaggccagcacggctctcaactgtgtcaacctcttcgtcatgccctac
aactaccctgttgtactgcctctactggatgacttgatccgggtgcacaagttcaagccc
accattaaatggcgtcagtcatttgagaactacctgaagaccatgcctctttattacatt
gggtccctccggaaggcgctaaggatcatgggagctcctaacctcctggccgacaacatg
gagtatggtctgagttacagtgtggtgtcctacctcaagaagctcagccagcagaccaag
atagagtacgagcggctgatagcatctgtagctaagaaggtggtagcggagggtggcatc
aaggtgcgtgaccgcggtggggacatctctctggcccagcgcagagacttcactcagctt
ctggccagcatcacaggagagacggccgccctgcccctggagctaaactctaaagagttc
tctggctttcagctggctcctctcaacaagagtctgaaacctcagggtttccggaacgcc
tacgacattcccagaatgcacctcctggatcagctgagccgcatgaggaggaacctactc
agcaccacctgtctgctccgaggacaggacacagaccagctgcacagtgtgcccatcgcc
cagatggggaactaccaggacttcctcaaagcccttccccaacccctcagagacgcagac
cctgaacagcccaaacgcctgcacaccttcggaaatcctttcaaactggacaagaagggg
atgatgattgacgaggccgatgagtttgtgacgggtccccagaacaagggcaagcgtccg
gggagtgactccaacatgcacggggtcgggggtgggggtcctaagagacgacggtgcatg
tcccctctactgcgccccggcagagcctattcgccccccgtcagccctgcagccagcccc
ttcagaccccccctcgccgagtgcgaccagaatgagtcagactcagaggctgtttttggg
aacctctacaacccagagacgtgtgagaccgggacaacggtccaaccaggagagatcctc
tctggaccccttctagacggccccggcacagggaaccgcatggaggctgatggggacact
gaggaggagaacggacttcccagggaggtggagctctcagagggcagtgaggatggagga
gagactgggggtgtggtggaggagcagcgcccggcccggtacccctcccccggggagctg
aagaaggtgatgaacagcgagagtctggaggtcaacaccgaactacgagccctcatcacc
aaggagatacggaaacccgggagacactatgaaaaaatcttctacttcctgaagcagatc
caaggaagctttgacacacggttgatatttctccagaacattataaaagaagctgcaagg
ttcaagaagcgggtgctgatagaacagctggagaactttctagaagagatccataacaga
gccaacaatatgaaccacctagatgggttctaa
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