Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139380985
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Entry
139380985 CDS
T10872
Name
(RefSeq) tubulin alpha chain
KO
K07374
tubulin alpha
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04145
Phagosome
ocla04210
Apoptosis
ocla04530
Tight junction
ocla04540
Gap junction
ocla04814
Motor proteins
ocla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
139380985
09143 Cell growth and death
04210 Apoptosis
139380985
09144 Cellular community - eukaryotes
04530 Tight junction
139380985
04540 Gap junction
139380985
09142 Cell motility
04814 Motor proteins
139380985
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139380985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139380985
03036 Chromosome and associated proteins [BR:
ocla03036
]
139380985
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139380985
04147 Exosome [BR:
ocla04147
]
139380985
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139380985
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
139380985
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
139380985
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139380985
Exosomal proteins of other body fluids (saliva and urine)
139380985
Exosomal proteins of colorectal cancer cells
139380985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
139380985
NCBI-ProteinID:
XP_070980303
LinkDB
All DBs
Position
22:complement(48537844..48543873)
Genome browser
AA seq
450 aa
AA seq
DB search
MRECISMHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTCGGGDDSFNTFFSETGAGK
HVPRAIFVDLEPTVIDEVRTGIYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDIVLD
RTRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVADITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIAAIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGTDSVGEEDEEGEEY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatttccatgcatgtgggccaagccggagtccagatgggtaacgcctgt
tgggagctgtactgcctggagcatgggatccagccggacggacagatgcccagtgacaag
acctgtggaggtggagatgactccttcaacaccttcttcagtgagaccggagccggaaag
catgtcccccgagccatcttcgtagatctggagcccactgtcatcgatgaggtgaggaca
ggtatctatcgtcagttgttccaccctgagcagctgatcactggtaaagaagatgctgcc
aacaactacgcccgcggtcactacaccattggcaaggagatcattgacattgtgctggac
aggacacgcaaactggctgaccagtgtacaggtctccaggggttcctcatcttccacagc
ttcggaggaggcaccggttctggtttcacctccctgctgatggaacgtctgtctgtcgac
tacggaaagaagtctaagcttgagtttgccgtttacccagctccccaggtgtccacggct
gtggtggagccctacaactccatcctgaccactcacaccaccctggagcactctgactgt
gccttcatggtggacaatgaggccatctatgacatctgccgtaggaaccttgacattgag
cgtccctcatacaccaacctcaacaggctcattggtcagatcgtctcctccatcactgcc
tccctgcgtttcgatggagccctgaatgttgatctgacagagttccagaccaacttggtg
ccctacccccgtatccacttccctctggccacctatgccccagtcatctccgctgagaag
gcctatcacgagcagctgtcagtcgctgacatcaccaacgcctgctttgagccggccaat
cagatggtgaagtgtgaccctcgtcacggcaaatacatggcctgctgtctcctgtaccgt
ggtgacgttgttcccaaagatgtcaactctgccatcgctgccatcaaaaccaagaggagt
atccagtttgtggactggtgtcccactggcttcaaggtgggtatcaactaccagccccct
acggtggttcctggaggagacctggccaaggtccagagggctgtgtgcatgctgagtaac
accacagccatcgctgaggcctgggcccgtctggaccacaagtttgacctgatgtatgcc
aagagagccttcgtgcactggtacgttggtgagggcatggaggagggagagttctctgag
gccagagaagacatggcagccctggagaaggactatgaagaggtgggcactgacagcgtg
ggagaagaggatgaggagggagaggaatattaa
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