Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139381020
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Entry
139381020 CDS
T10872
Name
(RefSeq) speckle-type POZ protein-like A
KO
K10523
speckle-type POZ protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
139381020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139381020
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
139381020
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Gene cluster
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BTB_2
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
139381020
NCBI-ProteinID:
XP_070980353
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Position
22:53109899..53164964
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AA seq
392 aa
AA seq
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MSRVPTPPPPGDMSTGPVAESWCYTQVKVVKFSYMWTINNFSFCREEMGEVLKSSTFSSG
PNDKMKWCLRVNPKGLDDESKDYLSLYLLLVSCPKSEVRAKFKFSLLNTKREETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQSNMNMLK
VPECQLSDDLGNLWQCSRFTDCSLYVGGQEFKAHKSILAARSPVFNAMFEHEMEESKKNR
VDISDVEPDVFKEMMGFIYTGKAPNLEKMADNLLAAADKYALERLKVMCEEALCTSLSVE
NVADTLILADLHSAEQLKAQAIDFINRCSVLRQLGCKDGKNWNSSHATDIMETAGWKSMI
QSHPHLVAEAFRALASAQCPPFGLPRKRLKQS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgggttcctacccctcctccaccaggggacatgtctactggacctgtggcagag
agctggtgttacacacaggtgaaagtagtcaagttctcctacatgtggaccatcaacaac
ttcagtttctgtagagaggagatgggggaggtcttaaagagttccaccttctcctctgga
cccaacgacaagatgaaatggtgtctgagagtcaacccaaaaggactggatgatgaaagc
aaagattatctgtcgttgtatttacttcttgttagttgtccaaaaagtgaagtcagagcc
aagttcaagttttccttattgaacactaaaagagaagagactaaagctatggaaagccaa
agagcctatcggtttgtccaggggaaagactggggcttcaaaaagtttattagaagagat
ttcctgcttgatgaagccaatgggctgttacctgatgacaaactcaccctgttctgtgag
gtgagtgtggtgcaggactctgtgaacatctctggccagtccaacatgaacatgctgaag
gtaccagagtgccagctgtcagatgacctggggaacctgtggcagtgttcccgcttcact
gattgttccctctatgtgggagggcaggagttcaaggcacacaaatccatcctggcagca
agatcccccgtctttaacgccatgtttgaacatgagatggaggagagtaaaaagaaccgt
gtggacatcagtgatgtagagccagacgtgtttaaggagatgatgggattcatctacaca
gggaaagctcccaacctggagaagatggccgacaacctgctggcagctgctgacaaatat
gccttggagcgtttaaaggtgatgtgtgaagaggctctgtgcaccagcctctctgtggag
aacgtggctgataccctgatcctggcggacttacacagtgcagagcagctcaaagcacaa
gccatagattttatcaacaggtgcagcgtcctccgacagctgggctgtaaagatgggaaa
aactggaatagcagtcatgccacggacataatggagacggcaggctggaagtcaatgatc
cagtcccaccctcacttagtggccgaggccttcagagccttggcatcggcacagtgccct
cccttcggcctgccgaggaaacgcctaaaacagtcctga
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