Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139381106
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Entry
139381106 CDS
T10872
Name
(RefSeq) zinc finger protein 488-like
KO
K20797
PR domain zinc finger protein 8 [EC:2.1.1.-]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139381106
03036 Chromosome and associated proteins [BR:
ocla03036
]
139381106
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
139381106
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
139381106
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_fungi_2
SET
zf-C2H2_4
FOG1-like_PR
Motif
Other DBs
NCBI-GeneID:
139381106
NCBI-ProteinID:
XP_070980494
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Position
23:complement(1049727..1054126)
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AA seq
521 aa
AA seq
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MNHHLLPHSLWTSEGKFLHHHATVLYSSVHVMCNIPAGAQFGPCILQNTFHDTIAFIALK
SSDKRSKSYVFRVGPEAMRSSALVLSWLRLVQAARHREEQNTEAFLKGGQLYFRTTKEIH
QDEELLVWYDQELSHLLGFTDISTRGHNAELKCAKCNLVFKNEHPYLAHCSFLCSQVKND
IPSREAYEHKHIEIKRQHRITDFHNIARNLEHKESSASEEEEISLRKRKHEETDYPRWRK
PVLLEKTNILNDNITQITRDYHLIVPESPGSVLKLKAAKYQLKKDQVECKNSAFTEVGAA
KRSVMHKKEMPTEADSEIVRAISSGLNSKSNNSEFSFFLLSGQEEQKSAFCKPNKGTSSN
CSTAHPSNTPAPSNHLEDVRDIFTSKTVLGYNNLLASNNIMLNGDLPGAQTLPTPVTCNA
FPFPPEHWSRIIGAQIQTTSSLTILPPTFSSFGVSVQNWCAKCNLSFRMTSDLVFHMRSH
HKKEFLERSQVRRLEEKLICPICHEFFRERHHLSRHMTSHN
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgaaccatcatttattacctcattccctctggaccagcgagggtaaattcctccaccac
catgcgacagtcctctactccagtgtacatgtcatgtgcaacatccctgctggggcacag
ttcggcccgtgcatccttcagaacacgttccatgacaccatcgccttcatagcgctaaaa
tccagcgacaagagaagcaaatcatacgtgttcagggtgggccccgaggctatgcggagc
tctgctctcgtgctgtcctggctgcgtctggtgcaagcggcacgtcaccgggaggagcag
aacaccgaagcgttcctgaagggaggccagctgtatttccggaccactaaggaaatccat
caggatgaggaactgttggtgtggtatgaccaagagctgtcacatctactgggcttcact
gacatctcaaccagaggacataatgccgagctcaaatgtgcaaaatgtaacctggtcttc
aagaacgagcatccctacttggcccactgcagcttcctgtgctcccaggtgaagaatgac
attccgagcagagaggcctatgaacacaaacacattgaaataaaacggcaacaccgcatc
acagacttccacaacatcgccaggaatctggaacataaagaatccagcgccagtgaagaa
gaagagatttctctgcggaaaaggaaacatgaggagacagattacccccgatggaggaaa
ccagtgttactggagaaaaccaacatcttgaatgacaacatcacacagataaccagagac
taccacctcattgtgccagagtcacctggctctgttttgaaactgaaggcggctaagtac
cagctcaaaaaggaccaagtggaatgcaaaaatagtgcgttcacagaagtaggagctgca
aaaaggagtgttatgcacaagaaagaaatgccaacagaggctgattctgagatagtgagg
gcgataagctctggtttgaactccaagagcaacaacagtgagttttcattctttctgctc
agtggacaggaggagcagaaaagcgctttctgtaaacccaataaagggacttcttctaac
tgctctacagctcatccatccaacacacctgccccatcgaaccacctagaagatgtgaga
gacatttttacctcaaagactgttctgggatacaacaatttgttggcatctaataacatt
atgttgaatggtgatttacctggcgcacagaccctacccacaccggttacttgcaatgct
tttcctttcccaccagagcactggtccaggattattggagcccaaatacaaacaacatca
tctctaacaattcttcctccaacatttagctcctttggggtgtcagtgcagaactggtgc
gccaagtgtaacctctccttccgcatgacttcagacctggtgtttcacatgcgctcccac
cacaagaaggagtttctggagcggtcccaggtgaggaggctagaggagaaactcatatgc
cctatctgccacgagttcttccgggaacggcaccacctgtcacgccacatgacttctcac
aattaa
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