Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139381142
Help
Entry
139381142 CDS
T10872
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 isoform X1
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocla03041
]
139381142
Enzymes [BR:
ocla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
139381142
Spliceosome [BR:
ocla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
139381142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
DEAD
Motif
Other DBs
NCBI-GeneID:
139381142
NCBI-ProteinID:
XP_070980588
LinkDB
All DBs
Position
23:15083852..15091658
Genome browser
AA seq
751 aa
AA seq
DB search
MAQGITGEKYWEDRVAFETEGAGQEVVEYGDVLELNRFDGLPYSSRYYTLLKERMDLPVW
KAKCDFMDKLANRQFIIVSGTARTGRSSQWGVLNRCTLQEKREMFKLIPQWCAEFCLAVQ
YQNGMVVCTQVHRQHTVDLALRVADEMDVNIGHEVGYSIPLETCCSGDTVLRYCTDDMLL
REMMSDPMLEHYGVIVIDQAHERTVSTDVLLGLLKDITLQRPELRVVLLTATHPGPKLLG
HYKNVPLIQLEGVCSAEVVYTGTSHKDYFCSALRLVLEIHHSQEEGDIVVFLATTQEIDL
ARDILLREEANIPTHLGELLPISVHPGLGGTLPMPGEEEGRCRRVFLTSSPNEDLFWAVH
MLNFVIDAGVQKRNVYNPRIRANSVAIQPISRIQAESRKQLVGPTGKTFCLYPEDTPLPS
ETRPHILESDITSTVLFLKRMDIGGLGRCDFIDRPDPEGLMQALEELDYLAALDDDGNLS
EIGIIMSEFPLEPQMAKTLLASCEFDCVNEVVTIAAMLTAPSCFLVPSRELRLEASQCHL
KFQHPEGDHFTLINIYKAFKQNQHEPFVSVEKWCQDYFLSLSALQTADAIRSELTDILRR
IELPVSMPSFGSKGNTLNIKRALLAGFFMQVARDVDSSGNYFMLTHKHVAQIHPFSAYGT
KTPKLGLPEWVLFHQYSFSEDNCIRTVSHISPEEFIQMAPQYFFFNLPPSESKDILQNIL
DNGAEHYKAKKLQKSPSLESIPEVTASCVIQ
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagggcataaccggagagaagtattgggaggatagagtagccttcgaaacagaa
ggagcaggtcaagaagttgtagaatatggtgatgttttggagcttaatcgatttgacgga
ctaccctactcctctcgatattacacattactgaaggaaaggatggatctgccagtttgg
aaagccaagtgtgatttcatggacaagctggccaacaggcagtttattattgtctctggc
acggcaagaactggcagaagctctcagtggggagtactgaaccggtgcacacttcaggag
aaaagagagatgttcaaactgatcccccagtggtgtgcagagttctgcctggctgtccag
taccagaatggcatggtggtgtgcacccaggtccacaggcaacatacagtggatctggcc
ctgcgtgtcgctgatgagatggacgtcaacatcggccatgaagtgggctacagcatcccc
ctagagacatgctgctctggtgacactgttctcaggtactgcactgatgacatgctgctc
agagagatgatgtcagaccccatgctggagcactacggtgtcatcgtcatcgaccaagcc
cacgagaggacggtcagtacagatgttctactgggccttctcaaagacatcaccctgcag
aggcccgagctccgtgtggtgctcctcacagctacacacccaggacccaaactactgggc
cactacaagaatgtcccactgatccagctggagggggtatgttcagcggaggtggtgtat
actggtaccagccacaaggactacttctgctctgccctgcgtctggttctggagatacac
cactcccaagaggaaggggatatagtcgtgtttttggccacaactcaagagatagatctt
gcccgtgatatcctccttcgcgaggaggccaatatacccacacatctaggggaacttctc
cctatctcggtgcaccctgggctgggtggaactctacccatgccgggtgaagaggaaggc
cggtgcagaagagtattcctcacctccagtccaaatgaagacctcttttgggctgtgcac
atgctgaactttgtcattgatgccggtgtccagaaaagaaatgtttataaccctaggatc
agggcgaactcagtcgccattcaacctatcagtcggatccaagcagaaagccgcaaacag
cttgtaggaccaacagggaagactttttgtctgtacccagaggacacacccctgcccagt
gaaacacgcccccacatccttgagtctgacatcacatccacagtgctcttcctgaagagg
atggacatcggcggtctgggccgctgtgactttatcgacaggccagatcctgagggtctg
atgcaggccttggaggaactggactatctagcagccctggatgacgatgggaacctgtcg
gagatcggcatcatcatgtctgagttccccctggagccccagatggccaagacactacta
gcctcctgcgagtttgactgtgtcaacgaggtggtcaccatcgctgccatgctgacagca
ccaagctgctttctggtcccctcaagggagttgaggctagaggcctctcagtgtcacctg
aagttccagcacccagagggagaccacttcaccctcatcaacatctacaaggctttcaaa
cagaaccagcatgagccctttgtcagtgtggagaagtggtgtcaggactacttcctgagt
ctgtctgccctgcagacggctgatgctatccgctctgagctgactgacatcctgaggagg
atagagctgcctgtctccatgccttcctttggctccaagggaaacactctcaacattaag
agagcgctgctagctggcttcttcatgcaggtggcaagggatgtggattcatcggggaat
tacttcatgttgacacacaagcacgtggcccagatccaccctttctctgcctacggcacc
aagacacccaaactgggcctgccggagtgggtcctcttccatcagtactccttctcagag
gacaactgcatccgtaccgtgtcccacatatccccagaggagttcattcagatggctcca
cagtacttcttcttcaacctgcctcccagcgagagcaaggacatcctccagaacatctta
gacaatggagctgaacactacaaagcgaagaagcttcaaaagagccccagcctagagagc
atacccgaagtcaccgccagttgtgtcatacagtga
DBGET
integrated database retrieval system
