Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139381144
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Entry
139381144 CDS
T10872
Name
(RefSeq) myomesin-2-like
KO
K24495
myomesin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139381144
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
139381144
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
139381144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Ig_2
Ig_DSCAM-DSCAML_C
ig
Pur_ac_phosph_N
V-set
C2-set_2
C2-set_3
Alpha_kinase
Motif
Other DBs
NCBI-GeneID:
139381144
NCBI-ProteinID:
XP_070980590
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All DBs
Position
23:complement(28771819..28797666)
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AA seq
1428 aa
AA seq
DB search
MAATVARHKHVHVSHDYHSAQSKVVAKQYTSSEVVEDDYHHKQETRIQGVVRKKMVEKYV
REESMIRGPKFLTTLRSHTVWEHTPVKLYCTVEGYPTPFVKWYKDGVSIDLSSMKYNVQD
NVGIHNLEIVKCETDDTAQYTAVASNIHGQVSTQASVIVKRFREEGHLSSYAWLPYTFPM
LPEIKYTKINITFLETFGSVFGTEGDTVTLAATMNISPNLANLQPEAQWFRDDHRLSDSK
WVKIESGRGESKLTLPHLNKDDEGVYTLRMVTKGGDAAHSAFVSCADGPPPVPGSPGAPM
DIKIHDANRDYVIVSWKPPNTTTEGPIIGYFVDRCETGTENWVQCNDSPIKICKYPVPGL
FEGHSYYFRVRAINSKGISKPSRMSDPIAALDPTEFERLHAIKLGGKLDVVTYYDDVEDE
KKVPGTPSKLHAPETDRTYVVLSWKPAPYHGRAPVWYYIEKCLAETGAWQRVNTQVPVRS
PRYAVFDLAEGKQYLFRVLAANMYGSSEASEPTEPIQTQELRGVPSAPGQVVATRQTDTS
LVIQWAEPKEPNNLIGYYIDVCVKGSKDWDSANHKPHKSNKFVVQGLTTGETYVFRVQAI
NELGLSDESQESSPLSVKAALTIPSAPYDIALLACDGESMVLNWKRPVHSGGSPVAEYYI
NKRRHGEHTWREVNIPPIKERLFKVEHLSAGAVYEFMVYGGSLAGLGAPSAPSKAFHCDA
WTMPEPGPAYDMTFCEIRDDSVVVEWKAPVYTGASPITGYFVDFAKKGSDEWHCSNESHA
VSHRYHKVTGLEAGVSYVFRVRAANSEGAGKPSLASNPVVAKAVEGAQEMTCTVDKESGD
IILSFESCQITESSHFVWKKFYKEITDFSKEIVIKTEGSTSKLIFKHPDQGDVGCFSVSV
TNTDGVSASHEIHAEELEKMLAKSYGIRHPVIPLKTQLAYKILERGRMCFWLQAEHISSA
VTYKFFGNNKELSANDPNHASHNVETGIIEFVLDHFTEDSEGTFTVQIEDGKARGQSSLV
LIGDDFKAALADAEHQRSEYIRVKEGPHFSEFLSVHVGDDCSVALICKVDNLKTETALHW
FKDDVEITPEGPASLASGACKFPISLFSKASTGIYKATISDDRGKDQSQIEISGHAFDEI
IEKLSKLAGSSAAELAIYCTATGIQLHCHMKYYTEEMKIHWLHAESKLSHSEKVHIGGTP
AMAIMEILEPTEKDKGLYHIQIIDTENTYSRTIDLSGDAYDKAFAEFTTLKEEAYAEANR
GKVLGGLPDVVTIMEKKTLSLTCTVCGDPKPQVTWFKNGAEVYPDDQYLVSLESGKFASL
TIKGVSLENSGRYTMTVQNKYGGESVDIVVSIYKHGDTIPQAKPTLTPKSIIPPKRPIEI
PGPKVVTPSPAPAHVSSPAGAKSPTPPRGLKSPTPARGMKSPTPTKRK
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacagttgccagacacaagcacgtgcacgtcagccatgactaccacagtgca
cagtctaaggtggtagcaaagcagtacacaagctctgaggtggtggaggatgattatcat
cacaaacaagaaacaagaatccaaggagtggtgaggaagaagatggttgagaagtacgtc
cgtgaggagtctatgatcaggggccctaagttcctgaccacactccgatcccataccgtt
tgggagcacactcccgtgaagctatactgcacggtcgagggctacccaaccccttttgtg
aaatggtataaagatggtgtcagcattgacttatcgtcaatgaaatacaatgtgcaggac
aatgttggaattcataacctggagatcgtcaagtgtgaaaccgatgacactgcgcagtac
actgctgtagctagtaacattcatggacaggtctctactcaggcctctgtcattgtcaag
agattcagagaagaagggcatttatcttcctatgcatggcttccttacacatttcccatg
ttgccagagatcaaatacaccaagatcaacatcaccttcctggagacttttggctcggtc
tttggaacagaaggagacacggtcacattggcagccacaatgaacattagccccaaccta
gccaatctgcagcctgaagctcaatggttcagagatgatcatcggctgtcagactccaag
tgggtgaagatagagtctggtagaggcgagtccaagctgaccctgcctcacctgaacaag
gatgatgagggcgtctacactctccgtatggtgacaaaggggggagatgctgcgcacagt
gcattcgtctcctgtgctgatggtccacccccagtacctgggtctccaggtgcccctatg
gacatcaagatccatgacgccaacagagattatgtcatcgtgtcctggaagcctcccaac
accactactgaaggccccattattggatactttgtagatagatgcgaaactggaactgaa
aattgggtgcagtgcaacgactcccccattaagatctgtaaataccctgtgcctggcctt
tttgagggccactcctattacttccgtgtgcgggcgataaactcaaaaggcatcagcaag
ccctccagaatgtctgaccccattgccgccctggacccaactgaatttgaaagactccat
gccatcaagttgggtggtaaacttgacgttgtaacttactacgatgacgttgaagatgag
aagaaggtgccaggaaccccctcaaagttgcatgccccagagaccgaccgaacatatgtt
gtcctcagctggaaacctgccccctatcacggccgggccccagtgtggtactatattgag
aagtgcctagctgagaccggtgcctggcagagggtgaacactcaggtgcctgtgagatct
cctcgttatgccgtgtttgacttggctgagggaaaacagtacttgttccgtgtactggct
gcaaacatgtacggcagcagtgaagcctctgagcctactgagcccattcagactcaagag
ctgcgtggtgtcccctccgctcctggtcaggtggttgccacaaggcaaactgacacatct
cttgttatccaatgggctgaacccaaggagcctaataaccttattggctactacatcgat
gtctgtgtaaaaggctccaaggactgggattcagctaaccacaagcctcacaagagcaac
aaatttgtggttcaaggcctgaccactggtgagacgtatgtcttccgtgtgcaagccatc
aatgagctgggtcttagtgatgaatcacaggagtcgtcccccctctctgtcaaagctgcc
ctcacgattccctctgctccatatgacattgctctgctcgcttgtgatggagagtccatg
gttctgaactggaagcggcccgtccactctggtggctctccggtggctgaatactacatc
aacaaacgcaggcacggagaacacacatggagagaggtcaacatcccacccatcaaagag
aggctgttcaaggttgaacatctgagtgcaggtgcagtctatgagttcatggtttatggt
ggaagtcttgctggtcttggtgccccctctgcccctagcaaggctttccactgtgatgcc
tggaccatgccagagccaggaccagcttatgacatgaccttctgcgagatccgtgatgac
tctgtggtggtggagtggaaggctcccgtctataccggcgccagcccaatcacaggctac
tttgtggactttgccaagaaaggctcagatgaatggcactgttccaatgagagccatgct
gtcagtcaccgctaccacaaggtgactgggctggaagccggagtgtcatatgtgttcaga
gtgcgtgcggcgaactctgaaggtgccggcaagccttccttggcttctaaccctgtggtt
gccaaagcagtggaaggtgcccaggagatgacctgcacagtggacaaagagtcaggtgac
atcatcctgtcatttgaaagctgtcaaattacggagagctcccactttgtgtggaagaaa
ttctacaaggaaatcactgacttctctaaggaaattgtcatcaaaacagagggcagcacc
tccaagcttattttcaagcaccctgaccagggggatgtgggttgcttctctgtttctgta
actaacacggatggtgtttctgccagccatgaaatccatgccgaagagctggagaaaatg
ctggcaaagagctatggtatcagacacccggtgatccctttaaagactcaactggcctac
aagattctggagcgtggtcgcatgtgcttctggctgcaggcggagcacatctcctctgct
gtcacctacaagttctttggtaacaacaaggagctctcagcaaatgatccaaatcatgcg
agtcacaacgtggagactggtatcattgagtttgtgctggatcatttcacagaggatagt
gagggtacctttactgttcagatcgaggatggcaaagccagaggccagtcctctctggtg
ctaattggagatgatttcaaggcagctcttgcagacgcagaacaccaaaggagcgagtac
atcagagtgaaagaaggcccccacttcagtgagtttttgtcagtccatgttggggacgac
tgttctgttgcactcatctgcaaggtggacaatctgaagacagaaacagcgctgcactgg
ttcaaggatgacgttgagattacccctgaagggccagccagtctggcatctggagcctgc
aagtttcctatttccctgttctccaaggcttctactggcatttacaaagctaccatcagt
gatgacagaggaaaggatcagtcccaaattgaaatatccggccatgcctttgatgaaata
atcgagaagctttctaaacttgctggatcctctgcagcagagctggcaatttactgcacg
gcaacaggcattcagctccactgccacatgaaatactacacagaggagatgaaaatccat
tggctgcatgcggaaagtaaactctctcactctgagaaggtgcatattggaggtacccct
gccatggccattatggagatccttgaacccacagaaaaggataagggtctgtaccacatc
cagataatagatacggagaacacctacagtcgcaccattgacctttctggagatgcctac
gataaagcctttgcggaattcacaacactaaaagaggaagcatatgctgaagccaatcgt
ggcaaagtgctgggcggtctgcctgatgttgttaccatcatggagaagaagaccctgagt
ttgacctgcacagtgtgcggagacccaaaacctcaagtcacctggttcaaaaatggtgca
gaggtgtatcccgatgaccagtacttggtgtccctcgagtccggaaagtttgccagtctc
accatcaaaggtgtttccctggaaaactctggcaggtacaccatgacggtgcagaacaaa
tatggaggagagtctgtggatatcgttgtgagcatctacaagcatggtgatacgattcct
caggccaaaccaactctaacgcccaagtcgattatcccacctaaacgtcctattgagatc
ccaggtcccaaggttgtcactccttccccagcccctgctcatgtctcttctccagccggt
gccaagtcccccacccctcctaggggacttaagtcccccaccccagctcgtggcatgaag
tcccctaccccaacaaagagaaagtaa
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integrated database retrieval system
