Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139381213
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Entry
139381213 CDS
T10872
Name
(RefSeq) uncharacterized protein isoform X1
KO
K12494
PH and SEC7 domain-containing protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139381213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139381213
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
139381213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
PH_9
PH
BREX_BrxC_4th
Motif
Other DBs
NCBI-GeneID:
139381213
NCBI-ProteinID:
XP_070980763
LinkDB
All DBs
Position
23:7769492..7821706
Genome browser
AA seq
1620 aa
AA seq
DB search
MSPGVLHKDGGSSPSLTSKSSSRQSVSFQLDLPDNSGPPTHHEQRLPYEGISQLLSNLQP
APNGLQNDSLVLARSSDIEHYHRRVPLSPASSGRITSPSTPTSGRRSYDGSGVGDEGKCS
VVSFSYIEKASIKSVDSPHSAVCPSVLENPFSRGVEEGYMPAHLRKRLSDPVWSDSSGSS
SPKLSCPTSGRSPRSSPCLRRATLDTVAREATYRAMEEFGSPELRRRLAAYSPDRSPSLP
RYYQQQPRCQSWGGSAVLPRGARTLPINAHLIDSDRNRGLNGLPRSPASHQLSVQARQSY
YNFTMSPSSVSCHHGVQNHRLWLGDESPRLSSKCGDHSPRLACKFGDESPRLSSKFRPPL
PAGRPTAIQHEIPASMITSTPTSCDQRASSHTSHRTPSDSPCLPNKVNSKQSGQSNDSKL
GEGLNQTSDRRSNSPATSPHMAHKLAEDATKLSTIFMDRGTPSPTLSQANSTRSESPTSG
YISRESQPYATLHGQGSPAQPHPEANTHTHLQDHRWTDKEFLRAGPHSRESRPGQGQGQA
SPLLLQKGTSSPAMPATLHLVVASHTPITDPRLQRAELLTKDSPTLHRHQPPQYMGDRGS
PSLERRPYDTRFDRGGPRDNPESSRRLIIGLDMEPPESWSSRMQQWRENGSVADREESYS
ESPTADGDEVYVVTKEELQQRRNGAAVLGYQGYKHGVNREQRGETQDHSGALGSSQSSSG
VTGSLGESTQPERDCLSPETSSQSSQKSNDTEETASGMQSESGSSVLGPSLHSQKIARAK
WEFLFGQPIEDSHDSKDSSQAPPSGTSSESPLPTSSLLLKPTGHWRGWDDESQSLSYHDV
QQVVDLVTPPPVTVVGFSPKTGIIRRAINYAETDLDAVPLKCYRETDLDEVILAEAEREQ
EEVDSAFGSNRSVLGTSASSASTIVRTDGEEDELEEDELEEEEEEVVSWASVRMQGDKKR
QHATQEDNQVYSLLLKGCPLDHISDAQSALKSSISVTSPRRTSVDSLDSFSRHFERIMES
HRAKGTSYSSLDSVDLLTSSGPPIFTFDLPTLTPKIQSQICESARHIIELSFAPLAHPEL
PSVSDPTCSENTLAPTGKGLSSTSEQDYTSGGKSRLEKDCLQTNLDLPFIREKPGHWAPD
PLPQQDVGERLALGSTEALANGNKADLQAAKRLAKRLFNLDGFRKSDVARHLSKNNEFSR
MVGEEYLSYFNFSGLTIDQALRAFLREFALMGETQERERVLAHFSRRYLQCNPNAIPSED
SVHTLTCALMLLNTDLHGHNIGKKMSVLQFIGNLEGLNNGKDFPKELLKALYNSIRNEKL
QWTIDEEELRKSFSELADLRTDSASHTMKRIGSGLGVAQNPDALIYKNGFLVRKVHADSD
GKKTPRGKRGWKTFYVMLKGLVLYLQKGEYRPEKQLSEEDLKNAVSIHHSLAMRAADYSK
RPNVFYLRTADWRVFLFQAPNAEQMQSWITRINAVSAMFSAPPFPAAIGSQKKFSRPLLP
GSNTKLSQEEQVKSHETRFRAISSELNELTAVIPDKKSKVRDLEEHKQREEYLEFEKTRY
GTYAMLLRAKIRSGEEDLSLFESRLFDDRGLQRAHSSPTLREEHSSSSQASSAKRGGQQQ
NT seq
4863 nt
NT seq
+upstream
nt +downstream
nt
atgtccccaggagtgttgcataaagatgggggcagcagtcccagcctcacctccaagtcc
tcctccagacaatctgtcagtttccagctggacctaccggacaactccggaccgcccaca
caccacgagcagcgtctgccttatgaggggattagtcagctgctctccaatctccagcct
gcacccaatgggctgcagaatgacagtctggtgctcgcccgctcctcagacattgagcac
taccacaggagggtgcccctatcccctgcctcctctgggagaataacgtccccctcgact
ccaaccagtgggcgcaggtcctacgatggctctggtgtgggagacgagggcaagtgctct
gtggtcagctttagctacatagagaaagccagcattaagtctgtggacagccctcacagt
gctgtgtgcccaagtgtacttgagaaccctttcagtagaggtgtggaggaggggtatatg
cctgcccaccttaggaagaggctcagtgaccctgtgtggtcggatagctccggtagctcc
agccccaaactgtcctgtcccacctcgggcaggtcccccaggagctccccctgcctccgc
agggccactctggacactgtggccagagaggccacctacagggccatggaggaatttggc
tccccggaactaaggcgcagactggcggcctacagcccagacagaagccccagcctgcct
cggtactaccagcagcagccccgctgccagtcctggggtgggtccgcggtcctgcctagg
ggtgccagaacgctgccaatcaatgcacacctcatagactctgacaggaaccgtggtttg
aatggcctccccagaagcccagcttctcaccagctctctgttcaagccaggcagtcctac
tacaacttcaccatgtccccttccagtgttagctgccaccatggtgtccagaaccacagg
ctgtggctaggggacgagagccccaggctgtcctcaaaatgtggggaccacagccccagg
ttggcctgcaagtttggggacgagagcccaaggttgtcttccaagtttcgcccaccatta
cctgcaggcaggcccactgcaattcagcatgaaataccagcaagcatgattaccagcacc
ccaacctcttgcgatcagagggctagcagccacaccagccaccgcactcctagcgatagc
ccctgcttaccaaacaaggtcaactccaaacagtcaggtcagtcaaatgacagcaagctg
ggagagggattgaatcagaccagtgacagaagaagtaactccccagccactagccctcac
atggcccataagctggcggaggacgcaaccaagctgtccactatcttcatggacaggggg
actccctcccccactctgtcacaggctaactccaccaggtcagagagccccacgtctggc
tacatctccagggagtctcaaccctacgccaccctccatggccagggttctccagcacag
ccccaccctgaagctaacactcacacacacttacaggaccataggtggacagacaaggag
tttcttagagctggaccccactccagagagtctagaccaggtcaaggacaggggcaagcc
tcccccctcctactgcagaagggaacctcctcccctgctatgccagctacgctgcacctg
gtggtagcgtcccacactcctatcacagacccacggctgcagagagctgagctgctgacg
aaagacagcccaaccctgcaccgccaccagcccccacagtacatgggagaccgaggctcc
cccagcctggagaggagaccgtatgacacccgcttcgacagagggggtccgagggacaac
ccggagagcagcaggcgcctgattataggacttgacatggagccgccagagagctggagc
tccaggatgcagcagtggagggagaatgggtccgttgcggacagggaggagtcctatagt
gagagtccgactgctgatggtgatgaagtgtatgtggtgaccaaggaggagctgcagcag
agaaggaatggtgcagctgtgttggggtatcaggggtataaacatggagtaaacagggaa
cagaggggggagacccaggaccatagtggggcactagggtcctcccaaagctccagtgga
gtgacaggcagtctgggggagagcactcagccagaaagggactgtctctctccagagaca
tccagccagtccagccagaagagcaatgacactgaagagacagcatctgggatgcagtcg
gaaagcggatcctctgtgctgggcccatccttgcactcccagaagattgcccgtgccaaa
tgggagttcctgtttggacagcccatagaggatagccatgattctaaagactcatctcaa
gcccccccgagtgggacctccagtgagtctcccttgcccacctcctccctgctcctgaag
cccacaggtcactggaggggatgggatgatgagagtcagagtttatcctatcacgatgtc
cagcaggtggtggatttggtgactccgcccccggtcactgtggttggcttctcgcccaag
acgggcatcatccggagagccatcaactacgctgagacggacttagatgctgtgcccctg
aaatgctatagggaaacagacctagatgaggtgatattggctgaggccgagagagagcag
gaggaggtggactccgcctttgggagtaaccgcagtgtgctcggcacctctgcctccagc
gccagtaccatagtacgcactgacggagaggaggacgagttggaggaggacgagctggag
gaggaagaggaggaggtggtgagctgggccagtgtgaggatgcagggggataagaagaga
cagcatgccacccaggaggacaatcaggtgtacagtctgctgctgaagggttgtcccctg
gaccacatatcggatgcccagtcagccctgaaatcctccatctcagtgactagccctcgc
aggacctcagtggatagcctggactccttcagccgccacttcgaaaggataatggagtct
caccgagccaagggcacctcctacagcagcctggacagcgttgacctcttgacctccagc
ggcccacccatattcacctttgacctgcccaccctcacccctaagatccaaagccaaatt
tgtgagagtgctcgtcatatcatcgagctgagttttgcccccctggcccatccagagctc
cccagtgtgtctgaccccacatgctctgagaacaccctggcacccacaggaaaggggctc
agcagcacctctgagcaggattatacgtcaggagggaagtcccggttggagaaagactgc
ttgcaaactaacttagacttgcctttcatcagggagaagccaggccactgggctccagac
ccgctcccacagcaggacgtgggcgagcgcttagccctgggcagcaccgaggccctggcc
aacggcaacaaggctgacctgcaggctgctaagcgcctagccaaacgcctcttcaacctg
gacggcttcaggaagtctgacgtggccaggcacctgagcaagaataatgaattcagtcgg
atggtgggagaagaatacctcagttacttcaacttttcaggccttactattgaccaagcg
ctaagagccttcctgagggagtttgccctcatgggagagacacaggagagagagcgagtg
ctggcccacttctctaggagatatctacaatgcaaccccaatgcaataccttctgaagac
agtgtccacaccctgacctgtgccctgatgctgctcaacacagacctgcatggccataat
atcggcaagaaaatgtccgtcctgcagttcatcggcaacctggaagggctaaacaacgga
aaggattttcccaaggaactgctcaaggcattgtacaactctatcagaaacgaaaagctc
cagtggaccatcgatgaggaggagttgcgcaagtccttctccgagttggccgatttgcga
actgactccgcctcccacaccatgaagcgaatcggcagtggtctaggcgtggcccagaat
cctgacgccctgatctataagaacggcttcctggtacggaaggtccacgcagactctgac
ggcaagaaaacgcccagaggtaagagaggatggaagacgttttatgtcatgctgaaggga
ctggtcctctacctgcagaagggagagtaccgtccagaaaagcagctgtctgaagaggat
ctgaagaatgctgtgtccatccaccactctctggccatgagggcagcagactacagcaag
aggcccaatgtcttctacctgcgcactgcagactggagagtgttcctcttccaagcacct
aatgcagagcagatgcagtcgtggatcacccgtatcaacgcggtgtcagccatgttctca
gcgccacccttccctgcagccatcggctctcagaagaaattcagccgtccgctgctgcca
ggctccaacaccaagctgtctcaggaagagcaggtgaaatcccatgagacacgtttccgg
gccatctcctctgagctgaatgagttaaccgctgtaattccagacaaaaaatccaaagtt
cgtgatctggaggagcacaagcaacgtgaggagtacctggagtttgagaaaactcgctac
ggtacgtacgccatgctactgagggctaagatccggagtggggaagaggacctgtctctg
ttcgagtcgcgtctctttgacgacaggggtctccagagggcccactccagccccactctg
cgggaggaacacagcagcagcagccaggccagcagtgccaagaggggggggcagcagcag
tag
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