Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139381221
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Entry
139381221 CDS
T10872
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139381221
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
139381221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_KDM3B
PWWP_KDM3B
DUF7030
JmjC
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
139381221
NCBI-ProteinID:
XP_070980781
LinkDB
All DBs
Position
23:62036949..62272616
Genome browser
AA seq
2923 aa
AA seq
DB search
MAMAVETRPELVGKRFLCVGGDEPLDLRDIGRWGWRAGVIRAVTHRDNNHSELTVYVEFD
DLEWEKREWVKVYEDFQVFLLEQQLVWAKRREGTLLVENPQGTKDKHIQWPALTFRPLVG
KATLGSITAVEFFSDRQLDFLSDHGAYQPYQEEVDSLSPVLRDNPQLHEEVRFWLKDQKV
QDIFLQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFSRNMVVMNDQVLEPQNVDPSMI
QMTFLDDVVHSLLKGENIGIQSRRRSRSNQNNSAHTAGGRPTGTTGREQGHYTRAQANSP
RPVMNSSGGAVKQGSGVTTQQGQGQGGSQSQQAPAQHSPCQEQTQHRGPGFSRRKGSDSS
VPDDDFKGDNVDCNERAGRGDFFKSTSSKQVAVNKRRKAEEEEEKKSGLKRLRNETTVRS
DFSESSDSEMSTKRTRTADSSSSSEQNSEEELKGETGQEGHKTQGSKTGKESALTGSLSP
WGEELQKAEFQQSSADREQRSSLRQPQRQGERSPLQQQQAPPLSSSSQGSAPSEGQGECI
MENNSTMKSQTHPQSKDQYTSAEVVSRTQTPSQYIIDITAEDANAHMASRENSEAVSALL
ASQNPSEPSYLSEPSRHLVLNPSVAPPSPLRKSPSECDLRNQTPSVSECDLRNQIPLVSE
CDLRNQTPLVLECDLRNQTPLVLECDLRNQTPLVLECDLRNQAPSVSECDLRNQTPSASE
CDLRNQTPSVCRKPEVKHDIAGSLGSKMGLVHSVVIRPIASVSESAAVVEREKQLYSSML
PCIKNASLADEARKSYKLSPSPDVPKPLPSPEALKPKPLCSPDIVKSKTQSVLETCSKPK
PLTSPEVSKHKGRYPDNTPRSSFKPVLARGTESPGSCTKSPLIIDKNEHFTVYRDPALVR
PNQETNHVSYLHPQLHPLHASCLTPSSTHHLLSGVLSGLPPGPLLGGHPRLDSSGLGHLG
LAHHHPVSQPQTHSHTSASYNQLGLYPIIWQYPNETHSYPPRLNLPGSKWVHPENPVSSE
TNMRRNTASPWLHHQVPVSSSDSLDQLSHVPVPIRPASADPHRSDPHPHRSEPHRSDPHR
LIKINPHASPPLPPAKTAGDLHREDLKGFVDPIRTITLAHLKQEQDRSRTPTGKDSHLHQ
LYLEACNKQQQQRMAQQQQQEAGQRDRASKYKEENRRILQESIEVAPFTAKIRSSETDRE
PNPYPRIPSLPSLPHPYPRIPSLPSLPHPQRPHQEKETEPPAVDLYQFKQQSQHSLPPSN
YFTTLSNSVVNEPPRLYPSKELNSYFDKVSREQESAAASSLSLGGGAAFSSKSLSKPPPL
IKHQADGEGLLGKISEQLNQQVSLSNMQRYRLSTIVSPVSPDLSPSSSQSQTRTHCQTQS
QTQSQTRTHCQTQSQTRTHCQTQSQTRTHCQTQAQLRCMPALHRAPVFHPPIQQTLDRKE
VGYGRLSPPTLTPIQPVSSAGKVSEQQKPPTLLPELREVSAVCKGGAAMNSSEVWRAGDS
QSHENLGWHSERSPGRKPGATTASVIVRPSTCIKYDGSPGAKTSSSAKDSLTGRMFPGGR
PQTVCLKLAYERDRESGGKVILPNTNLEEAVCVQQYNNNFMRVSQSQGTFPVSVSASANS
VCNRSSDVTRAVSNMAPYGGLSRRQERTYCGPNTSSASRTESCGPRGRAFHSGPGLEPRA
ELQQQEGSSSRTSSPNLHPGPSLASSTQASPNPSQSYYGSFIHLKKHKAALAAAQQSRGP
SSSSSGSGPESLIEPSNSKALHISPPPPLASASAQNHRTTASPGPYQAGASPSPGPLPNG
QPAQMNQNQSQPNYHKLKKAWLTRHSEEDRNINTMMKTEEADNPSVSKAVSPSVSEMEMI
KPCTVTLIASTSSDVEMKIEEVKGQEDKMAAEDRSTRRGSKRVYDHDSASESGEDSDASE
SSKQEQRAKRQPKPTYKKKQDDMRRRRGDGEKDEDELKPNGIFRSAREKTKLKLSSNNGI
PRSVLKDWRKVKKLKQTGESFLQDDSCSEIGPNLQKCRECRVVRSKKGEQPAHSPVFCRF
YYFRRLSYSKNGVIRVDGFSTPDQFDEEALSLWAPDVYEENELDPDSSKYILSYIGDQFC
QMVTTENTAATWIKKDAKMAWKRAVRGVREMCDACEATLFNIHWVCHKCGFVVCLDCYKA
KERKTSKDKELYAWLKCVKGQQHGHKYLMPTQIIPGTVLTEVVSAMHLFREKYSIRSPCV
CTGKHNPLLSKLPATNGVSQVLQNVLNHSNKISLCNVKTETGQLNPIQGKAETNGGSSPA
SDTSSDSKLTPPESQSPLHFLADLTEQKSREDKKENKESPLGKVGKEEKVSSLESLHCKA
SSLVSNITEQGSTLRDLLTTTAGKLRLGSTDAGMAFAPVYSTAAQMGKSGRSMPNILDDI
IASVVENKIPASRGAKLSLKLEATTTTTEDREVKTERIERKKQPGTGTGPNPGTGPNPGT
GPNPGTGPNPGTGPNPGTGPNPGTGPNPGTGTGPNPGTGPNPGTGTGPNPGTGTGPKPGT
GTEELPEPKPQLEKALQLHADIPHCWLYDRRLLWLKDHRHPGNWKLFRECWRQGQPVLVT
GLHKPLNAALWKADSFNLEFADHQGDLLNCKDGLVSNSGINEFWDGFEDLTKRPKSKDGD
TVVYRLKDWPSGEEFMALMPSRYDDLMRNLPLPEYCDPEGNLNLASHLPSFFVRPDLGPR
LCCAYGVAASQEQDFGTANLHREVSDIVSVLVYVGVAKGNGVLSKTGVLKRLEEEDLDDS
VKKRLKDSSETPGALWHIYISKDVEKIKDFLHKVAKEQGAEISAEHDPIREPGWYLSRKL
RQRLWEEHDVQGLTVVQFLGDSVLIPAGALHQVQNLHSCVQVINDFVSPEHVFHSFHLTQ
ELRSSREEPNYEDKLQVKNILFHSVKDALTSLRRYSQEEEENS
NT seq
8772 nt
NT seq
+upstream
nt +downstream
nt
atggccatggcggtggagacgcgaccggagctggttgggaagcggttcctgtgtgtcggt
ggagacgagccgctggatctccgggatatcggccgctggggctggcgagctggggtcatc
cgagccgttactcaccgggacaacaaccattcagagctgacggtgtacgtggagtttgat
gacctggagtgggagaagcgtgagtgggtgaaagtgtacgaggacttccaggtgttcctg
ctggagcagcagctggtatgggccaagaggagagagggcaccctgctggtggagaacccc
caggggactaaagacaagcacatccagtggccagctctgacgttcagacctctggtgggg
aaggctactctgggttccatcacggctgtagagttcttctctgacagacaactggacttc
ctgtctgaccacggagcataccagccctaccaggaggaagtggatagtttgagtcctgtt
ctcagggacaaccctcagcttcatgaagaggtcaggttctggctcaaagatcaaaaggtt
caggacatttttttgcaaggtccgtattcattaaatggttaccgagttcgtgtttacaga
caagactcggccactcagtggttcacagggatcatcacacatcatgacctcttcagccgt
aatatggttgtgatgaatgaccaggttctagagccccagaatgttgacccctctatgatc
cagatgacctttctggacgatgtggtccactctctgctgaaaggagagaacatcggtatc
cagtcccgacgcaggtcccgttccaaccagaacaactctgcccacacagcaggagggaga
cccaccggcaccacaggaagagagcagggtcactacacccgcgcccaagccaacagcccc
agaccagtcatgaactcctctggcggggcggtgaagcaggggtcaggcgtcaccacccag
cagggtcaaggtcagggcgggtcccagagccagcaggccccagcgcagcactccccttgc
caggaacagacgcagcaccgcggacctggcttctccaggaggaagggatctgacagcagt
gtccctgatgatgacttcaagggagacaacgtggactgtaacgagagagcagggagagga
gacttctttaaaagtacgagcagcaagcaggtggctgtgaacaagcggaggaaagcggag
gaggaagaggagaagaaatcaggtttgaaaagactgagaaacgagactacagtgaggtct
gacttctctgagagcagtgactctgagatgtctaccaagagaaccaggacggcagactcc
tcctcttcctcagagcagaactcagaggaggagctaaaaggagagaccggccaggagggg
cacaagacccagggttctaagactgggaaggagtctgctctgacaggcagtctctccccc
tggggtgaggagcttcagaaggcggagtttcagcagtcatcagccgacagggagcagagg
tcatccctgcgacaacctcaacgacagggagaacggtctccactgcaacagcagcaggcc
cctcccctgtcctcctcctcccagggctctgccccctctgagggccaaggggagtgcatc
atggagaacaacagcactatgaaatcccagacccatccccagtccaaggaccagtacacc
agcgctgaggtggtctccaggacccagactccctctcagtatataatcgacatcacagca
gaggacgctaacgcacacatggcctcccgggagaactctgaggccgtctcggccctgctg
gcctcccagaatccatctgagccctcctacctctctgagcccagcagacatttggtgctg
aacccctctgtggcccctccctctccccttcggaagagcccctcggagtgtgaccttagg
aaccagactccctcagtgtcagagtgtgaccttaggaaccagattcccttagtgtcagag
tgtgaccttaggaaccagactcccttagtgttagagtgtgaccttaggaaccagactccc
ttagtgttagagtgtgaccttaggaaccagactcccttagtgttagagtgtgaccttagg
aaccaggctccctcagtgtcagagtgtgaccttaggaaccagactccctcagcgtcagag
tgtgaccttaggaaccagactccctcagtgtgtaggaagccggaggtaaagcatgacata
gctggcagcctgggcagtaagatggggttagtccattcagtggtgatcagacctatagca
tcagtcagtgagtctgctgctgtagtagagcgagagaagcagctatattcctccatgctg
ccctgcattaagaacgcctcattggccgacgaggccaggaagtcgtacaagctaagcccc
tcccctgatgtccccaagcccctcccctccccagaggccctgaagccaaagcccctctgc
tcccctgacatcgtcaagtctaaaacacagagtgttctggagacttgttctaaacccaaa
cccctcacctccccagaggtgtccaagcataaaggccgttacccggacaacacccctcgc
tccagctttaagcccgtcctggcccgagggactgagtcgccaggatcttgcactaagagt
ccgctaatcatcgataagaacgagcatttcaccgtgtaccgggaccctgcgcttgtccgt
cccaaccaggagaccaaccacgtgtcctatctgcacccccagctccaccccctccatgcc
tcctgcctcaccccctcttccactcaccacctcctctccggggtgctctctggcctgcct
ccaggccccttgctggggggtcatccccgactagactcctcagggctggggcacctggga
ctagctcatcaccaccctgtctctcagccccagacacacagccacacctcagcctcatac
aaccagctggggctgtatccaatcatctggcagtaccccaatgagacccactcctatccc
ccaagactcaacctgcccgggtccaagtgggtgcaccctgaaaaccctgtcagttctgag
accaacatgaggaggaacacggccagcccttggctacaccaccaggtccctgtctcctcc
tctgacagcctggaccaactgagccacgtcccggtccccatccgaccagccagcgccgac
cctcaccggtctgacccccatccccaccgttcagaaccacatcgctcggacccccaccgg
ctcatcaagatcaacccccacgccagcccccctctgccaccggccaagaccgctggagat
cttcacagggaggatttgaagggttttgtggaccccatcagaaccatcactctggcccac
ctgaagcaggagcaggaccgcagcagaaccccgaccgggaaggacagtcacctgcaccag
ctctacctggaggcctgtaataaacaacagcagcagaggatggcccagcagcaacaacag
gaagcagggcagagggaccgggccagtaagtataaggaggagaacagacggatcctccag
gagagcattgaggtggcccccttcaccgctaagatccgctccagtgagaccgacagggag
cctaacccctacccccggatcccctcgctcccctccctgccccacccctacccccggatc
ccctcgctcccctccctgccccacccccagcgcccccaccaggagaaggaaacggagccc
cctgctgtagacctgtatcagtttaaacagcagtcccagcacagtctcccccccagtaac
tacttcactaccctgtccaacagtgtggtcaacgagccaccgcgtctctacccctctaaa
gagctcaactcatactttgacaaggtgagcagggagcaggagtctgcagcagcctctagt
ctctctctgggaggaggggcagcgttcagctccaagtccctgtccaaaccccctcctctc
atcaaacaccaggctgatggggagggtctgctagggaagatatcagagcagctgaaccag
caggtaagcctatccaacatgcagaggtatcgtctcagtaccatagtcagccctgttagt
ccagacctctcgccgtcctccagtcagagccagacccgaacccactgtcagacccagagc
cagacccagagtcagacccgaacccactgtcagacccagagccagacccgaacccactgt
cagacccagagccagacccgaacccactgtcagacccaagcccaactaaggtgtatgcca
gcactgcaccgtgcccccgtgttccaccctcctatccagcagacactggacaggaaggag
gtgggctacggccgtttgtctccacccaccctgacccccatccagccagtcagctcggcc
ggtaaggtgtctgagcaacagaaaccgcccacccttctgcccgagctacgggaggtcagc
gccgtgtgtaagggcggggcagcgatgaactcatccgaggtgtggcgagccggcgactct
cagagccacgaaaatctgggatggcattctgagaggagccccggcaggaagcctggggcc
accacggcgtctgttatcgtccgtccctctacgtgtataaagtacgacggctcgccaggc
gccaagacctcttcctcggccaaggactctctgacggggaggatgttcccaggcggcagg
cctcagacagtctgtctgaaactggcctatgagagagacagggagtctggagggaaggtg
atcctgccaaacactaacttggaggaggctgtttgcgtgcagcagtacaataacaacttt
atgagagtgtcccagtctcagggaacctttccagtctccgtctcggcttctgccaactct
gtgtgcaataggagtagtgatgtgactagggcagtctccaacatggctccctacggtggg
ctgagtagaagacaagagagaacctactgtgggcccaacacctccagcgctagcaggaca
gagagctgtggccctcggggcagggccttccactcagggcctgggttagaaccaagggcc
gagctccagcaacaggaggggagctcctccagaacctcatcccccaacctgcaccccggg
cccagcctggccagcagcacccaggcctctcccaaccccagccagtcctactatgggagc
tttatccatctgaagaagcacaaggcagcgttggcagcagcccagcagtccagaggtcct
agcagcagctccagtggtagtggtcccgagagcctgattgagccatctaacagtaaagct
cttcacatctcccctccacctccccttgcctcggcctcagcccagaaccacagaaccaca
gcaagcccaggaccatatcaagcaggagctagccccagccctggccccctccccaatggc
cagccagcccagatgaaccagaaccagtctcaacccaactaccacaagctgaagaaggcc
tggctcaccagacactcagaggaggacaggaacataaacactatgatgaaaacagaggag
gctgataacccctctgtgtcgaaggctgtgagcccctctgtgtctgagatggagatgatc
aagccttgcaccgtcactctgattgcctctacctccagtgatgtggagatgaagatagaa
gaggtcaaaggtcaggaggacaagatggccgctgaggacaggagtacgcggcgtgggagc
aagagggtgtacgaccacgactcggcctcagagagcggagaggactctgacgccagcgag
agcagcaagcaggagcagagggcgaagaggcagcccaaacccacctacaagaagaaacag
gacgacatgcgtaggaggagaggagacggagagaaagatgaggatgagctgaaacccaac
gggatctttaggagcgccagggagaagaccaagctgaaactgtccagcaacaatggtatc
ccccgctctgtgctgaaggactggaggaaggtgaagaagctgaagcagacgggggagtcg
ttcctgcaggatgactcgtgctccgagattggacccaacctgcagaagtgtcgggagtgt
cgtgttgttcgcagcaagaagggggagcagccggctcattcccctgtcttctgccgcttc
tactacttccgccgcctgtcctacagcaagaatggagtgatccgtgtggacggcttctcc
actccagatcagtttgatgaggaggctctgtccctctgggctcctgatgtatacgaggag
aatgagttggacccagactcctccaagtacatcctctcatatataggagaccagttctgt
cagatggtcaccactgagaacactgctgctacatggatcaaaaaagatgccaagatggcc
tggaagagggctgtgagaggggtccgggagatgtgtgacgcgtgtgaagccaccttgttt
aatattcactgggtctgccacaaatgtggcttcgtggtttgtctggactgttacaaggca
aaggagaggaagacctccaaagacaaagagctgtacgcctggctgaagtgtgtcaaggga
cagcagcatggtcacaagtacttgatgccaacacagattatcccaggaactgttctgaca
gaggtggtgagcgccatgcatctgttcagggagaagtacagcatcaggtctccctgtgtc
tgtactgggaaacacaaccctctactcagcaagctgcctgctaccaacggagtctctcag
gttctccagaacgtgttaaaccacagcaacaagatctctctatgtaacgtgaagacagag
actgggcagctgaaccccatccagggtaaagctgagactaacggaggctccagccctgcc
tcggacacctcctctgactccaaactgactcccccggagtcccagagccctctccacttc
ctggctgacctgactgaacagaagtcacgggaagacaagaaagaaaacaaggagtctcct
ctgggtaaggtgggcaaggaggagaaggtcagtagcctggagtctctccactgtaaagcg
tctagcctggtgtctaacatcacagaacagggctctactctaagagacctcctgacgacc
accgctgggaaactacgtctgggctctactgatgctggcatggccttcgctcctgtatac
tccaccgcagcacagatggggaagagcggccgtagcatgcccaacatcctggatgacatc
atcgcgtccgtggtggagaacaaaattcctgccagccgaggagccaagctgagtctgaag
ctggaggccaccaccaccactacagaggacagggaggtgaagacggagaggatcgagagg
aagaagcagcctgggactgggacaggtcctaaccctgggacaggtcctaaccctgggaca
ggtcctaaccctgggacaggtcctaaccctgggactggtcctaaccctgggactggtcct
aaccctgggacaggtcctaaccctgggactgggacaggtcctaaccctgggacaggtcct
aaccctgggactgggacaggtcctaaccctgggacggggacaggtcctaagcctgggacg
gggacagaagagcttcctgaacccaagcctcagctagagaaggccctgcagctccatgct
gacatcccccactgctggttgtatgatcgcagactgctctggctgaaagaccatcgacac
cctggcaactggaagctgttcagagagtgttggagacagggacagcctgtcctggtgact
gggctccataagcctctgaatgcagctctatggaaggcggacagcttcaacctggagttt
gctgaccatcagggagacctgctgaactgtaaagatggacttgtctcgaactctggaatc
aacgagttctgggacggcttcgaggacctcaccaagagacccaagtctaaagacggagac
accgtggtgtacaggctgaaggactggccatcaggagaggagttcatggccctgatgcct
tccaggtatgatgacctgatgaggaatctgcccctgcctgagtattgtgaccctgaaggg
aacctcaacctggcctctcatctgcccagcttcttcgtacgcccagacctcggaccacgc
ctctgctgtgcttatggagtggcagcgtctcaggagcaggactttgggacagccaacctt
cacagggaggtctctgacatcgtctctgtcctggtgtacgtaggagtggccaaggggaac
ggagtcctgtccaagacgggagtgttgaagagactggaggaggaagacttggacgacagc
gtgaagaagagattaaaggattccagcgagacgcctggagccttgtggcacatctacatt
agcaaagatgtggagaaaattaaagactttctgcacaaggttgctaaggagcagggggcg
gagatttcagcagagcacgacccaatcagagagccgggctggtacctgagcaggaagttg
cgtcagcgtctgtgggaggagcatgatgtgcagggcttgaccgtggttcagttcctgggg
gactctgtcctcatcccggccggggcgctgcaccaggtgcagaaccttcacagttgtgtc
caggtgataaatgactttgtgtctccagagcatgtattccactccttccacctgacacag
gaactgagatcctccagagaagagcccaactacgaagataaactacaggtaaagaacatc
ttgttccactctgtgaaggatgcattgacgtcgctgaggaggtacagccaggaggaggaa
gagaactcctga
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integrated database retrieval system
