Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139381228
Help
Entry
139381228 CDS
T10872
Name
(RefSeq) sphingosine-1-phosphate lyase 1-like
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00600
Sphingolipid metabolism
ocla01100
Metabolic pathways
Module
ocla_M00100
Sphingosine degradation
Brite
Enzymes [BR:
ocla01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
139381228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139381228
NCBI-ProteinID:
XP_070980791
LinkDB
All DBs
Position
23:complement(2263292..2277799)
Genome browser
AA seq
568 aa
AA seq
DB search
MDYLSALEVYKEMLLLYLEEGRRLVNTNCEALEPWQIIGATLISTLGAVWVKGFLFQQET
LTSRIKKQCFRLIRKIPFVGAAIQTQLNKALDDMSVSLCTLKEGMNYTKQLPEQGLTQAE
VLDRISEYETLNEVDWENGRVSGAVYWGDQTLTKLLVKVYGDFAWSNPLHPDIFPGVRKM
EAEVVRMTCTLFNGGPNTCGTVTSGGTESILMACKAYRDMAYERGVKHPEIIAPVSVHAA
FDKAANYFGMKLVHIPLDKNTLKVDVKAMRRAISKNTAMLVCSAPQFPHGIIDPIEEVGK
LALKYNIPLHVDACLGGFLIVFMAKANYPLAPFDFRVKGVTSISADTHKYGYAPKGSSVI
LYSDKKYRHYQYFVAPDWQGGIYASPSVAGSRPGGIIAACWATMMHMGEDGYIKATKKII
DTARTIKTEIRKINGVFVFGDPEVSVVAIGSDVFDIFRLSNALTSKGWNLNMLQYPSSIH
ICCTVLHTHEGVAKQLISDIKEQVAVILKNPNEKTTGMGAIYGMAQSIPDRSMVTEISRG
FLDCLYSTEEPKSSQPQKTHMNGNGKAH
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggactatttgagtgccttggaggtgtacaaggagatgctgttgctctacctggaggaa
ggcaggcggcttgtgaacaccaactgtgaggcgttggaaccatggcagatcattggagct
actctcatatctaccttaggagcagtctgggtcaaaggcttcctgtttcagcaagaaacc
ctgacatcccgaatcaagaagcagtgctttcgactcatcagaaaaataccctttgttggc
gcggcaatccagacccagctgaacaaggccctggatgacatgtctgtcagtctttgcaca
ctgaaggagggcatgaactacaccaaacagctgcctgaacaagggctaacgcaagctgaa
gttctagacaggatcagcgagtacgaaacactgaatgaagtggattgggagaatggacga
gtgtccggtgcagtgtactggggagatcagacacttaccaaacttttggtgaaggtgtat
ggagactttgcatggagcaacccacttcacccagacatctttcctggtgtgaggaagatg
gaggcagaggttgtaagaatgacgtgtaccctcttcaacggtgggcccaacacttgtggc
acagtcacctctggaggaactgaaagcatattgatggcatgcaaggcgtacagagacatg
gcctatgagcgcggtgtgaaacatcctgaaatcattgcaccagtcagtgtccatgccgcc
tttgacaaagcagcaaactactttggaatgaagcttgttcacatccccctggacaaaaat
acattgaaagtggatgttaaggcgatgaggagagctatcagcaagaacacagccatgctt
gtatgttccgcaccccagttcccgcatggaatcattgatcctattgaggaagtaggaaag
ctggctttaaagtacaacatccctctgcatgtggatgcttgtttgggagggtttctcatc
gtgttcatggccaaagccaattacccactggctccctttgacttcagggtaaagggtgtg
accagtatatctgcagacacacacaagtatggctatgcccctaaaggttcatcagtgatc
ctgtatagtgacaagaagtacaggcactaccagtactttgtggctccagactggcaaggg
ggcatctatgcgtccccatcagtggcaggatctcggccaggcggtatcatcgcagcgtgc
tgggctaccatgatgcacatgggagaggatggctacataaaggccaccaagaagataatt
gacactgcacgtaccatcaagacagaaatccgtaagataaatggggtgtttgtgtttgga
gaccctgaagtgtccgtggtggcaataggctctgacgtcttcgacatttttcgtttatcc
aacgcactgacttcaaagggttggaatctcaacatgctacagtatccatccagcatccat
atctgttgtactgtactgcacacacatgaaggtgtggccaaacagttaatcagtgacatc
aaagagcaggtggctgtcattttgaaaaaccccaatgagaagaccactggaatgggagca
atctatggcatggcccagtccatccctgacagatccatggtgaccgagatctcccgaggc
ttcttggactgcctctacagcacagaggagcccaagtcgtctcagcctcagaagacccat
atgaatggcaacggcaaggcccactga
DBGET
integrated database retrieval system
