Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139381231
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Entry
139381231 CDS
T10872
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Membrane trafficking [BR:
ocla04131
]
Protein recycling
Others
Others
139381231
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NCBI-GeneID:
139381231
NCBI-ProteinID:
XP_070980795
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Position
23:complement(13890720..13985726)
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AA seq
1266 aa
AA seq
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MEATVPGCCSHCYIAMWMWLFTLTSTLDLIKTEIGCIPSCQLPVIKPAPRELTEVVFDPF
GKVPEGEIVGLAEKSPRCHPFNGRCKEVKVAEYLARVSGDGEVISVRKSEQHFANKSYSR
GFEKRQSREKLSSSDELYQHQSGSGIYIPSATLNKVSVNNTRHNKINCFGRENRLKRREL
SKNKVGASFRSRGRRRKRSFQTAESRATWSGFRWNSEDASTPGQHDELKLISSTFALTGD
SAHNQAMVHSSGQNSSVILMLTKYFDFSLGSVTESSLWRSIDYGTTYEKLNEKVGPKTLL
SYLYVSPNNKRKIMLLTDPEVESSLLISLDEGASYQRYHLAFDILSLLFHPEQEDWILAY
GHDQKLYVSVEFGRRWQLVHESVVPNRFYWSKLGLDQEPGMIHLETSVSDRRSQYITCKL
QNCSEANKGRPFPGFISPDSLVVQDQYVFIQVPMGGRPVHYVSYRRNAFFPMKLPKYILP
KDLQIISTDDNQVVAAVQDWHQNDSYNLYMSEARGLFFTLALENIVSSGGPEGNIMIDLY
EVAGIKGVFLSNKVVEGQVKTFITYNKGRDWHLLQAPTTDLKGTRLYCVQPYCSLHLHLH
VSDNPYTSGNIVSKESAPGIIVASGTIGPELTAYNVSIFITSDAGNTWREVFEEEYSVLF
LNQGGALVAIRHTPLPIRHIWLSFDEGKRWNKYSFTPSPLYVDGVLGEPGEDILIMTIFG
HFSHRSEWQLVKIDFKAIFNRRCNTDDYQTWQLHNDGKVCIMGVKRIFHNLKPDTRCVKT
RDQYISQMSDSCPCTEADFECDYGFERQSDGGCTPVFWFVPSSVSTDCTTGDSFLNTTGY
RKALSNNCTAETLGKYSPRSQRCPRQAPRGLQLVTSEGTLTATMGDNVTFLVFLEESDGS
TTSITLDFGDGTAISYANISSIEDGIKHIYSKVGIYRVAATALNSLGSERVFLYLHVTCL
LEQVQLSAPSVVVRNEAVNLSTVLKPRYVGSVTYYWWFNNHTEPVITLVGGMSFTFSKEG
THTVTVQVSVGNTVLQDKITVAVYEHFKSHVLAFSSNLEAFNPGVPEWRQDISRVVKDSM
VQVTGISGEQLLVSVLPGLPTAAEFCIVPEKRSTEGRMDGKVTHLEQLSLVLLSALNQDL
IQFTLQPGVQINVYATQLSPAPIMDTSESGHNGATVIMLVSVVFVGLAVFVIYKYKRKIP
GINIHTNEREKQQEVIPSVVSIAVPNPEGDMVSTLEHLDTGPDARGIGYLPSHTDVKLSD
ETPHMF
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atggaggcaaccgtacccggctgctgctctcattgttacattgctatgtggatgtggctc
tttaccctaacttccaccctggacttgatcaaaacggagatagggtgcattccatcatgc
caactccccgttatcaagccggctccccgtgaactcactgaagtggtatttgacccattt
ggaaaagtaccagagggtgaaattgtggggttagcagagaagtcaccacgttgtcacccc
tttaatggcagatgtaaagaagtcaaagttgcggaatatttagcgcgcgtctccggtgat
ggggaggtcatttcggtgcgtaaatccgagcagcactttgcaaataaatcatacagccgt
ggatttgaaaaacgtcagagcagggagaaactttccagttctgatgagctttatcagcat
caaagtggctcgggcatatatattccatctgccaccctcaataaagtatccgtcaataac
actagacataataagattaattgttttggaagagaaaatagacttaaacgacgtgaatta
tcaaaaaacaaggttggcgcaagttttaggagccgtggaaggagacgaaagcgtagcttc
cagacggcggagagcagagcaacttggtccggattccgatggaacagtgaagatgcctca
accccggggcaacatgatgagttgaaactcattagttctacgttcgcactcaccggggat
tcagctcataaccaagccatggtgcattcgtccggacaaaatagcagtgtgattctaatg
ctgactaagtactttgacttcagccttggcagtgtcacagagagctctctatggaggtca
atagactatggaaccacatatgagaaacttaatgaaaaggtgggaccaaaaacattacta
agctacttgtacgtgagtccgaataacaaacgaaagatcatgttactgactgacccagag
gtggagagcagcctgctcattagtcttgatgagggcgcatcctatcagaggtaccactta
gccttcgacatcctcagcctcctcttccaccccgagcaggaggactggatcctggcttac
ggccatgaccagaagctgtacgtctctgttgaatttggaagaagatggcagctcgtgcat
gagagtgtagtccccaacagattttactggtcaaaactgggtttggaccaagagccagga
atgattcacttggagaccagtgtttctgatagacggtcccagtatataacgtgtaagctg
cagaactgctcagaggccaacaaaggcaggcctttccctggatttatcagccctgattcc
ttggtcgttcaggaccagtatgttttcattcaggtaccaatgggtggccggcctgtccat
tatgtgtcttacagaagaaatgctttcttcccaatgaagctacctaagtacatattacca
aaggacttgcagataatcagcacagatgataaccaggtggtagcagcagtgcaggactgg
caccagaatgactcctacaacctgtacatgtcagaggcccgaggactcttcttcactctg
gccctggagaacatagtgagcagtgggggaccagagggcaacatcatgatagacctctat
gaggtagcagggataaaaggggtgttcttgtcaaataaagttgtcgagggccaagtgaaa
acgtttatcacttacaataaggggcgagactggcatcttctacaggctccaaccactgat
ctgaagggaaccagactctactgtgtacagccctactgttcattacacctgcatctccat
gtgtctgacaacccgtacacgtctggaaacatagtcagtaaggaatcagctccaggaatt
atagtagcttcaggtaccattgggcccgagcttaccgcctataatgtcagcattttcatc
acctcagatgctggcaacacttggagagaggtatttgaggaggagtatagtgtcctcttt
cttaaccagggtggtgccctagtggccattcgacacacacctctccccatcagacatatc
tggctgagttttgatgagggaaaacgctggaacaaatacagcttcaccccctctcctctc
tatgtagacggggtcttaggagagccaggggaagacattctcatcatgacaatatttggc
catttcagccatcgttctgagtggcagcttgtcaaaatagacttcaaggccatctttaac
agaaggtgtaacacagacgactatcagacctggcagttacacaatgatggtaaagtctgc
attatgggagtgaagagaatctttcataatctgaagcccgacaccagatgtgtcaaaacc
agagatcagtacatctcccagatgtcagactcctgtccatgcaccgaggctgactttgag
tgtgattatggctttgagaggcagagtgatggaggatgcacccctgtcttttggtttgtt
ccatcctccgtgtccacagactgcaccactggggacagcttcctcaacactactggatac
cgtaaggctctatccaataactgcactgcggaaaccctggggaagtatagccctaggagc
cagaggtgtccccgccaggccccgagaggtctgcagctggtcaccagtgaggggacactt
acggccaccatgggggacaacgtcaccttcctggtgtttctggaagagagtgatggctcc
acaacaagtataacattggactttggagacgggacggccatatcctacgctaacatcagc
tccatagaggatggaatcaaacatatatacagtaaagtgggcatttaccgagtggctgcc
acggcactcaacagccttggctctgagagagtctttctatatctacatgttacctgtctc
cttgagcaagtgcagctttcagctccctcggtggttgttaggaatgaagcagtgaatcta
tcaacagtcctgaagccacgttacgttggatcagtcacctactactggtggttcaacaac
cacactgagcctgttataactttagtgggaggaatgtccttcaccttctcaaaggaggga
acccatactgtcaccgtgcaagtgtcagttggtaacaccgtccttcaagacaaaataact
gttgctgtctatgaacatttcaagtcacacgttttagccttctcctctaatctggaggcc
ttcaatcctggtgtgcctgaatggaggcaggacatcagtagagtggtcaaggactccatg
gtccaagtcacagggatcagtggagagcagcttctagtgtcagtgctcccagggttgcca
acggcagcagagttttgcatcgtccctgaaaaaaggtcaaccgaggggagaatggatgga
aaagtgacacatttagagcagctctctctagtcctgctaagtgccctgaatcaagacctc
atccagtttactctgcagcctggggttcagattaacgtctatgccacacaactgtctcca
gctcctatcatggacaccagtgagagtggtcacaatggtgctacagtcattatgctagtg
tcagtcgtatttgtgggtttggcagttttcgttatctacaagtacaaaaggaagatccct
ggcatcaacatccacacaaatgagcgagagaaacaacaggaagtgatcccttcggtggtg
tctatagctgtcccaaaccctgagggggacatggtgagcactttggagcacttggacaca
gggccagatgcacgtggtataggatacctaccatctcacacagatgtcaaactctcagat
gaaactccccatatgttttaa
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