Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139381244
Help
Entry
139381244 CDS
T10872
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 3 isoform X1
KO
K08628
a disintegrin and metalloproteinase with thrombospondin motifs 14 [EC:3.4.24.-]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ocla01002
]
139381244
Peptidases and inhibitors [BR:
ocla01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
139381244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
Reprolysin
ADAMTS_CR_2
ADAMTS_spacer1
Reprolysin_5
Pep_M12B_propep
Reprolysin_3
Reprolysin_2
TSP1_spondin
ADAMTS_CR_3
TSP1_CCN
Reprolysin_4
PLAC
Peptidase_M10
DUF4953
Peptidase_M7
Motif
Other DBs
NCBI-GeneID:
139381244
NCBI-ProteinID:
XP_070980819
LinkDB
All DBs
Position
23:54883594..55018547
Genome browser
AA seq
1295 aa
AA seq
DB search
MAFALDCIYLLMCCSLSLIFLDHKHTVKSHEHLSGKLSEYGLMVPFSTDSHGRYISHVVS
VSGAWASAATGESESEGADAGGGAGASSSPGPGKRRVSRSVPETPSITSGTGQHLFFNVT
VFGKELHLRLKANRRLVAPGAFVEWQEDFEEKAKERLHGGCVFTGDISNMPEATVAISNC
DGLAGLIRTDNGEFFIEPLEKGQQDVEVKGRVHVVYRRSAIKSEPVQTRKDLHNEVTDFG
IADLPGALDLLELKLTESERKRRHAKKDDYNIEVLLAVDDSVVRFHGKEHVQNYVLTLIN
IVDEIYHDESLGTNINIVLVRMIMVGYRQSISLIERGNPSRSLEQVCRWANTQQRRDPDH
AEYHDHAIFLTRQDFGPAGMQGYAPVTGMCHPLRSCTLNHEDGFSSAFVVAHETGHVLGM
EHDGQGNRCSDETSMGSIMAPLVQAAFHRYHWSRCSKQELNRYIHSYDCLLDNPFEHKWP
KLPELPGINYSMDEQCRFDFGVGYKMCTAFRTYDPCKQLWCSHPDNQYFCKTKKGPPVDG
TECAPSKWCFKGHCIWRSSNQPQGHDGNWGSWTKFGSCSRTCGGGVRSRSRTCNNPVPAY
GGRDCPGSTFDYQMCNMEECVGPYEDFRAQQCVQRSNKYHKNTKHTWLPYEHPDEAHKCE
LSCQSKETGEVVVMNQVMHDGTRCSYTDPFSVCTRGECLHVGCDKEVGSYKQEDKCGVCG
GDNSHCRTVKLTLTKTPKKTGMLKMFDIPIGARHIVIEENETSSHIIAVKNQVTGSFILN
AKSGDAKSRTFIDSGLEWEYVFGSGEKETLKTIGPLHEGIVVLVIPQEEDTKISLTYKYI
IHEDLLPVITNNNVLLAELDTYEWALKSWSQCSKPCGGGIQYTKYGCRRKSDSRLVHRNL
CETSKKPKPIRKRCNVNECSQPTWLVEEWNPCSKTCGKIGYQSRVVQCMQALHNGTNRTV
HTKYCTEDKPETRKVCNPSACPAQWRTGAWSQCSVSCGEGIRQRQVVCRATDNTIGHCEG
DKPETVLICKLSPCPGQSSLPPFTKEAMENSTTKTEGVHQIVPENPVHKLSFNEPCLGDK
SIFCQMEVLARYCSIPGYNKLCCESCNRKEGFTTLFSPSPDLHKTGGSSDSDSETGQETS
TQPNPTQPSDSPLPTTTQSPSRTTKTPRRPRSTAQGLTTSPSASAVVPQGPSFGVRDGDL
VPGLPSLPPGPSPPLRPRLRSIASPDSNGDAALSPSKEHSSPNNRSLGQSTGPGPEPGPA
GTVAGVAAARSRREDVGSDSAHRTRTTRTLSHVLT
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atggctttcgctctggattgtatatatttattgatgtgctgttctctcagcttgatattt
ttagatcacaaacatactgtgaaatcacatgaacatctctctggaaagttaagtgaatat
ggtcttatggtgccgttcagcacagactcccacggccgctacatctcccacgtggtctca
gtctcaggagcctgggcctcagctgcaacgggagaaagtgaaagtgaaggtgctgatgca
ggtggtggtgctggtgcttcctcatcccctggtccgggaaagaggcgtgtgtcccgtagc
gtgcccgagacaccctctatcacctctggcacaggccaacacctgtttttcaacgtcact
gtgtttgggaaagagttgcaccttcgcctcaaagcaaacaggaggctggtggctccgggg
gcatttgtggaatggcaggaggacttcgaggagaaggctaaggagcgtctccacgggggc
tgtgttttcactggagacatatccaacatgccagaggccactgttgccataagcaactgt
gatggactggcaggcctgatccggactgataacggggagtttttcatcgagcctctagag
aagggtcagcaggatgtggaggtgaaaggtcgtgtccatgtggtctacaggagatctgcc
atcaaaagtgaaccagtccaaacaaggaaggacctccacaatgaagtgacagactttggg
attgctgacctccccggtgctctggacctcttggagctcaagctgacagagtctgagcgc
aaacggcggcacgccaagaaggacgactacaacatcgaggtgctgctggctgtggacgac
tctgtggtgcgcttccatggcaaggagcacgtacagaactatgtcctcacactcatcaac
atagttgatgagatctaccacgatgagtccttgggaaccaacatcaacatcgtcctcgtc
cgcatgatcatggtcgggtacagacagtccatcagcctgatcgagcgtgggaacccgtcc
cgtagcctggagcaggtgtgtcgctgggccaacacgcagcagcgccgggaccccgatcat
gctgagtaccatgaccatgccatcttcctcacaaggcaagattttggtcccgcaggtatg
caaggttacgccccggtgacaggcatgtgccaccctctgaggagctgcactctgaaccac
gaggacggattctcctcggccttcgtggtggcgcacgagaccggacatgtgttaggtatg
gaacatgacggacaggggaatcgttgttctgacgagaccagcatgggcagcatcatggca
ccactggtccaagcagccttccatcgctaccactggtcacgctgcagtaaacaggaactg
aaccgatacatccactcttatgactgtctcctggacaacccttttgaacacaagtggccc
aagcttcctgagctacctgggattaactactccatggacgagcagtgtcgttttgatttc
ggcgtgggctacaagatgtgcaccgctttccggacctacgatccctgcaagcagctgtgg
tgtagtcaccctgacaaccagtacttttgtaagaccaagaagggtcctccggtggatggg
acggagtgtgcaccgtcgaagtggtgcttcaagggccactgtatctggcgctcctctaac
cagcctcagggccatgacggtaactgggggtcctggactaagtttgggtcctgctccaga
acctgtggaggtggagtacgctcccggagcagaacttgtaacaaccccgtgcctgcgtac
ggcggtcgggattgccccggttccaccttcgattaccagatgtgtaacatggaggagtgt
gtcggaccctacgaggacttccgcgctcaacagtgtgtccagaggagcaacaaatatcac
aagaacaccaagcacacctggctcccttacgaacacccagatgaggctcacaagtgtgaa
ttgagctgtcagtccaaagagaccggtgaggtggtggtcatgaaccaggtgatgcatgat
gggacgcggtgcagctacacagaccctttcagtgtctgcacccggggggaatgtctgcat
gtgggctgcgacaaagaggttggctcgtacaaacaagaagacaagtgtggagtgtgtggt
ggggacaactcccactgtcgcactgtcaaactgaccctcaccaagacaccaaagaaaaca
ggcatgctgaagatgtttgatattccgatcggtgcccggcacatcgttatagaggagaat
gagacttcctcccacataattgctgttaagaatcaagtcacaggcagcttcatattgaac
gcaaaaagtggagatgccaagtccagaaccttcatcgacagcggtttggagtgggagtac
gtcttcggaagcggcgagaaagaaaccctgaaaacaatcggcccccttcacgagggcatc
gttgttctggtcattccacaggaggaggacactaagatcagtctgacatataagtacatt
atccatgaggacctgctgccggtcatcaccaataacaacgttctcctggccgagctggat
acctacgagtgggccctgaagagctggtcgcagtgctctaaaccctgtgggggaggtata
cagtacaccaaatacggatgcaggaggaagagcgacagtcgactggtgcaccggaacctc
tgtgaaaccagcaagaagcccaaacccatccggaagaggtgcaacgtgaacgagtgcagc
cagccaacgtggttggtggaggagtggaacccgtgcagtaagacgtgtgggaagattggc
taccagtccagggttgttcagtgtatgcaggccctccacaacggcaccaaccggacggtc
cacactaagtactgtacagaggacaagcctgagaccaggaaggtctgtaacccctctgcc
tgccctgcgcagtggaggacaggggcctggtcacagtgttcagtaagctgtggagagggg
attcgacagagacaggttgtgtgtagagccacagacaacaccatcggccattgtgaggga
gacaagcctgaaactgtcctcatctgtaaactgagcccgtgtccaggacagtcatcgctg
cccccgttcactaaagaagcgatggagaattcaacgacaaagacggagggtgtacatcag
attgttcctgagaatcctgtccacaaactctccttcaatgagccatgtcttggagacaag
tctatattctgccagatggaggtcctagcccgttactgttccattcctggctacaacaag
ctgtgctgtgagtcctgcaacaggaaggaaggcttcaccaccctcttctctccatcccca
gacctccacaagactggaggatcctccgactcagactctgagactggccaggagacctct
acccagcccaaccccacccaaccatcagactccccgctccccaccaccacccagagccca
tcccgaaccactaagacccctagacggcctcgctccactgctcagggcctgaccacctca
ccatcggcgagtgccgtcgttccccagggtccttcctttggggtcagggatggagacttg
gtccctgggctcccttctctacctccaggtcccagcccgcctctccggccccggctccga
tccatcgcttctccagactccaatggagacgctgctttatcgccatctaaagagcacagc
agtccaaacaaccgctctttaggccaatccaccggccccggccctgaacccgggcctgct
ggaactgtggctggcgttgctgctgccaggtcaagaagggaggatgtaggatcagactcg
gctcacagaaccagaacaaccaggaccctgtcccatgtgctgacatga
DBGET
integrated database retrieval system
