Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139381246
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Entry
139381246 CDS
T10872
Name
(RefSeq) tumor necrosis factor receptor superfamily member 6-like isoform X1
KO
K04390
tumor necrosis factor receptor superfamily member 6
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04010
MAPK signaling pathway
ocla04060
Cytokine-cytokine receptor interaction
ocla04115
p53 signaling pathway
ocla04210
Apoptosis
ocla04217
Necroptosis
ocla05168
Herpes simplex virus 1 infection
Brite
Cytokine receptors [BR:
ocla04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
139381246
CD molecules [BR:
ocla04090
]
Proteins
139381246
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Death
Motif
Other DBs
NCBI-GeneID:
139381246
NCBI-ProteinID:
XP_070980823
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All DBs
Position
23:13550397..13570052
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AA seq
329 aa
AA seq
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MNKYTFLYILCILCTVRLTTPFNAERSSQDILITSKSRTKRQSCQDGTYQHEGMACCLCA
AGQHLESHCSVSPEDGTCVYCEEDRTYNSDPTSLDSCEPCTSCDPKANLEVEDRCTIFKD
SVCRCQQGHYCNKGKEHCRACYPCTICSEEGIKVACSATNNTICHSFKEQGHNLTVVFVL
TTVLLVVLIVIIYLWRSNKYCFGPNGGLTELPNRSSEEMQPLRGVNLWPHLPDIAKTLGW
RDMKQVAECSGMTHTAIESHQLNFPNDSQEQCSSLLRAWVEKEGMTTASETLVQTLLRMK
KKVKAEDIMDIISNKVDGVTGQNSGSGQV
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatatacttttttatatatcctgtgcattttgtgtacggttcgtttaactaca
ccattcaacgcagagcggagttcccaagacatcttaatcactagcaaatcgcgcaccaaa
aggcagagttgtcaagatggcacttaccagcatgagggaatggcatgctgtctctgtgcg
gctggccaacatctagagagccactgcagtgtgagcccagaggatgggacctgtgtttac
tgtgaggaagacaggacctacaacagtgaccccacctctctggactcctgtgagccctgc
acttcctgtgaccctaaagccaatctggaggtggaggacagatgcaccatcttcaaggac
tcagtatgtcgatgccagcagggccactactgtaacaaggggaaggagcactgcagggcc
tgctacccatgtaccatatgcagtgaagagggcatcaaggtagcctgtagcgccaccaac
aacaccatatgccattccttcaaagaacaaggacacaatttgacagtagtatttgtcctg
actactgttcttcttgtcgttttgattgtgatcatttacctgtggcgaagtaataaatat
tgttttgggccaaatggtggtttgacagaactgcccaaccggagttcagaggaaatgcag
ccactgagaggtgttaatctctggccacacctcccagacattgctaagaccttggggtgg
agggacatgaaacaggtggccgagtgcagtgggatgacacataccgccatagaatcacac
cagctgaactttcccaatgactcccaggagcaatgctccagcctactgagggcctgggtg
gagaaagaggggatgaccacagcctctgagacactggtccagactctactccgcatgaag
aaaaaggtcaaggcagaggatatcatggatatcatcagcaacaaggtggatggcgtcaca
gggcaaaactcaggatcaggacaggtgtag
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