Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139381329
Help
Entry
139381329 CDS
T10872
Name
(RefSeq) rho GTPase-activating protein SYDE2-like
KO
K20655
Rho GTPase-activating protein SYDE
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Membrane trafficking [BR:
ocla04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
139381329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139381329
NCBI-ProteinID:
XP_070980880
LinkDB
All DBs
Position
23:60312690..60347743
Genome browser
AA seq
1224 aa
AA seq
DB search
MQKMQNQTMQTQTMQNQTMQNQTMQSQMMQTSVDYNNGYTMQTSVDYNNGYTMQMQEQQN
NDYTIQDDEWDRDLLLDPAWEKQQRKPLSAEKNGEKKRLTEGGSRLSYRRRLETVLPEEA
RDCPTEGGSRLSYQRRLETVIAAKDIQRKSGVIQSASSSSLSTVTTAESEPPTPPTEDST
TTPRTQITVAKKQQWAKLASTPGTEGSHSLLYGACDSDSSSGKAQVSTSKQAWSQKTLVE
AGLDRRRCDDLDWEHQGQCSTSFCEPPPPVHTAVPEFTNPIGGYAEICVSSCMVKSSGSG
AYLQTLDRSSRAWVLSTGKSQAADESYSRLGLPPNCFAELRQRTEGDNNIWYNPIPEEED
VLRGIGGGGGGGGGGVRLDSENPWRRRETEGLSETSRDPQMRSQRRAGMVVSPGTGGGGG
ASRLERHATQNQCPSGGSSPDSAHQTKAITLDSSACSRRDRDGDSPDVIQQIQSEELQSF
GVAGGEVGVSSSGGGVSVPSDSPGAQKKGGVASSMMDRIKSPGMVRKSLSMKMKKLPELR
RKLSLRSSRSHRHGKEGTGRGGGDGGGEGTSPPDIRKEQSNEVISRYHLDTSAPARPQRR
SSRGRSSAASKGGYLSDGDSPELLPKQGGPGGPSSAHNPPLPPPRSTHHSSQEGVTMTSD
LSSFRVYNLSDQPRCAQRVSGLLTVHLVGVEKLLRAPKQDTSKEVFCAIQVDGVTRARTG
LLTSRGGSLPLNHTFNLELERARLLKLVVLTPYPGAETTTMKGSDSTAATRNRVCCLGAV
SIPPLFKASRSQQICVRLEPRGLLYVKLTLLEQWEPPDPRPCHLNPPMVFGVELRHLVDK
ENTAAPVPLLIQKSVAEIQKRGLRVVGLYRLCGSAAVKKELRDAFERDSAAVSLNEEVYP
DINVITGILKDYLRELPSSLITRTLYEVVLEAMSLRPPPSRSSPGTSSPGRSEGDVQRSQ
STVALLQCLPEPERATLSLLLDHLSLVASYSDCNRMNCQNLAVCFGPVLLTPTQESWRPT
SPGQGGRGGSCGRGGRSFSHSEEIASAVDFKRHIEALHYLLQLWPIPTDRVTDNPDSPTL
LQPSSSSDMPPSPPSPMPQNPLPRRCQRGLSLPLDLPGDEVGVVSRRGRGRLESPPCNRY
AGDWSVCGRDFLSGGDADYDEVAGSDSEEEEEEREVKKVEWTQYVDDLVLDFDAPFTCRL
SLKDFDTLISDLERELSKQINICL
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatgcagaaccagacgatgcagacccagacgatgcagaaccagacgatgcag
aaccagacgatgcagagccagatgatgcagacatctgtagactataataatggatacacg
atgcagacatcagtagactataataatggatacacgatgcagatgcaggaacagcagaat
aatgactacaccatccaggatgatgagtgggacagagacctgctcctggaccccgcctgg
gagaaacagcagagaaagcctttatctgcagagaagaacggggagaagaaacgtcttacc
gaaggaggctcgagactgtcctaccgaaggaggctcgagactgtcctaccggaggaggct
cgagactgtcctaccgaaggaggctcgcgactgtcctaccaaaggaggctcgagactgta
atcgctgctaaagacatccagcggaagagtggtgtcatccaaagcgcttcctcctcatcg
ttgtcaacggtaacgacagcggagtccgaacccccgaccccgccaacggaggacagcacc
accaccccacgcacccagataacagtggccaagaaacagcagtgggccaaactggcctcc
acaccaggcacagagggctctcacagcctgctctacggggcttgtgactcggatagcagc
tcaggaaaggcccaggtctcaacctccaaacaggcctggagccagaagacgttagtggag
gccgggctggacaggaggaggtgtgatgatttagactgggagcatcagggacaatgtagc
acctccttctgtgagcctcctccccctgtccacaccgcagtcccagagttcaccaaccct
ataggaggttacgctgagatctgtgtctcctcctgtatggtgaagtcctcggggtcaggg
gcctatctccagaccctggacaggagcagccgagcctgggtactgtccacaggaaagagc
caggctgccgacgagtcctactcgcgtctaggcctcccacccaactgcttcgctgagctg
aggcaacgcacagaaggggacaacaacatttggtacaaccctattccagaggaggaggac
gtgttgcgtggcatcggaggaggtggaggaggaggaggaggtggagttaggttagacagt
gagaacccctggaggaggagggagacagaggggctgtcagagacgtcgagggatccccag
atgaggagccagcggcgggcagggatggtggtgagccctggcaccggtggaggaggaggg
gcctcccgtttagagcgtcatgccacccagaaccagtgcccttcaggtggctccagccca
gacagcgcccatcagaccaaagccatcacattagacagctcagcctgcagtaggagagac
agagacggagacagcccagatgtaattcaacagatccagagtgaggaactgcagtctttc
ggggttgcaggtggagaagtgggtgtttccagctccggaggaggtgtgtcagtcccctca
gacagccccggggcccagaagaaagggggcgtggccagcagcatgatggacaggatcaaa
tccccaggaatggtccggaaatccctttccatgaagatgaagaaactccccgaactccgc
cgtaaactcagcctgcgctcctcgcgctcccatcgccacgggaaggaggggacgggccga
ggaggaggggacggaggtggagaggggacatcacccccagacatccgtaaggagcagtcc
aacgaggtgatcagcaggtaccacctggacacttcggccccggcgagaccacaacgacgc
tcctccaggggacgttcctctgccgccagtaaggggggctacctgagcgacggagactca
cctgagctgctgcccaaacagggtggaccagggggaccctcctcggcccacaacccccct
cttccaccaccccgctccacccaccactccagccaggagggagtgaccatgacctctgac
ctgagctcgttcagagtctacaacttgtcggaccagccacggtgcgcccagcgcgtctcc
ggcctgcttacggtgcatctcgttggtgtggagaaactgctgagggcccctaaacaggac
accagtaaggaggtgttctgtgccatccaggtggatggtgtaaccagggcccgtaccggc
ctgctaacctccagggggggctctctgcccctcaaccacacctttaacctggagctggag
agggccaggctgctgaaactggtggtgctcaccccttaccccggggctgagactaccacc
atgaagggcagcgactccacagcagcgaccaggaacagggtctgctgtctgggggctgtg
tccataccccctctgttcaaagcctctcggtctcagcagatatgcgttagattagagccc
aggggtctactgtacgtgaagctgaccctgctggagcagtgggagcccccagacccccga
ccctgccacctcaacccccccatggtgtttggagtggagctgcgccacctggtggacaag
gagaacaccgctgcccccgttcctctgctcatacagaagagtgtggctgagatccagaag
agaggactgagggtggtgggtctgtaccgtctgtgtggttcagctgcagtgaagaaggaa
ctgagagacgcgtttgagagggacagtgctgctgtcagcctgaatgaagaggtttatcct
gacatcaacgtcatcacaggcattctgaaggactacctacgtgagctgccgtcctccctt
atcaccaggaccttgtacgaggtggttttggaggccatgtctctgagacctcctccttct
cgctcctcccctggaacctcctctcctggcaggagcgagggagacgtacagcgctctcag
agcaccgtggccctactgcaatgtctgcctgaaccagagagggccaccctctcgctgctc
ctggaccatctgagccttgttgcctcctacagtgactgtaaccgaatgaactgtcagaac
ctggctgtgtgtttcggcccggtgctcctgacccccacccaggagtcctggagacccact
tcaccaggacagggcgggcgcggggggagctgtggaaggggcggacggagtttttctcac
agcgaggagatcgccagtgctgtggacttcaagagacacattgaggccttgcattacctg
ttgcagctctggcccattcctacagacagagtgacagacaaccccgactctcccaccctc
ctccagccctcctccagttcagacatgcctccttcccctcccagtcccatgccccagaac
cctctgccgcggcgctgccagcgtggcctgtcgctgcctctggacctcccgggggacgaa
gtgggcgtggtgtcgcgacgtggacggggccgactggagagcccgccctgtaaccggtat
gctggcgactggagcgtgtgtgggcgggacttcctgtccggaggcgatgcggactacgac
gaggtggcagggagcgacagtgaggaagaggaggaagagagggaggtgaagaaggtggag
tggactcagtacgtagacgacttagttctggactttgacgccccgtttacctgcagactg
agtctcaaagactttgatacgctgatatcagacctggagagagagctgtccaaacagata
aacatctgtctctga
DBGET
integrated database retrieval system
