Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139381391
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Entry
139381391 CDS
T10872
Name
(RefSeq) calcitonin-1-like isoform X1
KO
K12332
calcitonin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04080
Neuroactive ligand-receptor interaction
ocla04081
Hormone signaling
ocla04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
139381391
04081 Hormone signaling
139381391
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
139381391
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ocla04052
]
139381391
Cytokines and neuropeptides [BR:
ocla04052
]
Neuropeptides
GPCR binding
139381391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calc_CGRP_IAPP
TA_inhibitor
DUF2894
Motif
Other DBs
NCBI-GeneID:
139381391
NCBI-ProteinID:
XP_070980985
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All DBs
Position
2:complement(50423218..50428459)
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AA seq
139 aa
AA seq
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MVMLKISAFLVAYALVICQMYSSQAAPSRPGIESMTDRVTLTDYEARRLLNAIVKEFVQM
TAEELEQQENEGNEGNSMERPITKRCSNLSTCVLGKLSQDLHKLQTFPRTDVGAGTPGKK
RSAPESERYASYGKTFDSI
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atggttatgttgaagatttctgctttccttgttgcttatgccctggtcatttgccagatg
tacagctcacaagcagccccctccagaccgggcatagagtccatgacagaccgagtcacc
cttacggactacgaggcaagaaggttactcaacgccatagtcaaggagtttgtgcagatg
acagccgaagagctggagcagcaagagaatgaaggcaacgaaggcaatagcatggaaagg
cccattaccaagcgctgctctaacctcagcacctgcgtgctgggcaaactgtcccaggac
ctgcacaaattacaaacgtttccccgcacggacgtgggcgcgggcacgcctggcaagaaa
cgcagcgcgcccgagagcgaacgctatgcaagctacgggaagacatttgacagcatctaa
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