Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139381491
Help
Entry
139381491 CDS
T10872
Name
(RefSeq) homeobox protein SIX3-like
KO
K19473
homeobox protein SIX3/6
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139381491
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
139381491
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
SMN_YG-box
Motif
Other DBs
NCBI-GeneID:
139381491
NCBI-ProteinID:
XP_070981182
LinkDB
All DBs
Position
23:46033446..46036337
Genome browser
AA seq
293 aa
AA seq
DB search
MVFRSPLELYPSHFFLPNFTERPVLLASSTPTRSLEDLSMFALPTLNFSPEQVASVCETL
EETGDIERLGRFLWSLPVAPGACEQINKHESILRARAVVAFHTGNFRDLYHILENHKFTK
DSHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRG
LLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDRAAAAKNRLQHQGIRQNG
MRSLSESGCTPRSSAESPSTAASPTTSISSMTERVDTGTSILSVTSSDSECDV
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggttttcagatcccctttagagctttatccctcccatttcttcctgccaaacttcact
gagcgccctgtgctcttggcgagcagcactcccaccaggtctctagaagacttgtcaatg
tttgcgctaccgaccctcaacttctctccggagcaagtggctagcgtctgtgagacgcta
gaggaaaccggagacattgaacggctgggacgattcctatggtccctgccggtggcaccg
ggagcatgcgagcagatcaacaagcatgagtccatcctgcgagctcgcgcagtggttgct
ttccacacggggaattttcgagacctttatcacatcttggagaaccacaagtttaccaaa
gactcccatggcaaactgcaggccatgtggctggaggcacactatcaggaggccgagaag
ctgcgcggtcgccccttaggaccggttgacaagtacagggtacgtaagaagttccccctg
cccaggaccatctgggacggcgagcagaagacgcactgtttcaaagagaggacgcgcggt
ctgttaagggagtggtaccttcaggacccatatccaaaccccagcaagaaaagggaactg
gcacaagccactggactcactcctacacaggtcggaaattggtttaaaaaccggaggcaa
cgagacagagccgcggcagcaaaaaacaggcttcagcaccagggaattagacagaacggt
atgcggtccctttcagaatccgggtgtactccacgcagctcggccgaatcgccgtcgacc
gcggccagtcctactaccagcatctccagtatgacagagcgagttgacactggaacgtcc
attctttcagtaacatccagtgactccgagtgcgacgtatga
DBGET
integrated database retrieval system
