Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139381499
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Entry
139381499 CDS
T10872
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1-like
KO
K17908
autophagy-related protein 18
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04136
Autophagy - other
ocla04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139381499
04136 Autophagy - other
139381499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139381499
03029 Mitochondrial biogenesis [BR:
ocla03029
]
139381499
Membrane trafficking [BR:
ocla04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
139381499
Mitochondrial biogenesis [BR:
ocla03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
139381499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
WD40_MABP1-WDR62_2nd
WD40
WDR55
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
BCAS3_WD40
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_Vps41
CPSF_A
Beta-prop_NWD2_C
Beta-prop_RSE1_2nd
Beta-prop_HPS5
EIF3I
Motif
Other DBs
NCBI-GeneID:
139381499
NCBI-ProteinID:
XP_070981196
LinkDB
All DBs
Position
23:complement(39635637..39649753)
Genome browser
AA seq
444 aa
AA seq
DB search
MEERKTPDGPGGPQGLISASFNQDTTSLSVGTKSGYRLFSVTSVDKMDCIHEGAECPDVY
IVERLFSSSLVAVVSLSMPRRMNVYHFKRGTEICNYSYSNNILSVRLNRQRLVVCLEESV
YIHNIKDMKLLKTLLNTPHNPSGLCALSVNHGNSYLAYPGSQTIGEIMVYDTNNLSKVTM
IPAHDSPLAALTFNASGTKLASASERGTVIRVFTIPEGQRLFEFRRGMKRYVSISSLSFS
SDAQFLCASSNTETVHIFKLEQHSPSRDGESPTWGAYVGKMFTAASTYLPSQVSDMMHQD
RAFATVRLNMFGLKNVCALSTVQKLPRLLVASSDGHLYIYNIDPQDGGECVLVRKHRLFE
GDEAPQEAQQEEKESEDGRSLPPGPSYAATVSLPSTAPSSTTLTGYSEDGGAEKGDVIPE
HEFAEGPVCLDDENEFPPVSKQTN
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggaggaacggaagacacccgacggtccgggagggcctcaaggcttgatcagcgcctcg
ttcaaccaggacaccacgtctctatcagtgggcactaagtcaggctacagactcttctct
gtcacctcagtggacaagatggactgcatccatgaaggagcggagtgtccagacgtgtac
attgtggagcggttgttctccagcagtctggtggcggtggtcagtctctccatgccccga
cgtatgaatgtctaccacttcaaaaggggaacagagatctgcaactatagctactctaac
aacatcctctcagtccggctcaacagacagaggctggtggtgtgtctggaggagtcagtc
tacatccacaacatcaaagacatgaagctgctgaagacgctgctcaacacgccccacaac
ccctcaggtctctgtgccctctctgtgaaccatggtaactcctacctggcgtaccctggc
agtcaaaccatcggagagatcatggtctatgacaccaacaacctgagcaaggtgacgatg
atcccagcccatgacagtcccctggcagccctcacattcaacgcttcaggaaccaaactc
gccagtgcttccgagaggggtacagtgatcagagtgttcaccatcccagagggacagagg
ctgtttgagttccgtagagggatgaagaggtatgtgagtatcagctcgttgtcctttagt
tcagacgcacagttcctctgtgcctccagcaacacagagacggtccatatcttcaaactg
gaacagcacagccccagtcgagatggcgagtctcctacgtggggtgcctacgtggggaag
atgttcacagcagccagcacctaccttccctcccaggtctctgacatgatgcaccaagac
cgggcctttgccaccgtacgactcaacatgttcggactcaagaacgtatgcgccttgtcc
acggttcagaagctacctcggctgctggtggcatcatcagatggacatctctacatctat
aacattgacccacaggacggaggagagtgtgttctggtcaggaaacacaggctatttgaa
ggagatgaggcgccacaggaagcacaacaggaagagaaggagtcagaggatggaaggtcc
ctcccacccgggccatcatacgctgccactgtgtccctcccctcgactgcaccctcttct
accactctcacaggctactcagaggatggaggggctgagaaaggggatgtgatccctgaa
catgagtttgccgagggtcccgtctgtctggatgatgagaacgagtttcctcccgtcagc
aaacagaccaactga
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