KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139381522
Entry
139381522         CDS       T10872                                 
Name
(RefSeq) vertebrate ancient long opsin a
  KO
K04256  c-opsin
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ocla01009]
    139381522
  09183 Protein families: signaling and cellular processes
   04030 G protein-coupled receptors [BR:ocla04030]
    139381522
Protein phosphatases and associated proteins [BR:ocla01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     139381522
G protein-coupled receptors [BR:ocla04030]
 Rhodopsin family
  Vision
   Opsin
    139381522
SSDB
Motif
Pfam: 7tm_1 7TM_GPCR_Srw 7TM_GPCR_Srv 7TM_GPCR_Srsx 7tm_4
Other DBs
NCBI-GeneID: 139381522
NCBI-ProteinID: XP_070981239
LinkDB
Position
23:complement(4876402..4907939)
AA seq 388 aa
MDNIRIAVNGVSFNETAEIYKPHADPFTGPITHLAPWNFAVLATLMFVVTSLSLFENFTV
MLATYKFKQLRQPLNYIIVNLSVADFLVSLTGGTISFLTNAKGYFFLGNWACILEGFAVT
YFGIVALWSLAVLSFERFFVICRPLGNVRLRGKHAAMGLLFVWTFSFIWTIPPVFGWCSY
TVSKIGTTCEPNWYSNNISNHTYIITFFVTCFIMPLGVIIYCYGKLLQKLRKVSHGRLGN
AKKPERQVTRMVVVMIVAFMVGWTPYAAFSIIVTACPTIYLDPRLAAAPAFFSKTAAVYN
PVIYVFMNKQFRKCLIQLFTGKPVPENMNATSERLGMTGESCTGGEMSAIAARITVCGNT
QPKNEEASPSKCSSFVQLPIPENKVCPM
NT seq 1167 nt   +upstreamnt  +downstreamnt
atggataatataagaattgcagtaaatggtgtttcttttaacgagacagccgagatctac
aaaccacacgctgatccgttcactggtccaataacacatcttgcaccttggaatttcgca
gttttggctacgttgatgtttgttgtaacgtctctgtctctctttgaaaattttactgtt
atgttggccacttacaagttcaaacagctgagacagcccttaaattatataattgttaat
ttatctgtcgctgatttccttgtgtcactcaccggtggaacaataagttttctaacaaat
gccaaagggtatttttttcttggaaattgggcttgcatattggaaggttttgctgtcacc
tatttcgggattgtggctctgtggtccctggcagtcctgtccttcgagcgtttctttgtg
atctgccggcctctggggaatgttcgtcttagggggaagcatgcggcaatgggcctgctg
tttgtctggaccttctccttcatctggacgatccctcctgtgttcggctggtgcagctac
acggtcagcaagatcggcaccacctgcgagccaaactggtactccaacaacatttcaaat
cacacctacataatcaccttctttgtgacctgcttcataatgcccctgggggtgatcatt
tactgctatgggaagctcctacagaagctgagaaaggtgtcccatggcaggctgggtaac
gccaagaaaccggagcgtcaggtgacacgcatggtggtggtgatgattgtggctttcatg
gtgggctggacgccctacgcagccttctccatcattgtcacagcctgtcccaccatctac
ctggaccccagacttgctgctgcacccgctttcttctccaagacggccgcagtctacaac
ccagtcatctacgtcttcatgaacaaacagttcaggaagtgcctgattcagctctttacc
ggcaagcctgtgccagagaacatgaatgcaacgtcggagcgactgggaatgacgggggag
agctgcacggggggcgagatgtcagccatagcagcacgcatcacggtctgcggcaacacc
cagcctaagaatgaggaggcatcccccagcaagtgcagctccttcgtccagctgccaatc
ccagagaacaaagtctgccccatgtag

DBGET integrated database retrieval system