Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139381560
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Entry
139381560 CDS
T10872
Name
(RefSeq) PDZ and LIM domain protein 1-like
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139381560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
139381560
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
139381560
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Paralog
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GFIT
Motif
Pfam:
DUF4749
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
139381560
NCBI-ProteinID:
XP_070981296
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All DBs
Position
23:complement(2301145..2313789)
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AA seq
284 aa
AA seq
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MPLRVVVQGPGPWGFRLVGGKDFEQPLTISRVTHGSMAAQANLCIGDQILAVDGEPTENM
THLQAQNKIKGCLEEMVLSIDRSESKMWSPLSSEEGKTNSYKMNLASEPQEVKRIGSAHN
RSALPFAGFGPKVVTNQYNNPAGLYSSENIKDFNATVDGVKTIGTAANEPSTVSDPSGIL
PPIVADSEVYKMLQENQEADEPPRQSASFKVLQDILESDPDKTSGFKSVKAPATKIGSTV
RHADKLPICDKCGSGIVGLGQDYSMPPAELELMTVQRLSITYRT
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgcctctacgagttgtcgtgcaaggtcctggaccttggggattccgtctagttggtggg
aaagattttgaacaacccttgactatctcgcgggtcactcatggcagtatggctgcacag
gccaatctgtgtatcggggatcagatcctggccgtagatggagagcccaccgagaacatg
actcacctgcaggcacagaacaagatcaagggctgcttagaggaaatggtcctttctatt
gacagatccgaatctaaaatgtggtcaccgctctcttctgaggaaggaaagaccaactct
tacaagatgaatcttgcatctgagccgcaggaggtgaaacgcataggttccgcccacaac
aggagcgccctgccattcgctgggttcggccccaaggtggtaaccaatcagtacaacaac
cctgccggtctgtactcctcagagaatatcaaggacttcaacgcgactgtggatggcgtg
aaaaccatcggcactgctgctaatgagcccagcaccgtctcagatccgtccggtattcta
ccaccaatagtggcagactctgaggtctacaaaatgctgcaggaaaaccaagaggctgat
gagcctcctcgacagtcagcttcattcaaagtgctgcaggatattctggagtcagatcct
gataagacctctggttttaagagtgtgaaagcgcctgccacaaaaattggttcaacagtg
agacatgcagacaagttaccaatctgtgacaaatgtggatcagggattgttggactagga
caagactattccatgcccccagcagaattggagttgatgaccgtgcaaagactgtcaata
acctaccgaacttga
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