Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139381608
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Entry
139381608 CDS
T10872
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-binding protein Ikaros
KO
K09220
IKAROS family zinc finger protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ocla01009
]
139381608
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139381608
Protein phosphatases and associated proteins [BR:
ocla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
139381608
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
139381608
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Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-C2H2_11
DUF6487
zf-H2C2_5
zf-C2H2_REST
CPSF100_C
GAGA
zf-met
Motif
Other DBs
NCBI-GeneID:
139381608
NCBI-ProteinID:
XP_070981362
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Position
23:3011145..3035006
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AA seq
625 aa
AA seq
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MAASNGLLGVSFYWHDTKQELRAAASTXPKQTRPLDKSKQNASVEHRNIEMLGWKEEVQW
RGEGPRAEFHGAAAALRTSAHGAGESWKNFILQTQGIAEYLHRMETEEAQEMSQMPGRDS
PPPNDVSEENDEAMPIPEDLSASSNLQHNNRGDKEGMACNIKVEARCDEENGLAIDMMMN
GEEEEECAEDLRVLDASGAKVNGSHAGGPDSKGPYSSAGGIRLPNGKLKCDICGIVCIGP
NVLMVHKRSHTGERPFQCTQCGASFTQKGNLLRHIKLHSGEKPFKCHLCNYACRRRDALS
GHLRTHSVGKPHKCAYCGRSYKQRSSLEEHKERCHNYLQCMGLQNSIYTVVKEESNQNEQ
REDLSQMGSKRALVLDRLAINVAKRKSTMPQKFVGEKRLSDISFEGCPGELMQPHVIDQA
INSAINYLGAESLRPLIQTSPTSSDMGVMGSMYPLHKPPAEGHGLSAKDSAAENLLLLAK
SKSASSEKDGSPSHSGQDSTDTESNNEERAGVGASGLIYLTNHITSGVRNGVLPLGKEEQ
QRQYEAMRASIKIASEGFKVLSGEGEQVRAYRCEHCRILFLDHVMYTIHMGCHGFRDPFE
CNLCGHRSQDRYEFSSHMTRGEHRY
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggctgccagtaatggtctactgggtgtcagcttttattggcacgatacaaagcaagag
ctaagggctgctgcctccactnnccccaagcagactcgacctctggataaaagcaagcaa
aatgcctcagtcgagcacagaaacattgaaatgttaggctggaaagaggaagtacagtgg
agaggggagggaccgagggcagagttccatggggctgccgcggcgcttcgaacttctgca
catggagcgggggagagttggaagaacttcatattgcaaactcaaggaatagcagagtac
ctgcaccgaatggagacggaggaggcacaggagatgtctcagatgccaggcagggacagc
ccccctcccaatgatgtgtctgaggagaacgacgaggccatgcccatcccagaggacctg
tctgctagctccaatctgcaacacaacaacaggggtgacaaagaaggcatggcctgtaac
attaaagttgaggctcgctgtgacgaggagaatgggctcgccattgacatgatgatgaat
ggcgaggaggaggaggagtgtgcggaagacttgcgcgtgctcgatgcctcgggggccaaa
gtgaacggctcccatgcaggcggccccgacagcaagggcccctactcctcggctgggggt
atccgcctgcccaacgggaagctcaagtgtgatatctgtgggatagtttgcattggcccc
aatgtgctgatggtgcacaagcgaagccacactggagagcgtccattccagtgcacccag
tgtggcgcttctttcacccagaaaggcaacctgctacgtcacatcaagctccactcagga
gagaagcccttcaagtgtcacctgtgcaactatgcctgtcgccggagagacgccctcagc
ggtcacctgcgtacccactctgttggaaaaccccacaagtgtgcctactgtgggcggagc
tacaagcagcgtagctctctggaggaacacaaggagcggtgtcacaactacctccagtgc
atggggctgcagaacagcatctatacagtagtaaaggaagaaagcaaccagaatgagcag
agggaagacttaagccagatgggatctaagagagccttggtgctagacagactagctatt
aatgtagccaaacgtaagagcactatgccacagaagtttgtaggtgagaaacgcctctcc
gacatctccttcgagggttgcccgggggaactgatgcagcctcatgtcatcgaccaggcc
atcaacagtgccatcaactacctgggtgccgagtcactccgaccgctcatccagacctcc
ccaacctcctctgacatgggggtcatgggctccatgtaccccctccacaagccccctgca
gagggccacggcctgtcagccaaggacagcgcagccgaaaatcttctgttgctcgcaaag
tccaagtcagcctccagcgagaaggacggctcccccagccacagtggccaggattccact
gacacggagagcaacaatgaagagagggcaggtgtcggggcctcaggcctcatctacctg
acaaaccacatcacgtccggggtacgtaatggcgtgctgcccctggggaaggaggagcag
cagcggcagtacgaggccatgcgggccagtatcaagattgcctcggaggggttcaaggtg
ctgagtggagagggggagcaggtgagggcatatcgctgtgaacactgccgcatcctcttc
ctagaccatgtgatgtacaccatccacatgggctgccatggcttccgagaccccttcgag
tgcaacctctgtggccatcgcagtcaggaccgttacgagttttcgtcacacatgacccga
ggggagcatcgctactga
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