Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139381686
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Entry
139381686 CDS
T10872
Name
(RefSeq) AT-rich interactive domain-containing protein 5B-like
KO
K25857
AT-rich interactive domain-containing protein 5
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
ARID
139381686
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GFIT
Other DBs
NCBI-GeneID:
139381686
NCBI-ProteinID:
XP_070981487
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Position
23:complement(62457483..62577907)
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AA seq
1240 aa
AA seq
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MEPNSLTWVGSPCGFHGPYIFYKAFGFDIEANPRILSLGDFFLVRCRPGEPLCIAELQLL
WEESTRKQLLSSSKLYFLPEDTPQGRTVSHGEDEVLAVSEKVVVKLQDLVRWTVWDSSGW
SRGLKAAPLKPSEVLQELEKNGQRDTPVLHRYRESTLNSGLNFKYVLKEKTQLGDDGDQK
RVSVLSYPQYCRYRSLLARLKERPASLLTSQVVLALGGVTSLTDHTHILYCRDTFEHPTL
IDNDNVCDEFAPNLKGRPRKKKLSFSQRCDSQNTPAGKETCNTEGKAPAKVKPESKAVLS
RWPKGISRGSSCCKRVSPKGRTGGGGEECPPDEQAFLVALYKYMKERRTPIERIPYLGFK
QINLWNMFQAAETLGGYELITSRRQWKHVYDELGGNPGSTSAATCTRRHYERLILPYERF
TKGEEDKPLPLSKPRKDLTTQQEVPKTKVPTVTQWPKEEQHPQNPQPPRTEQDPCAKGLE
LSPECEEKESSPEEEGVQVKQEVPLPAGEVSRSTSEEEEEEPVAVCIKERVLHQGVSWEN
IKKPPSDTTTLHFFPVDTPTPINHSHPQDQWQKELPDSANPCPQARLDQSGLTEEPQGPN
PGMVGIVGVVLPIRQRSLQSPRAPEDTTDRAQLPGQDHSCYRYSTILYPGRAHSGPGINH
PGTNHPGTNPGTMSDLAKKKLLSQVNGTAPGPSLPNHYAIGPPPPLINTSLAIGNAEESA
CQPIAGCQGSCSTDTAVVKRPSVIQHAQSFKPLFCETGERREREGLNRNMYKPGEPYSPC
DLTQHHPLSHPPPQTRHHPQPHPNSPCDLTQPHPNSPYDLTHPHQTPQPGHITRFLPDFS
PPLHPQNLHSLYNHTETHVSQFISSRERETPLPRDCEAAPGPGGPQFPSSKHPDTVSLGG
YCARINLLTPNLTPHTLRDMTSLVQTSSEDQPTDLSFPKSSPQKPTLSTATPSLHNNPHP
LMPLQDTGRFCRVPPMTMSSSPRQPADPQPNPRGKTLNGQRGGWEDQGLGHKIEELNRPI
LGTKNTSRPQNNVCTARPLKRSLEERENGPPERKIRAVTPMHSSSSSSSCTIRDRDREGH
SEWKVWTPALEGVVPADPQPAPAHSLHLHITSFVEGHKFPFHSSPLFPGGLYPEAFISQI
QDMCEGLGPHRPLGYHPLQYLKNQAGLSPLVPPFAFHSFMMQRQAHSPAHMYRHPMGASY
GELLHHGLHPMSSMSALNTQQHPDISPSQLSSVHPNTKRS
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaactcactcacgtgggtcggctcaccttgcggttttcacggaccttacatt
ttctacaaggcttttgggtttgacattgaagccaatcctcggatcctgtctctgggagac
tttttcctagtgaggtgtagacccggggaaccgctctgcatagcggagctacagctgtta
tgggaagaaagtaccagaaaacaacttttatccagctccaaactttattttctccccgaa
gacacccctcagggacggactgtcagtcacggagaggatgaggtcctggctgtgtctgag
aaggtggtggtgaagttacaggacctggtcagatggactgtatgggactcttcaggctgg
agcaggggcctgaaggctgcacctctaaagcccagtgaggtgctccaagagctggagaag
aatggacagagagacacccccgtcctccaccggtacagagagtcaacactcaacagcggc
ctcaacttcaaatacgttttaaaggaaaagactcaactaggtgatgacggggaccagaag
cgtgtgtcggtgctgtcttacccccagtattgtcgctaccgttccctattggcccggctg
aaagaaagacccgcctccctcctcacctcacaggtggttctggccctggggggcgtgact
tcactcacagaccacacccacatcctgtactgcagggacacctttgaacaccccaccctc
atcgacaatgacaatgtctgtgatgagttcgctcccaacctgaagggccggcctcggaaa
aagaagctgtccttctcgcaacgctgcgactcccagaatacaccagcaggcaaggagacg
tgcaacacagagggcaaggcccctgccaaggtgaagcctgagtccaaggcagtgctgtcc
aggtggcctaaaggaatcagtagaggcagcagctgctgtaagagggtctcccctaaagga
agaacagggggaggaggtgaggagtgtcctcctgatgaacaggccttcctagtagctctg
tataaatacatgaaggagaggaggacgcccatagagaggatcccctacctgggcttcaaa
cagataaacctttggaacatgtttcaagcagcagagacccttggaggatatgagctgatc
acatcgcgccgacagtggaaacatgtttatgacgagttaggaggaaacccaggaagcacc
agcgctgcaacctgcaccagacgacactatgaaaggcttatcctgccctatgagaggttc
actaaaggagaggaagataagcccctccccctatccaaaccccgtaaagacctcaccacc
cagcaggaggtccccaagaccaaggttcccacggtgacgcagtggcccaaagaggagcaa
cacccacaaaacccccaaccccccaggactgaacaggacccctgtgctaaaggcctggaa
ctctcaccagagtgtgaggagaaggaaagtagtccggaggaggagggagtccaggtgaag
caggaggtgcccctgccggctggtgaggtgagcaggagcaccagtgaagaggaggaggag
gagccagtagcggtctgcatcaaggagagggttctacaccaaggagtttcctgggagaac
atcaagaagccaccttcagacaccactacactccacttcttccctgtagacactcccact
ccaataaaccactcccaccctcaggaccaatggcaaaaggagctgcctgactctgccaac
ccatgtccccaggccaggctggaccagtctgggttgactgaggagccccagggccctaac
cctggcatggtgggcatagtgggggtggtgctccccattcggcagaggtccctacagtcc
cccagggctccagaggacaccacagacagagcacagctccctggacaggaccactcctgt
tacagatactctactatactctacccaggcagagcccattctggacctggcatcaaccat
ccaggcaccaaccatccaggcaccaaccctggcaccatgtctgatctagccaagaagaag
ctgctctctcaggtcaatgggaccgcccctgggccatctctgcccaatcactacgccatt
ggcccacccccacccctcatcaacacaagcctggctattggcaacgcagaggagtcggcc
tgtcagccaatagcaggctgtcagggttcctgcagcacagacacagctgtggtcaaacgt
ccgtctgtcatccagcatgcccagagcttcaagccgctgttctgcgagacaggggaaagg
agggagagggagggcctgaacaggaacatgtataaaccaggggaaccctactctccctgt
gacctgacccagcaccatcccctatcccatccacccccccagactagacaccatccccag
ccccaccctaactctccctgtgacctgacccagccccaccctaactctccctatgacctg
acccatccccaccagacgccccaacctggccacattaccagattcctgcctgacttctcc
ccccccctccacccccagaacctccacagtttgtacaaccatacagagacacacgtcagc
cagttcatcagcagcagggagagggagacacccttacccagggactgtgaggctgcgcct
ggcccgggagggccacagttcccctcctctaaacaccccgacacggtgagtctggggggc
tactgtgcccgtataaacctcctgacccccaacctgacccctcacacactaagagacatg
acttctctcgtacagacaagctcagaagaccaacccacagacttaagttttcccaagtcc
tctcctcagaaacctaccctctccactgccaccccctcccttcacaacaacccccacccc
ctcatgcccctccaggatactgggaggttctgtagagtcccccccatgaccatgtcctcc
agccccagacagcctgcagacccccagcctaaccccagggggaagaccctgaatggccag
agaggaggatgggaggaccaggggctgggacacaagatagaggagctaaacagacccatc
ctaggcaccaagaatacgtccagaccccagaacaacgtgtgcacggcgcgcccactgaag
aggagtctggaggagcgggagaacgggcccccagagaggaagatcagagctgtcactccc
atgcactcctcctcttcctcctcctcctgtacaatcagggacagagacagggagggccac
tcggagtggaaggtctggaccccagcgctggagggggtggtaccagccgacccccagcca
gccccggcccacagcctccacctacacatcacctccttcgtggaaggacacaagttcccc
ttccactcctcccccctgttccccgggggcctctacccagaggccttcatctctcagatc
caggatatgtgtgagggcctgggcccccacaggcccctggggtaccaccccctacagtac
ctgaagaaccaggccggcctctctcctctggtcccgcccttcgctttccactccttcatg
atgcaaagacaggcgcacagccccgcccacatgtaccggcaccctatgggagcctcgtat
ggggaactgttgcatcatggtctacaccccatgtcttccatgtctgccctcaacacacag
caacacccagacatcagcccctcacagctctcctctgtccaccccaacaccaaacgatcc
taa
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