Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139381746
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Entry
139381746 CDS
T10872
Name
(RefSeq) ninein-like protein isoform X1
KO
K16477
ninein-like protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139381746
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
139381746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
DUF5580_M
Motif
Other DBs
NCBI-GeneID:
139381746
NCBI-ProteinID:
XP_070981594
LinkDB
All DBs
Position
23:complement(7659618..7692135)
Genome browser
AA seq
1787 aa
AA seq
DB search
MDEEEQNRYVAQLKEEFHSCDTTGTGYLDKEELSALCHKLSLDAHLPLLLDTLLGPHHYA
RVNFEEFKEGFVAVLSRSLDFSTSEEESSYLEPVVPEEVKPKFVKGTKRYGRRSQPDRPD
SELTADSEGSRPFRTEQKESSPAGVRRIKLRRSTSLESVESLKSDEDTGSHKDAIHQTFE
AQGQQKRWKRDSSESTLHSPRPRAEVTDSRMRAVWEELGVGVGGFLNRQELSLVCDHLGL
PDLNPEELDALFRKLDTDLDGRVSLREFQKGLFREGSVPAPTSSSTPIRPNPQHSLQQAF
EERTVRSTSPSLLSATVGQRLLTRLDEGSGCTSPERVIALWTGEGIRNSRDILQTLDFPL
EERVSLSELTLALDNELLVSGNGIHQAALISYKNEIQFLQVLADQACRERDKVKADLEWA
DRRNLQLVSEVDDRHAAIESLNETKIKGLEQEFRDRLTALRSESAQENEVLLQQVEHERA
KLKVEVEVLRAHDASLHEEVCNATQEKGRLEEEGSVLKGKLSETERTISKLQRDLDQLLL
DKFGSLDPNNTGLLNQEERFSEIIKEFELQCRALRDQNDELNSEVDFLKSQGIGRRSRQE
RDTSTHAWSSRRSLTTESDSDDPEMKRGISPMARKKLQVANKNGLGSLESLPGLVVSIET
EMAMGQLKERHSQEVQDLKIELETKVNFYERSLELMRQNMEVERKDISQGFKVEISDLEE
QKAQVEEQVKRLREEVEKLQAQLQRSSGGLGGPGWGTDQERRAQREQAELEQNYAREISN
LVQRLTSEKDQLEAELKLRMDQEVLLVRKEAEQQVSQMKTQQAQHSLMHQLHCECLQEPE
QERHRERLHSTERVSEEQARICSRAAVERKRLEEEHQEEVLQLKEHTASLQKQADLASES
HIQHSQSEAKLEETCGQCSQLQARLEVVCAQLEESTVSLAFHETLTERLTSEQQAVEELG
LVRDRERALFSEVSQLSEELRILRSESETLLQDKETLAENCSRLSSAFIQQQVQLRAKEE
DTATLRGELETVRVALRNEVEQRSRQSAEMVSLKTDRAKLKEELRKRTTTIDRLQSDLDC
VTEELDQWKRAEENLQEALRQERTKVTQIQSTLDLEREETDSLSQENAHYIRLADQLSNQ
IVEMETESSKLRDHITELKAQLSETFNLVSNLRAQLEAKYTEVHHLVSDMKQMAGLLEMA
EALSNKHYREKELRNTQLETKESELHSLRGKAGRIVQLQQALLSSRAEVHGLEEAFEKEK
CRMKEQLVEMEKLVMALEMVMDPASPHRSQLDKVNCENSALKDRLAMLQQDVQRLEVEII
QKKKKLDIVEQEHEKNREEQERHCKENAKYREELLDMSARNLQLSNENAELSSRLRGDQG
AVQMLTERLAQVSQEQEEGAAAARQLQETSTQQERERFHLQAAWQHDKELLERELNTTKE
KLQRLSEVESSLTSLTLKHQWLEQDKERLLREAEERTHKVEMLQDSLRSVDSQTELLRSK
LQAVGQVKTDQDQEVANHQRMLQEAQDKVKELEASMGRLSREKEQLRLAQKHHEEAATMA
LQEECQSLRLRNQELLHEVCQLQGQDFEVQSLTQECLTMKSKQAQLEAAWAEAQDQALRA
ETALTLAQVQHAQQLQQFREQAGLGSREQLAHLQAQLAEERRRGQQLEETLRTQAQKASS
QMGLQQELYEKMMGDMQERMEEVETKLRSVRMILQEKVNQLKEQLAKNAKSDIMLKDLYV
ENSQLMKALQVTEQRQKTAEKNNFILEEKITALNKLLRKIAPASLSA
NT seq
5364 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggaagagcagaaccgctatgtggcccagctgaaggaggagtttcacagctgt
gacaccacaggcactggttacctggacaaggaagagttgtcagccctttgccacaagcta
tccctggatgctcaccttcccctactgttggacaccttgctaggaccacaccactatgct
cgggtgaattttgaggagttcaaagaaggctttgtagctgtgctatcacgctctctggac
ttcagcacctctgaagaggagagcagctacctggagccagttgttcctgaggaagtgaag
cccaagtttgtgaagggaacgaagcgctacggccggcggtcccagccggacaggcctgac
tctgagctcacagctgactcagagggctctcgtcctttcaggacggagcagaaggagtcc
tctcccgctggcgtgaggaggataaaactcagacgctctacttctctagagagtgtggag
agtctcaagtcggatgaggacaccggaagccataaggacgccatccatcagacttttgag
gcacaagggcagcagaagcgatggaagcgggacagttcggagagcacgctccactcccct
aggccgcgggccgaggtgacagacagccggatgagggcggtgtgggaggagctgggggtt
ggagtaggtggctttctgaacaggcaggagctgtccctggtctgtgaccaccttggcctt
ccggacctgaatccagaggagttggacgccctcttcagaaagttggacactgacctggat
gggagggtcagcctcagggagttccagaagggtctcttcagagaggggagtgtcccagct
cccacctcctcctccacccccatacgtcccaacccccagcactcactccagcaggccttc
gaggagcggacggtgcgctccacctctccctctctcctgtctgccactgtgggtcagagg
ctgctgaccaggctggacgaagggtcgggctgcaccagtccagagagggtcatcgccctc
tggaccggcgagggcatacggaacagcagggacatcctacagactctggacttccccctg
gaagagcgggtcagtctgtcggagctcaccctggccctggacaatgagctgctggtcagc
ggcaacggcatccaccaggcagccctcatctcctacaagaacgagatccagttcctccag
gtcctagcagaccaggcgtgtcgggagagggacaaggtaaaggccgacctggagtgggct
gaccggaggaacctccagctggtcagcgaggtggatgacagacacgccgccattgagtca
ctgaatgaaaccaaaatcaagggtctggagcaggagttccgggataggcttacggccctg
cgtagtgaatctgcgcaggagaacgaggtcctgctgcagcaggtggagcatgagcgggcc
aagctcaaagtggaagtggaggtcctacgggcacacgatgccagtctgcacgaggaagtc
tgcaatgccacccaggagaaaggccgtttggaggaggagggcagtgttctgaaggggaag
ctgtcagagacagagagaaccatctctaaactgcagagagacctggaccagcttctacta
gacaagtttgggagcctggatccgaacaacacaggactgcttaaccaggaggagcgcttc
tctgagatcatcaaggagttcgagctgcagtgccgggcgctgcgggaccagaatgacgag
ttgaactcggaggtggattttttaaagagtcaggggatagggaggagatccagacaggaa
agggacacatccacacacgcctggtccagccgacgatcactgactactgagtcagactca
gatgacccggagatgaagagaggcatatctcctatggcgaggaaaaagcttcaagtggcc
aataagaatggcctgggttctctggagagtctgccaggtcttgttgtgagcattgagact
gagatggccatgggacagcttaaggagaggcacagccaagaggtgcaggacctgaagatt
gagttagagaccaaggtgaacttctacgagcgcagcctggagctgatgcggcagaacatg
gaggtggagaggaaggacatctctcagggcttcaaggtggagatcagtgatctggaggag
cagaaggcccaggtggaggagcaggttaagaggctcagggaggaagtggagaagctgcag
gcccagctacagcgcagctccgggggcctgggagggccaggctggggcactgaccaggag
agaagggcccagcgcgaacaggcagagctggagcagaactatgcccgggagatcagtaac
ctggtccagaggctgacctcggagaaggaccagctggaggctgagctgaagctcagaatg
gaccaggaagtgctgctcgtaaggaaagaggcagagcagcaggtgtctcagatgaagaca
cagcaggcccagcacagcctcatgcaccagctacactgtgagtgcctgcaggaaccggag
caggagaggcacagggagaggctccacagcacagagagggtgagtgaggagcaggccagg
atctgcagccgggccgctgtggaaaggaagaggctggaggaggagcatcaggaggaggtt
ctgcagctgaaggagcacacagccagtctgcaaaagcaggctgatctggcctctgagtca
catatacagcacagtcagtcagaggctaaactagaagagacttgcggtcagtgtagtcaa
ctgcaggccagactggaggtggtttgtgcccagctagaggaaagcactgtgtctctggca
tttcatgagactttgaccgagcgcctgacctctgaacagcaagctgtagaggagctgggg
ttggtgagggatagagagagagcgctcttcagtgaggtgtctcagctaagcgaggagctg
cgtattctacggtctgaatctgagacacttcttcaggacaaagaaacgttggcagagaat
tgcagccgtctgtccagtgctttcatacaacagcaagttcaactgagggccaaagaggaa
gacacagcgaccctgaggggggagttggagacggtacgggtggctctgagaaacgaagtt
gagcaacgctcaaggcagtctgctgagatggtctccctgaagacggaccgagcaaagctg
aaggaggagctgagaaaacgcacgacaaccattgaccgtctgcagtcagatcttgactgt
gtcactgaggagttagaccaatggaagagggcagaggagaatctacaggaagccttgagg
caggaacgaaccaaggtcacacagatccaatccactctggacctggagagggaagagacg
gacagtctgagccaggagaacgcccactacatccgcctggcagaccaactctccaaccag
atcgtagaaatggaaacagaatcatccaaactccgagaccacatcacagagctgaaagcc
caactgagtgaaacgttcaacctggtttctaatctaagggcccagctagaggccaaatac
acagaggtacaccaccttgtgtcagatatgaagcagatggcaggtctgttagagatggcg
gaagccctgtctaataagcactatagggaaaaggagctgcggaacacccagctggagacc
aaggagagtgagctgcactccctcagaggaaaagctggcagaattgtccagctccagcag
gcgctgctgtcctctcgggcagaggtccacgggttggaggaggcctttgagaaggagaaa
tgcaggatgaaggagcagctggtggagatggagaagctggtcatggctctggagatggtg
atggaccctgccagtccacacagatctcagctagacaaggtcaactgtgagaacagtgca
ctgaaggacagattggccatgttacagcaggatgtccagagacttgaggtggagattatt
cagaagaaaaagaaactggacatagtggagcaggaacatgagaagaacagggaggagcag
gagaggcattgcaaagagaacgccaaataccgtgaggagctcctggacatgagcgcccgg
aacctgcagctgagcaacgaaaacgctgagttgagctcccgtctccgtggagaccagggg
gcagtccagatgctgacagagcggctggcgcaggtatcccaggagcaggaggagggggcg
gccgcagccaggcagctccaggagacctccacccagcaggagagggagaggtttcacctg
caggcagcctggcagcatgacaaggagctgctggagagagagctcaacaccaccaaggaa
aagctccaacgtttgtcagaggtggagtcctcgctgaccagcctgaccctgaagcaccag
tggctggagcaggataaggagaggctgctgagggaggcagaggagaggacccataaagtt
gagatgctccaggattctcttcgctccgtggactcccagacagagctgcttcgttccaaa
ctccaggctgtgggtcaggtgaagactgatcaggaccaggaagttgccaaccaccagagg
atgctgcaggaggcccaggacaaggtaaaggagctggaggccagcatgggcaggctgagt
agggagaaggagcagctgcgtctggcccagaaacatcatgaggaggcggccaccatggcc
ctacaggaggagtgccagagcctgcgccttcgaaaccaggagctgctccacgaggtgtgt
cagctgcagggccaagacttcgaggtacagagtctgacccaggagtgcttgactatgaag
agcaaacaggcacaactggaggctgcttgggcggaggcacaggaccaggcactgcgggca
gagacagccttgaccctggcccaggtccagcatgcccagcagttgcagcagttcagggag
caggcaggactggggtctagggagcagctggcacacctccaggcccagctggcagaggag
cggcgcagggggcagcagctggaggagaccctccgcacacaggcccagaaagccagttct
cagatgggcctgcagcaggagctatatgaaaagatgatgggggacatgcaggagaggatg
gaggaggtggagaccaagctgaggagtgtgcgcatgattctgcaggagaaggtcaaccag
ctgaaggagcagctggcgaagaatgccaagtcggacattatgctgaaggacctgtatgtg
gagaactcccagctgatgaaggcactgcaggtcactgagcagcggcagaagactgctgag
aaaaataacttcatcttagaggagaagattacagccctcaacaagctccttcgtaagatc
gcccctgcctccctctcggcatag
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integrated database retrieval system
