Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139381752
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Entry
139381752 CDS
T10872
Name
(RefSeq) crossover junction endonuclease EME1
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03440
Homologous recombination
ocla03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
139381752
03460 Fanconi anemia pathway
139381752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocla03400
]
139381752
DNA repair and recombination proteins [BR:
ocla03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
139381752
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
EME1-MUS81_C
ERCC4
Motif
Other DBs
NCBI-GeneID:
139381752
NCBI-ProteinID:
XP_070981602
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Position
23:complement(29692043..29710186)
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AA seq
565 aa
AA seq
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MGSYSDSTSDLDEDLPVYDFLQPRCSLSQASQIHTDQPDLVVLDSSHTDLPIGLADVMMI
SSDDEEEDVPYIPLALRLKQRQEGLEPASSTLSNGQDNHHSSPDLPGGLGLLAPNGHSES
EPLFTSYETLNSHRRKEKGGRPDWDDPEEAALPQLWPPPKPSSWARSTISPAKRKPSKMT
GEEIQGSREVLRRREARERQQGDKEARMLQQERQKAEKAALAEAVKALRPEECIKHMVVS
VDPALLQLEGGGPLLTSLQAMGCSCAIEKQPLPRSVNWVRRTPSTQTGEVLCIPEAHTVM
QVPVDDFINLIHSYTQEQKGGGADCSASLTSWTLGLQARNPGRTPSLVVIDLEKYFRSQK
SQNQKKFRDAVLGDEQAAVKGAVKKRRKKDEGDALPKVSRVEVEEAVVHLQLHTGVQVHF
LSTWKDFSDHIAMATKAVAEAPFKREREKTGFSFYLESEWAGGQKVDKAGKGLLQVWKRQ
IQQLNRVSQDMASAILAAYPSPQLLNQAYSRCKSEREKLSLLSDLLIRRGEGVTSTTRRV
GPELSKRLCLVMTSSDPQQTLDSML
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgggtagctacagtgactccaccagtgacctggatgaggatctccctgtgtatgacttc
ctccagcccagatgtagcctgagccaagcctcccagatccacacagaccaaccagacctg
gtggtcctggacagctctcatacagacctccccatagggttggctgatgttatgatgatc
agtagtgatgatgaggaagaggatgttccctatatccccctggcgctgagactcaaacag
agacaggagggtttggagcctgcatcctccacactcagtaatggacaggacaaccatcac
tcctcacctgaccttcctggtggtttaggcctgttggcaccgaatggtcactcagagtct
gaacctctattcacctcatatgagaccctaaacagtcatcgtaggaaggagaaaggtgga
agaccagactgggatgacccagaggaggcagctctccctcagctgtggcccccgccaaag
ccatcctcctgggctaggagcaccatctcccctgccaagaggaagccctccaagatgact
ggtgaggagatccaggggtccagggaggtgctgaggaggagggaggccagggagaggcaa
cagggggacaaggaggcgcggatgctgcagcaggagaggcagaaggcagagaaggcggcc
ctggcagaggctgtgaaagcactgcgaccagaggagtgcatcaaacacatggtggtgtct
gtggatccagctctgttgcagttggaaggtgggggccctttgctgacgtcactccaggcc
atgggctgcagctgtgccatagagaaacagcccctccctcgcagcgtcaactgggtcagg
agaacacctagcactcagacaggtgaggtgttgtgtatcccggaggcccacacagtgatg
caagtacctgttgatgacttcatcaacctgatccacagctacactcaggaacagaagggt
ggaggtgcagactgtagtgcctctttgacctcctggaccctgggtctgcaggctcgcaac
cctggcaggacccccagtctggtggtcatagacctggagaaatacttcagatcccagaaa
tcccagaatcagaagaagttccgggatgcggtcctgggggatgagcaagcagcagtaaag
ggggcagtgaaaaagaggaggaagaaggatgaaggtgatgcactgcccaaggtgtctcga
gttgaggtagaggaggccgtggtacacctgcagctacacacaggggttcaggtgcatttc
ctgtccacctggaaggatttctctgaccacattgccatggcaaccaaagcagtagctgag
gccccattcaaacgagagagggagaagacaggcttctcgttctacctggagagtgagtgg
gctggaggccagaaagtggacaaggctgggaaaggactgctgcaggtctggaagagacag
atccagcagctgaacagagtcagccaagatatggcctctgccatcctcgctgcctacccc
tctccccagctactcaaccaggcgtacagtcggtgcaagtcagaacgtgagaaactgtca
ctgctatcggacctcctgattcgcagaggggagggcgtgacttccacaactcgccgggtt
ggtcctgagctctccaagcgtctctgcctggtgatgacatcatcagacccccagcagacc
ctggactccatgctttga
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