Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139381763
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Entry
139381763 CDS
T10872
Name
(RefSeq) rho GTPase-activating protein SYDE1-like
KO
K20655
Rho GTPase-activating protein SYDE
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139381763
Membrane trafficking [BR:
ocla04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
139381763
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
Motif
Other DBs
NCBI-GeneID:
139381763
NCBI-ProteinID:
XP_070981615
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All DBs
Position
23:60253518..60306192
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AA seq
1106 aa
AA seq
DB search
MAEPLLKRTFSRLRGKDRSRRKTDPKLNDIQRKSGVIQSASSSSLSTVTTAESEPPTPPT
EDSTTTPRTQITVAKKQQWAKLASTPGTEGSHSLLYGACDSDSSSGKAQVSTSKQAWSQK
TLVEAGLDRRRCDDLDWEHQGQCSTSFCEPPPPVHTAVPEFTNPIGGYAEICVSSCMVKS
SGSGAYLQTLDRSSRAWVLSTGKSQAADESYSRLGLPPNCFAELRQRTEGDNNIWYNPIP
EEEDVLRGIGGGGGGGGGGVRLDSENPWRRRETEGLSETSRDPQMRSQRRAGMVVSPGTG
GGGGASRLERHATQNQCPSGGSSPDSAHQTKAITLDSSACSRRDRDGDSPDVIQQIQSEE
LQSFGVAGGEVGVSSSGGGVSVPSDSPGAQKKGGVASSMMDRIKSPGMVRKSLSMKMKKL
PELRRKLSLRSSRSHRHGKEGTGRGGGDGGGEGTSPPDIRKEQSNEVISRYHLDTSAPAR
PQRRSSRGRSSAASKGGYLSDGDSPELLPKQGGPGGPSSAHNPPLPPPRSTHHSSQEGVT
MTSDLSSFRVYNLSDQPRCAQRVSGLLTVHLVGVEKLLRAPKQDTSKEVFCAIQVDGVTR
ARTGLLTSRGGSLPLNHTFNLELERARLLKLVVLTPYPGAETTTMKGSDSTAATRNRVCC
LGAVSIPPLFKASRSQQICVRLEPRGLLYVKLTLLEQWEPPDPRPCHLNPPMVFGVELRH
LVDKENTAAPVPLLIQKSVAEIQKRGLRVVGLYRLCGSAAVKKELRDAFERDSAAVSLNE
EVYPDINVITGILKDYLRELPSSLITRTLYEVVLEAMSLRPPPSRSSPGTSSPGRSEGDV
QRSQSTVALLQCLPEPERATLSLLLDHLSLVASYSDCNRMNCQNLAVCFGPVLLTPTQES
WRPTSPGQGGRGGSCGRGGRSFSHSEEIASAVDFKRHIEALHYLLQLWPIPTDRVTDNPD
PPTLLQPSSSSDVPPSPPSPMPQNPLPRRCQRGLSLPLPGDEVGVVSRRGRGRLESPPCN
RYAGDWSVCGRDFLSGGDADYDEVAGSDSEEEEEEREVKKVEWTQYVDDLVLDFDAPFTC
RLSLKDFDTLISDLERELSKQINICL
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacccctgctgaaacggaccttctctcggctgcggggaaaggatcgatcccgg
cggaaaacggaccccaaacttaatgacatccagcggaagagtggtgtcatccaaagcgct
tcctcctcatcgttgtcaacggtaacgacagcggagtccgaacccccgaccccgccaacg
gaggacagcaccaccaccccacgcacccagataacagtggccaagaaacagcagtgggcc
aaactggcctccacaccaggcacagagggctctcacagcctgctctacggggcttgtgac
tcggatagcagctcaggaaaggcccaggtctcaacctccaaacaggcctggagccagaag
acgttagtggaggccgggctggacaggaggaggtgtgatgatttagactgggagcatcag
ggacaatgtagcacctccttctgtgagcctcctccccctgtccacaccgcagtcccagag
ttcaccaaccctataggaggttacgctgagatctgtgtctcctcctgtatggtgaagtcc
tcggggtcaggggcctatctccagaccctggacaggagcagccgagcctgggtactgtcc
acaggaaagagccaggctgccgacgagtcctactcgcgtctaggcctcccacccaactgc
ttcgctgagctgaggcaacgcacagaaggggacaacaacatttggtacaaccctattcca
gaggaggaggacgtgttgcgtggcatcggaggaggtggaggaggaggaggaggtggagtt
aggttagacagtgagaacccctggaggaggagggagacagaggggctgtcagagacgtcg
agggatccccagatgaggagccagcggcgggcagggatggtggtgagccctggcaccggt
ggaggaggaggggcctcccgtttagagcgtcatgccacccagaaccagtgcccttcaggt
ggctccagcccagacagcgcccatcagaccaaagccatcacattagacagctcagcctgc
agtaggagagacagagacggagacagcccagatgtaattcaacagatccagagtgaggaa
ctgcagtctttcggggttgcaggtggagaagtgggtgtttccagctccggaggaggtgtg
tcagtcccctcagacagccccggggcccagaagaaagggggcgtggccagcagcatgatg
gacaggatcaaatccccaggaatggtccggaaatccctttccatgaagatgaagaaactc
cccgaactccgccgtaaactcagcctgcgctcctcgcgctcccatcgccacgggaaggag
gggacgggccgaggaggaggggacggaggtggagaggggacatcacccccagacatccgt
aaggagcagtccaacgaggtgatcagcaggtaccacctggacacttcggccccggcgaga
ccacaacgacgctcctccaggggacgttcctctgccgccagtaaggggggctacctgagc
gacggagactcacctgagctgctgcccaaacagggtggaccagggggaccctcctcggcc
cacaacccccctcttccaccaccccgctccacccaccactccagccaggagggagtgacc
atgacctctgacctgagctcgttcagagtctacaacttgtcggaccagccacggtgcgcc
cagcgcgtctccggcctgcttacggtgcatctcgttggtgtggagaaactgctgagggcc
cctaaacaggacaccagtaaggaggtgttctgtgccatccaggtggatggtgtaaccagg
gcccgtaccggcctgctaacctccagggggggctctctgcccctcaaccacacctttaac
ctggagctggagagggccaggctgctgaaactggtggtgctcaccccttaccccggggct
gagactaccaccatgaagggcagcgactccacagcagcgaccaggaacagggtctgctgt
ctgggggctgtgtccataccccctctgttcaaagcctctcggtctcagcagatatgcgtt
agattagagcccaggggtctactgtacgtgaagctgaccctgctggagcagtgggagccc
ccagacccccgaccctgccacctcaacccccccatggtgtttggagtggagctgcgccac
ctggtggacaaggagaacaccgctgcccccgttcctctgctcatacagaagagtgtggct
gagatccagaagagaggactgagggtggtgggtctgtaccgtctgtgtggttcagctgca
gtgaagaaggaactgagagacgcgtttgagagggacagtgctgctgtcagcctgaatgaa
gaggtttatcctgacatcaacgtcatcacaggcattctgaaggactacctacgtgagctg
ccgtcctcccttatcaccaggaccttgtacgaggtggttttggaggccatgtctctgaga
cctcctccttctcgctcctcccctggaacctcctctcctggcaggagcgagggagacgta
cagcgctctcagagcaccgtggccctactgcaatgtctgcctgaaccagagagggccacc
ctctcgctgctcctggaccatctgagccttgttgcctcctacagtgactgtaaccgaatg
aactgtcagaacctggctgtgtgtttcggcccggtgctcctgacccccacccaggagtcc
tggagacccacttcaccaggacagggcgggcgcggggggagctgtggaaggggcggacgg
agtttttctcacagcgaggagatcgccagtgctgtggacttcaagagacacattgaggcc
ttgcattacctgttgcagctctggcccattcctacagacagagtgacagacaaccccgac
cctcctaccctcctccagccctcctccagttcagacgtgcctccttcccctcccagcccc
atgccccagaaccccctgcctcggcgctgccagcgtggcctgtcgctgcctctgccgggg
gacgaagtgggcgtggtgtcgcgacgtggacggggccgactggagagcccgccctgtaac
cggtatgctggcgactggagcgtgtgtgggcgggacttcctgtccggaggcgatgcggac
tacgacgaggtggcagggagcgacagtgaggaagaggaggaagagagggaggtgaagaag
gtggagtggactcagtacgtagacgacttagttctggactttgacgccccgtttacctgc
agactgagtctcaaagattttgatacgctgatatcagacctggagagagagctgtccaaa
cagataaacatctgtctctga
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