Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139381786
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Entry
139381786 CDS
T10872
Name
(RefSeq) homeobox protein HMX3
KO
K09349
homeobox protein Nkx-5
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139381786
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
139381786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
CT_C_D
Motif
Other DBs
NCBI-GeneID:
139381786
NCBI-ProteinID:
XP_070981645
LinkDB
All DBs
Position
23:complement(60111093..60112609)
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AA seq
306 aa
AA seq
DB search
MDNKHSQAKAETAQETRPPAKDSPFSIKNLLNFDSKPSKPKTLLATTKGLLEGGFSLSRI
GDLTFPSFDIPAQRFGLPAHYLERPSAWWYPYALGTSGHHLYRTGGFEKAIVRDTPSTGG
DRDTPELLRKSPDQEDDKNISTDDVVLEESDGDEPKKEVELVDDWRKIKDENSDKKTCRK
KKTRTVFSRSQVFRLESTFDMKRYLSSSERAGLAASLHLTETQVKIWFQNRRNKWKRQLA
AELEAANLSHAAAQRIVRVPILYHENTGSETGSAGNVSVSQSLLTFPHQMYYSHPLVTSV
PLLRPV
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggacaataaacattcacaagcgaaggcagagacggcacaggagacccgtccgcccgct
aaagactcacctttctctatcaagaacctgctcaacttcgacagtaaaccttccaaaccg
aagacgctgcttgccaccaccaaaggactattggaaggaggtttctctctctcccggatc
ggtgatttaacttttcctagttttgacatcccagcccagagatttggattaccggcgcac
tatttggaacgaccgtcggcgtggtggtatccctacgcgcttggcacatcgggacaccat
ctctacaggaccggagggtttgagaaggccatcgtgagagacacaccgtcaacaggcggg
gaccgagacacaccggagctgctgcgaaaatcacccgaccaagaggacgacaaaaacata
agtactgatgatgtcgttctggaggagagcgatggggatgaaccaaagaaggaagtagag
ttggtggatgactggaggaaaattaaagacgagaactcggataaaaaaacgtgtcggaaa
aagaaaacgcggacagtcttttcaaggagtcaggtatttcggttggagtcaacgttcgat
atgaaacggtacctcagtagctcggaacgggcaggcctggcggcatccctacacctcaca
gagacccaggtgaaaatctggttccagaacagaaggaacaagtggaaacgacagttggcc
gcggaactcgaagcggccaatctgagccacgccgcggcccagaggatagtccgcgttccc
atattgtaccacgagaacaccggctcagaaacgggcagcgctgggaacgtgtcagtcagt
cagtctctactaacattccctcatcaaatgtactattcacatccactagtcacatccgtg
ccgctgctgagaccagtttga
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