Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139381795
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Entry
139381795 CDS
T10872
Name
(RefSeq) tetratricopeptide repeat protein 7A-like isoform X1
KO
K21843
tetratricopeptide repeat protein 7
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139381795
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Others
EFR3-PI4KIII alpha complex and associated proteins
139381795
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTC7_N
TPR_14
TPR_2
TPR_19
TPR_CcmH_CycH
TPR_17
TPR_16
TPR_11
TPR_1
TPR_6
Iml2-TPR_39
TPR_Slam
TPR_15
TPR_12
Motif
Other DBs
NCBI-GeneID:
139381795
NCBI-ProteinID:
XP_070981661
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All DBs
Position
23:5520829..5565361
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AA seq
892 aa
AA seq
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MSTFHRENEAAKFIFRRFESAVTPRVSGEYGHRDRSGSRAGMATSRVSFSQYRLEAEIDR
YRAECQWDKIPPIVEQLVAARFHEDDDYGTLLLAEALLEECLQDNLSLLRNATPLTDINQ
PKLSRSKGYLNSILSRGRLVPRHLNEALLLMAKIHYVQGCYHDAQGMCARVGIDELTGDE
QPLYHLRLLAEAFVIKGLSLDHQAVSAASRVRLSEREEECLSCYLRACDTSLVYLQELDK
QMVVNPSSKAAKTGLVPLPLDIDLGFFQQAALQSAYLCLLHRGHLAQGAHQLRRVLRVVE
SRGSQSFRKAAARKLAEVLLSSVSEDSYWAPMSLPPSAWLQREGNAGPKDAMYPSPKPPQ
RYSTDSVFCPQDVVEEAVLLLLITESTASGDAVISRAPDHREERETSLQDATSVYDLLSI
GMARRGQYAMLSECLERAMKFSFNEFHLWHQLGLSLMACGKGVGAVSVLKECARMRPEDP
SLPMLAAKVCIGQLHWLEEAEALSQSVVSMGEEAAEFLSRAYLTVGLCCSLQASDATLKA
DRDGFNRRALQNLHKAHALDPHDAKIALYLSLQLALVRQVAAAMDPLQVALSLRGDDLHS
LHLLTLLLSAQKHHQHALETLTLALSQHPENFNLLFTKVKLEEALYGPGVALQTCQDMLQ
LWQSRYDFTRTSEGDDSSSIHPPEPLPLNRKPSGLHLTLPDFQDSETGSQSGPSIALSRL
EHAMSEVSAISSAHKQGPTYIWTTLERIWLQAGELFMAEGRVKEAQFCVQEAAVLFPNSH
SVLLLRGRLAELKGNQDEAKGLYDEALAIHPNGHRILLHLGQLLVRCGRVGLGEKVLRDA
VQAQSTSHEAWSGLGEALQSQGSSQAPDCFLTALELESSCPIRPFTIIPREL
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacctttcatagggaaaatgaagccgccaaatttattttccgaagatttgagtcc
gcagttactccccgggtatcaggggagtacggtcaccgagacagatcgggatctagagcg
ggcatggcaaccagcagggtctccttctcgcaataccgtctggaagcggagatcgaccgc
tacagagcagagtgccagtgggacaagataccccctatcgtagagcaactagtggccgca
cgatttcacgaagacgatgactacgggacgctgttattggccgaggcccttctggaggag
tgtctacaggacaacctgagtcttttacgcaacgccactcctttgacggacatcaaccag
cccaaactgtcccggtccaagggctacctcaactccatcctgagcaggggacggctggtg
cccaggcacctgaacgaggctcttctcctgatggccaaaatacactatgtccagggctgt
taccatgacgcacagggcatgtgtgcaagggtgggtatagacgagctgacgggggatgag
cagcccctctaccacctgcgtctgctcgcagaggcctttgtcatcaaaggtctgtccctg
gaccaccaggcagtgtcagctgcctcccgtgtccgtctgtctgagagagaggaggaatgt
ctttcctgctacctgagggcctgtgacacctctctcgtttacctgcaagaactcgacaag
cagatggtggtcaaccctagttctaaagcagctaagaccggtttggtccctctaccactg
gacattgacctgggcttcttccagcaggcggctctacagagtgcatacctgtgcctgctg
catagggggcacctggcccagggagcccaccagctgcgcagggtcctcagggtggtggag
tctcgaggctcccagagcttcaggaaggctgcagcgcggaagctggctgaggtgttgctg
agctcggtgagtgaggacagctactgggcgcccatgtctctcccaccctccgcctggctg
cagagagaagggaacgccggcccaaaggatgccatgtacccctctcccaaaccaccccaa
cgctacagtactgacagcgtcttctgtccccaggacgtggttgaggaggccgtgctcctg
ctgctcatcacagagtctacggccagcggagacgcagtcatcagccgcgcccccgaccat
agggaggagcgggagaccagtctgcaggacgccacctctgtctacgacctgctgagcatc
ggcatggccaggagggggcagtatgccatgctgtctgagtgtctggagcgggccatgaag
ttctcatttaatgagttccacctctggcaccagttgggcttgtcactcatggcatgtggg
aagggtgtgggcgccgtgtctgtgctcaaggagtgtgccaggatgagacccgaggacccc
tcactgcccatgttggccgccaaagtctgcatcggccaactgcactggctggaggaggct
gaggccctgtctcagagtgtggtgtccatgggagaggaggctgcagagttcctgtcccgt
gcgtacctgactgtggggctgtgctgcagtctgcaggcctctgacgccactctgaaagct
gatcgggatgggttcaacagacgagcactgcaaaatctgcataaagcccatgcactggat
ccccatgatgctaagattgctctctacctgtctctccagctggctcttgtacgccaggtg
gcagctgccatggatcccctgcaggtggctctgtctctgcgtggggacgacctgcactcc
ctccacctactgacccttctgcttagtgcccagaaacaccaccaacatgccctcgaaacc
ctcacactagcgctcagccaacaccctgagaacttcaatctgctgttcactaaggtgaag
ctggaggaggctctgtatgggccgggcgtagcactccagacctgccaagacatgctgcag
ctatggcagagccgctatgacttcacacgtaccagtgagggggatgacagcagcagtatc
cacccaccagagccacttccactcaaccgcaaacccagtggcctccacctcaccctgcca
gacttccaggacagtgagactggttctcagagcggtccgtctattgctctatcccgcctg
gagcatgccatgtcagaggtgtcagccatcagctccgcccacaaacagggccccacctac
atatggaccaccctggagcgcatctggctgcaagcaggagagttgttcatggcagagggg
cgtgtgaaggaggcccagttctgtgtgcaggaggcagctgtgctcttccccaactcccac
tccgtgctgctgctaaggggccggctggccgagctcaaagggaaccaggacgaggccaag
ggtttgtacgatgaagccctggccatccaccccaacggacaccgcatactgctgcacctg
ggccagttgttggtgcggtgtgggcgtgtgggtctgggggagaaggtgctgcgggatgcg
gtgcaggcccagagcacgtcccacgaggcgtggagcggcctgggggaggccctgcagtca
cagggcagcagccaggctccagactgcttcctcacagccctggagctggagtcctcctgt
cccatcaggcccttcaccatcataccccgcgagttgtga
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