Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139381829
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Entry
139381829 CDS
T10872
Name
(RefSeq) nodal-related 2
KO
K04666
nodal
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04060
Cytokine-cytokine receptor interaction
ocla04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
139381829
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
139381829
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ocla04052
]
139381829
Cytokines and neuropeptides [BR:
ocla04052
]
Cytokines
Transforming growth factors (RSTK binding)
139381829
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
PIP5K
VP3-like
Motif
Other DBs
NCBI-GeneID:
139381829
NCBI-ProteinID:
XP_070981735
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Position
23:complement(54710343..54713834)
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AA seq
397 aa
AA seq
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MRSLGVLGVALHASLLILLTQGIHKSRDGVYHGKSRRFATDRRPPGFHHLAPKYMMHLYR
NYKSNLTRPIDVMEKAIAKQADTVKSVMAKSLFHRPRRWTATFDLTTLLADERIQAAELR
FRFPRATRASNITVEIYHHHDYPCRQTQGICQEHQLVGYFSVSSVINSSQHWKVYNLTDP
LLNWLGQEQISRSSMKRRSPNKTERDVYFPNSIHQCVSDRALLVVFSHTGSEEGSQAKAS
LLHTAEQSKFLSTTESKKFRRPKRHRKKRGHSGQRDPPDMRGPEVSSGNIEIDPSLCRRV
DMHVDFNQIGWGSWIVFPKKYNAYRCEGICPSPLGEDLNPTNHAYMQSLLKHYHPERVPS
ACCAPTKMSPLSMLYYENGEMLLRHHEDMVVDECGCL
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgcgttcattaggcgttctaggtgtagcgctacatgcctctctgctcatactgctgact
caaggaattcacaaatctagagatggagtttatcacggaaaatcacgacgctttgctaca
gaccgccgtccacctggattccatcacctggcaccgaagtatatgatgcacctttaccgg
aattacaagtcaaatcttactcggcctatagacgtaatggagaaggccatcgcaaaacaa
gcagacacagtcaagagtgtgatggcaaaaagtttatttcacagaccccgacgctggact
gcaacctttgacctgaccaccttattggccgacgaacggatccaagcagcggagctcagg
ttcaggtttccccgggcgacgagggcttccaacattaccgtggagatctaccatcaccac
gactacccgtgcaggcagacacaggggatctgccaggaacaccagctggtgggatatttc
tctgtctcctctgtgattaactcctctcagcactggaaggtgtacaaccttactgatccg
ctgttgaactggctcggccaggaacagatttccaggagctcaatgaagaggagatcacca
aacaagacagagagagatgtgtacttccccaactctatccatcagtgtgtgagcgacaga
gccttactggttgtattctctcatacagggtcagaggagggctcccaggccaaagccagt
ctcctccacacggccgaacagtccaagttcctgtccaccacagagtcaaagaagttccgc
aggccgaagagacacaggaaaaaaaggggccactcaggccagagggatccaccagacatg
aggggtccagaggtgtctagcggaaacattgagattgacccgtctctctgtcgaagagtt
gacatgcatgtagacttcaaccagataggctgggggtcctggatcgtcttcccgaagaag
tataatgcctatcgatgtgaggggatctgtccaagtcctttgggagaagacttgaaccca
acaaatcatgcttacatgcagagtctcctaaaacactaccaccctgagcgggttccctcg
gcgtgctgcgcccccaccaagatgagtcctctaagcatgctgtattatgagaatggagaa
atgctgcttcgccatcacgaggacatggttgtggatgaatgtggctgcctgtag
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