Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139381840
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Entry
139381840 CDS
T10872
Name
(RefSeq) poly(rC)-binding protein 3-like isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139381840
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
139381840
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
MOEP19
Motif
Other DBs
NCBI-GeneID:
139381840
NCBI-ProteinID:
XP_070981749
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Position
23:2898186..2915831
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AA seq
436 aa
AA seq
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MSDKEDGASGGGLNVTLTFRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSSPER
IVTITGPTEGIFRAFSMIAEKFEEDITAAMTNSTVTSHPPVTLRLVFPGSQCGSLIGKGG
SKIKEIRETTGAQVQVAGDMLPESTERAVTISGTPQAITQCVRHICSVMLESPPKGATIP
YRPKTMPGAGHPVFQQQQQLASQAFTIQGQYAFPHQDLTKLHQLAMQHIPLPSLGQSNPT
FPGMGASVPTSSQELAIPNELIGSIIGRHGSKVNEIRQVSGAHIKIASATDGSPMRQVTI
IGSPTSINVAHYLINASLEMAKYTMHAASSASPVDLNNMSFSQSVPTVSTPTSMAVMAAT
TQVPDTMNMHSPSTLQSIPTQHYAVPVSSLLGMKTLPMLAMHPAAASGLPQGLSPYSTKV
PTAGMKKSDRQKFAPY
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaaggaagatggggcctcagggggggggctgaatgttaccctcacgtttcgg
cttctcatgcatgggaaggaagtgggcagcataattggaaagaaaggggaaaccgtcaaa
aagatgagagaggagagtggcgctcgcatcaacatttcagagggatcttctccagagagg
attgttaccatcacaggaccaacagagggcatcttcagagctttctctatgatcgctgag
aagtttgaggaggacattacagctgcaatgacaaacagcactgtaacaagccatcctcca
gtgacactccgccttgtgttcccaggcagtcaatgtggctccttgataggcaaaggaggc
tccaagatcaaggagatccgagagaccacaggtgctcaggtgcaggtggcaggggacatg
ctgccggaatccactgagagagctgtcactatctcaggcactcctcaggccatcacgcag
tgtgtcagacacatctgctctgtcatgctggagtcaccgcccaaaggagcaacaatccca
tatcgccccaagaccatgcctggagctggccatccagtatttcaacaacaacaacaactt
gcctcacaagccttcacaattcaaggacagtatgcttttccacatcaagatttgaccaag
cttcaccagttggctatgcagcatatccccctcccttcccttgggcagagcaaccctacc
ttccctggaatgggtgcctctgtccccaccagttctcaggagctggcaatacccaatgaa
cttattggctccataattggcagacacggaagcaaggtcaatgagattcgccaggtgtca
ggagctcacattaagatagccagtgccacggacggatcgcccatgcgccaagtcacgatc
ataggctctccgaccagcatcaatgtggcacactacctcatcaatgccagcttagagatg
gctaaatacaccatgcatgctgcttcctctgcatcacctgttgacctcaacaacatgagc
ttctctcagtctgttcccactgtctccacaccaacctctatggctgtcatggctgccact
acccaagtccctgacaccatgaacatgcactccccctccaccttacagtctatccccacc
cagcactatgctgtccccgtttccagtctacttggcatgaaaacgctccctatgctggct
atgcacccagcagctgcctcaggccttccacaaggtctctccccttacagcactaaagta
cctactgctggcatgaaaaaatctgaccgccagaaatttgccccatattga
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