Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139381858
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Entry
139381858 CDS
T10872
Name
(RefSeq) thyrotropin-releasing hormone receptor-like
KO
K04282
thyrotropin-releasing hormone receptor
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04020
Calcium signaling pathway
ocla04080
Neuroactive ligand-receptor interaction
ocla04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
139381858
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
139381858
04081 Hormone signaling
139381858
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ocla04030
]
139381858
G protein-coupled receptors [BR:
ocla04030
]
Rhodopsin family
Peptide
Thyrotropin-releasing hormone (TRH)
139381858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7tm_4
DUF6470
7TM_GPCR_Srx
7TM_GPCR_Srv
DUF4573
Motif
Other DBs
NCBI-GeneID:
139381858
NCBI-ProteinID:
XP_070981789
LinkDB
All DBs
Position
2:complement(59973084..60000340)
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AA seq
512 aa
AA seq
DB search
MTENVSSRMDTPTNISLVGPGDPISQSLEYKTVAVFLVLLVCGLGIVGNIMVVLVVLTTR
HMRTPTNCYLVSLAIADLTVLVAAGLPNVSDSLMGTWVFGHAGCLGITYLQYLGINVSSC
SITAFTVERYIAICHPMRAQTVCTLSRAKRIIAGVWVFTCVYCMLWFFLVDIQVMKDSTI
QCGYKVSRDLYLPIYLIDFAIFYVIPLLLAIVLYGLIARVLYLNQLPNRPDAGTVSAGAT
TLRRSCKEPADEGKGGRQGRPKSVLFSRKQVTKMLSVVVILFALLWMPYRTLVLINSFVD
TPYLDAWFVLFCRICMYANSAINPVVYNLMSQKFRSAFRGLSQCQRLEAHCTLSMNQTGY
SMARDPRTSQQTSNETKQGARRVTCTDTVTEWQSKDTSSAQERKDLHHLKEERKDTSFGE
INSTPGQSEINSTPGQFEINSIPGQSEINSTPGQSEINSTPGQSEINSTPGQSEINSTPG
QSEINSTSGQTQIKATPGQHEMSEAGINHTVL
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaaatgtaagctcaaggatggacaccccaaccaacatttccttggtgggccca
ggggaccccatatctcagtctctggagtacaagactgtggcagtgttcctggttctgctg
gtctgtggacttggcattgtgggtaatatcatggtggttctggtggtcctcaccacgcga
cacatgcgtacgcccaccaactgctacctggtcagcctggccatagcggacctgaccgtg
ctggtggccgctggtctgcctaatgtgtcagacagcctgatgggcacctgggtgtttggg
catgctggctgccttggtatcacctaccttcagtatcttggcatcaatgtgtcctcctgc
tccattacagccttcactgtggagaggtacattgctatctgccacccaatgagggcccag
acagtgtgtacgttgtcccgggccaagcggatcatagcaggggtgtgggttttcacctgt
gtctactgcatgctgtggttcttcctggtggacatccaggtaatgaaggacagcaccatc
cagtgtggctacaaggtgtcccgtgacctctacctccccatttacctcattgactttgcc
atcttctacgtgatccctctgctcctggccatagtcctgtacggcctcattgcccgcgtc
ctgtacctcaaccaactccccaaccggcccgacgcgggtacagtctctgctggcgccacc
acgctccgcaggagctgcaaggaaccagcagacgaaggaaaagggggtcgtcagggccgc
ccaaagagtgtgctcttctccaggaaacaggtcaccaagatgctgtcagtggtggtgatc
ctgttcgccttactgtggatgccctaccggaccttggtccttattaactccttcgttgac
acaccttacctggatgcctggtttgtactgttctgtcggatttgtatgtatgccaacagt
gccatcaacccagtagtgtacaacctgatgtctcagaagttccgttcagcattccgcggg
ctctcccagtgccagaggctggaggcccactgtacactctccatgaaccagaccggctac
agcatggccagggacccacgcacctcccaacagactagcaacgagaccaaacagggggca
aggagagtgacctgcactgacacagtgacagagtggcagagcaaagacacctcctcagcc
caagagaggaaggatctgcatcacctgaaggaagagaggaaagacacaagctttggtgag
atcaactccacacctgggcaatctgagatcaactccacacctgggcaatttgagatcaac
tccatacctgggcaatctgagatcaactccacacctgggcaatctgagatcaactccaca
cctgggcaatctgagatcaactccacacctgggcaatctgagatcaactccacacctggg
caatctgagatcaactccacatctgggcaaactcagatcaaagccacacctgggcaacat
gagatgagtgaggcaggaattaatcacacagttctgtag
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