Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139381962
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Entry
139381962 CDS
T10872
Name
(RefSeq) thrombospondin-2-like isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04145
Phagosome
ocla04510
Focal adhesion
ocla04512
ECM-receptor interaction
ocla04820
Cytoskeleton in muscle cells
Brite
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Phagocytosis
Opsonins
139381962
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
139381962
Exosomal proteins of colorectal cancer cells
139381962
Exosomal proteins of bladder cancer cells
139381962
Glycosaminoglycan binding proteins [BR:
ocla00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
139381962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139381962
NCBI-ProteinID:
XP_070981947
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Position
23:49965910..50196770
Genome browser
AA seq
1190 aa
AA seq
DB search
MILRSLNLLPILLLCSSALPQDGEVTSDDDTTFDLFDISGITRKTLGAKQFRGQDTDNPA
YRFIRFDHLPSVSAPVLKQMLQQIQNNEGFVFVASMRQDRGSRGTLIAMEGANGQRQFEI
VSNGRANTLDLVYWVDGSQNVVSFEDVDLSDSQWKNITLHVHGENANLFVGCSLIDSFIL
DEPFYEYLQAEGSRMFVAKGSIRENHFRGLLQNVRFMFDTSVDDVLRNKGCEVTKPDEAN
TVVSESTDMVDVSSSTAITTNFIGQKTENLGADMCERSCEELSIMFQELKGLRVVVGNLI
DGLQKVTEENTVMKDTLGKIKNSKEKHMCWQDGRMFEDKEDWVVDSCTTCTCQDSKIVCH
QITCPPVACVGPSFIDGECCPVCLPKDSEDGWSPWSEWTECTVTCGTGTQQRGRSCDATS
NPCSGPSIQTRKCSLGKCDSRVRQDGRWSLWSPWSSCSVTCGEGQITRIRHCNAPTPQLG
GKDCEGQGRETQRCEAKPCPIDGGWGPWSPWAICSATCGGGVKGRTRVCNSPEPQYKGKK
CPGETNDSNACNKQDCPIDGCLSNPCFGGVHCNSGSDGSWECGPCPLGFRGNGTHCEDVN
ECDIVSDVCFKAGGALRCVNTDPGFHCLACPPRYKGTQPFGVGVEAASKNKQVCEPENPC
KDKTHNCHRSAECIYLSHFSDPMYKCDCRIGYAGDGFICGEDSDLDGWPNQNLVCGANAT
YHCRKDNCPNLPNSGQEDFDKDGQGDACDKDDDNDAIVDERDNCPLLYNPRQFDFDKDDV
GDRCDNCPYEHNPAQIDTDHNGEGDACAVDIDGDEIPNEQDNCPYVYNNDQKDTDMDRVG
DQCDNCPLLHNPDQADTDNDLVGDQCDNNQDIDEDGHQNNLDNCPYVANSNQADHDKDGK
GDACDFDDDNDGIPDDRDNCRLTPNKDQLDSDGDGRGDACKDDFDNDNIPDILDVCPENN
AVTVTNFRKFQMVHLDPKGTTQIDPNWVVRHQGKELVQTVNSDPGIAVGFDEFNAVDFSG
TFYVNTDRDDDYAGFVFGYQSSGRFYVVMWKQVTQTYWEDKPSKAFGISGVSLKVVNSTT
GTGENLRNALWHTGNTKDQVRTLWHDPKNIGWKDYTAYRWHLIHRPKTGFIRVVVYEGKQ
ILADSGPVYDKTFAGGRLGLFVFSQELVFFSDLKYECRDELEFPTVLSIR
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgatactcagaagtctcaacttgctgccgattttattactttgctcctcagcgctacct
caagatggcgaggtcacatcggatgacgacacaacgtttgacctgtttgatattagcggt
atcacacgcaagactctgggcgccaagcaattccgcggccaagacacggacaaccctgct
taccgcttcatccgcttcgaccatttgccctcagtgagcgcgcccgtgctcaaacagatg
cttcagcaaatccagaacaatgagggcttcgtgttcgtggccagcatgcgccaggaccgc
ggatcgcggggaaccctcatcgccatggaaggcgccaacggccagcggcagtttgaaata
gtctccaacggccgcgccaacacgctggaccttgtctactgggtggacggctcccaaaat
gttgtctccttcgaggatgttgacctgtccgactcgcagtggaagaatatcacacttcat
gttcatggcgaaaacgcaaatctgtttgtgggctgcagtctcatcgacagcttcatcttg
gatgagccgttctacgagtacctgcaggcggaggggagccgaatgttcgtcgctaaggga
tccatccgtgaaaaccacttcagggggttactgcagaacgttcgcttcatgttcgacaca
tccgtggatgacgttcttaggaacaagggctgtgaagtcactaagccagacgaggccaac
acggtggtgagtgagagcacagacatggtggatgtgagttcctccactgccatcaccact
aacttcattggccagaaaacagagaatctaggagcagatatgtgtgaacgatcctgtgag
gaactcagcatcatgtttcaggagctcaaaggactgcgggttgtagtggggaacctcatt
gacggcctacagaaagtgaccgaggagaacacagtgatgaaggacactctgggaaagata
aagaactccaaggagaaacacatgtgctggcaggatggacggatgtttgaagataaggag
gactgggtggtggacagctgcaccacgtgtacctgccaggactcaaagattgtgtgtcac
caaatcacctgtcctcctgtggcctgtgttggcccctccttcatcgacggagagtgttgc
cctgtgtgtctgcccaaggacagtgaggacggctggtccccctggtcagagtggacagag
tgtactgtcacctgtgggacaggtactcaacagagaggacgctcatgtgatgccaccagt
aacccctgctctggaccatccatccagaccaggaaatgcagcctgggaaaatgtgacagc
cgagttcgtcaggatggtaggtggagcctgtggtctccatggtcatcatgttccgtgacg
tgtggcgagggtcagatcaccaggatacgccactgcaacgcccccacaccacaactgggg
ggcaaagactgtgagggccaggggagagagacacagcgctgtgaggccaagccctgtccc
attgacggtggttggggaccttggtcgccatgggcgatctgctcggcaacctgtgggggt
ggagttaagggtcggacccgtgtctgtaacagccccgaaccccagtacaaaggcaagaag
tgccccggggagaccaatgacagtaacgcctgcaacaaacaggactgccctatcgacggc
tgtctgtctaacccatgctttgggggagtgcactgtaacagcggctctgacggatcctgg
gagtgtggaccctgcccccttggtttccgtggcaacggcacccactgtgaagatgtcaac
gagtgtgacattgtgtcagatgtctgctttaaagcaggtggagcattgcgttgcgtcaac
acagacccagggttccactgtctggcctgcccaccccgctacaagggaacacagcccttc
ggtgtgggggtggaggctgccagcaagaacaaacaggtttgcgagccagagaacccctgc
aaagacaagacccacaactgtcaccgttcagctgagtgtatctaccttagccacttcagt
gaccccatgtataagtgtgattgtaggataggctatgccggggatggcttcatctgtgga
gaggactctgacctagacggatggcccaatcagaacctggtgtgtggcgccaacgccacc
tatcactgcaggaaggataactgccccaacctgcctaactctggacaagaggactttgac
aaagacggccagggagatgcttgcgacaaggatgatgacaatgatgcaatcgtggatgag
agagacaactgtcctctcctgtataaccccagacagtttgactttgataaagatgatgtg
ggtgaccgttgtgataactgcccctatgaacacaaccctgcccagattgacactgaccac
aacggcgaaggagatgcctgtgctgtcgacattgatggagatgaaatcccaaatgagcaa
gacaactgtccgtacgtgtacaacaatgaccaaaaggacactgacatggatagagtgggt
gaccagtgtgacaactgtcctctattacacaaccctgaccaggctgacacagacaatgac
cttgtaggagaccagtgtgacaacaaccaggacattgatgaagacggtcaccagaacaac
ctggacaactgtccttatgtggccaactcaaaccaggcagaccacgataaggacggtaaa
ggggacgcctgtgactttgatgatgacaatgacggtatccctgacgatagagacaactgt
agattgacgcccaacaaagatcaactggactctgatggcgatggtagaggagacgcctgc
aaagacgactttgacaacgacaacatcccggacatccttgacgtgtgtcctgagaacaac
gccgtcaccgtcacaaacttccggaagtttcagatggtgcacctggaccccaagggaacc
acgcaaatcgaccccaattgggtggttaggcatcagggcaaggagctggtgcagaccgtc
aactctgacccaggcatcgctgttggctttgatgagttcaacgcggtggacttcagtggt
acgttctatgtgaatacggaccgggatgacgactacgctggtttcgtgttcggctaccag
tcgagcggccgcttctacgtggtgatgtggaagcaggtcactcagacctactgggaagac
aaaccctccaaggccttcggtatctctggtgtctccctgaaggtggtcaattcaaccaca
ggcacaggggagaacctgagaaatgccctgtggcacacaggaaacactaaagatcaggtg
cgcactctttggcacgatcccaaaaacattggctggaaggattacacagcctacaggtgg
cacctcatccacagacccaaaactggtttcatcagggttgtggtgtatgaagggaaacag
atcttggcagactcaggaccagtgtacgacaagacgtttgctggaggacggttaggcctg
tttgtcttctcccaggaactggtcttcttctccgatctcaaatacgagtgcagagatgag
ctggagtttccaactgtgttgtccatcagataa
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