Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139382036
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Entry
139382036 CDS
T10872
Name
(RefSeq) girdin-like isoform X1
KO
K25392
girdin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocla03037
]
139382036
Cilium and associated proteins [BR:
ocla03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
139382036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HOOK_N
GAS
DUF4472
KASH_CCD
Motif
Other DBs
NCBI-GeneID:
139382036
NCBI-ProteinID:
XP_070982073
LinkDB
All DBs
Position
23:20043892..20126920
Genome browser
AA seq
2033 aa
AA seq
DB search
MESEVFTPLLEQFLLTPLVAWVKAAGHSSGNDGTKLSEYIELLDGIYLNEIMLEINPKAI
VQRTNKKVNNDSTLRIQNLSILIRQIKSYYQETLQQLVAMPLPNVLVLGRNPLSEQGLEE
MRKLLLLLLGCAVQCEKKEEYIERIQTLDFDTKAAIASHIQEVTHNQENVVDLQWLEGGD
LPPEDLDSFSRNMAFHLKRLVDERDDQLETIVELTQERDCGLYSPPPLFAQSPNDSPSLR
RTESRQHLSVELADAKAKIRRLRQELEEKSEQLLDCRQELDNMETENKRIQQESLQLLSD
ARSARAYRDELDVLREKAIRVDKLESEVGRYKERLHDIEFYKARVEELKEDNQVLLETKA
MLEDQLEGTRARSDKLHELEKESLQLKSKIHDMEMERDMDRKRIEELLEENLVLEMAQKQ
SMDESLHLGWELEQLSKTPDLTEVPQKSLGHEVNELTSSRLLKLEKENQALLKTVEELRG
SASKDAPAHRLKADKEDQRLTQRLGQLESELNTGRESLCSAESLSTDLMKEKALLEKTLE
TLRENADRQVKGLEQENEHLTQTVSSLRQRSQVGAEARVKDVEKENRVLHESIRETSSKL
NKLEFERKQLRKDLEMYKEKGERAEELEVEAQRLERENEALQKRVASLGITCDKVVSLEK
ENSELEVEGRRLKKVVDGLRSTSFQLEALEKENSQLDEENLELRRTAEVLRSAGNKAAQL
ELENLELESERSQLKRSLELLKASSKKTERLEVSNQGLDTENQRLQKALDNSSRKMQQLE
GELQDVEQENQSLQRSLEELKISSKRLEQLEQENKTLEQESSQLEKDKKHLEKDNKRLRQ
QAEIRDSKMDEDNLRISHLEKDNRSLGKEMTSFKDSCNRLKDLEKENKELVKQATIDKKT
LVTLREELVSEKLRTQQMNNDLEKLTHELEKIGLNKERLLQDKQSSDNDRYKLLEFKLES
TLKSTLEIKEEKIAALEARLQESSNLNQQLRQELKTVKKNYEALRQREEEERMVQSSPPR
RGDREDSQAVNKWEKESHETTRELLKVKDRLIEVERNNATLQAEKQALHTNLKQLETQSS
NLQAQILALQRQTASLQENNTTLQTQNAKLQVENSTLNSQSGTLMAQNAQLATQQSSTEN
EKEGAMREREDLRSTYEMLLRDHEKLAALHERQASEYEGLISKHGGLKSAHKSLESQHRD
LEDRYNQLLRQKDQLEELEKQLKAEQEKMLSENKSHEATAIDYYKLKEENERLNMAHRQL
VKDNEGLQVDHKNLKSQMNGAKLEQTRLEAEFSKLKEQYQQLDITSTKLTNQCDLLSQLK
GNLEEENRHLLDQIQTLMLQNRTLLEQTMESKDLFHVEQRQYIDKLNELRRQKEKLEEKI
MDQYKFYDPSPPRRRENWITLKMKKLIKPRSRERMRSLTLTPTRSESSEGFLGLPLDSQD
SSSIGSGSNSLDDTLTQKRNSRKKDSQRVQHSHVQSNQGNQGSSNAVKWLPFMRNRSKEK
DKAKDIYRRSMSMNDLLQTIALAGGQWAGSTENLEGPVEANGGSRSRHMKELGSMAYSTN
AINYTTLTLPSGNRAKRSLKIKDNASCEDVAASSDDPIGFRGQASRASSLHSIKTISSNT
SHSTPLEAKGTLNGNLSRPHSESSGEFSLSLDQEEWSSGSSPVQQPLSHSSHQSSMLLQR
SLDPQATQAKKKNGSASEVLSLQQFLEEHIDPAESQSDSLGCQSPRLSGGAEHVQRDRAK
RGSTGTKGRGILRSASGKAAPVNSDGRPSRGGQPGHPSLRKAESTRVKGMVLPRVSLSSQ
SKAVSVSERLDISSSMLPRASSVISTAEGSTRRTSIHDLLSKDTRQPVSVDPSPSSKALP
RAYTTPSEYPPTNNPTQSQHPTHQSIPLAPAPMPLSLLKSVSMPCTGSQHPLSCKETDLS
SLESFFDSSFTVESVFMDSIFSEPDFTGCSSKSHTFLSLNTSLVSNISGPPGKTHLRPNP
AQTAQNQPNGLKPSPPDQSGEHVIDTNNVLDADPSPPLSPEDQQSLWYEYGCV
NT seq
6102 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtgaggtttttacgccattgttggaacaatttctgctcacgccattggtcgcc
tgggttaaggcggctgggcattcatcaggaaacgatggcaccaaactatcggaatacatt
gaattgttggatgggatttatttaaacgagatcatgcttgagataaatccaaaagccatt
gttcaaagaaccaacaagaaagtgaacaatgactcaacactgcgcatacaaaacctctcc
atcctgatccggcagataaagtcgtactaccaggagaccctccagcagctggtggcgatg
cctctccccaacgtgctggtgctgggcaggaaccctctcagtgagcaaggtctggaggag
atgaggaagctgttgttgctgttgcttggctgtgctgtccagtgtgagaagaaagaagag
tacatcgagaggatccagaccctagactttgacacaaaagctgccatagcatctcacatc
caagaggtgacccacaaccaggagaatgttgtggacctacagtggctggaggggggtgac
ctgcccccagaggacctggactccttctccaggaacatggccttccatctcaaacgcctg
gtggacgagagagacgaccagctggagaccattgtggagctgacccaggagagggactgt
ggactgtactctcctccgcccctctttgcccagtcgcccaacgactcgcctagcttgcgc
cgtacagagagccgccagcacctgtctgtggagctggccgacgccaaggccaagatcaga
cgcctgcgccaggagctggaggagaaaagtgagcagctgctggactgtagacaggagctg
gacaatatggagactgagaacaagaggatacagcaagagagcttgcagttgttgtcagat
gcgcgttctgccagggcctatcgtgacgagctggacgttctgagagagaaggccatcaga
gtggacaagctggaaagtgaagtgggacgctacaaggagaggctccatgacattgagttc
tacaaagctagagtggaggagctgaaggaggacaaccaggttctgctggagaccaaggcc
atgcttgaggaccagctagaaggaaccagggctcgctctgacaaactccacgaactggag
aaagagagcctgcagctcaaatccaagatccatgacatggaaatggagcgggacatggac
aggaagcgtattgaggagctgctagaggagaacctggtgctagaaatggcccagaaacag
agcatggacgagtctctccacctgggctgggagctggagcagctctccaagacccctgat
ctgacagaggtgcctcagaagtctctgggccacgaggtgaatgagctgacgtccagccgc
ctgctgaagctggagaaggagaaccaggccctgctgaaaaccgtggaggagctgaggggc
tctgccagcaaggacgcccctgcacaccgcctcaaggccgacaaggaggaccagaggctc
acccagaggctggggcagctggagagtgagctgaacacaggcagggagagtctgtgcagt
gcagagagcctcagcaccgacctgatgaaggagaaggctctgttggagaaaaccctggag
acactgagagagaacgcagatagacaggtgaaaggcctggagcaggagaacgagcatctg
acccagactgtctcgtcgctgaggcagcgctcccaggtgggtgctgaggcgcgggtcaaa
gacgtggagaaggagaaccgcgtgctgcacgagtccatccgggagaccagctccaagctc
aacaagctggagtttgagcgcaaacagctacgtaaggaccttgagatgtacaaggagaaa
ggcgagagggctgaggagctggaggtggaggcgcagcggctggagagggagaacgaggcc
ctgcagaaacgagtagccagtctgggcatcacctgtgacaaggtggtgtctctggagaag
gagaactccgagctggaggtagaaggccgacgtttaaagaaggtggtggatggcctgcgg
agcacatccttccagttagaggccctggagaaggagaactcccagctggacgaggagaac
ctggagcttcgcaggactgctgaggtgctccgctcggcagggaacaaggcggctcagctg
gagctggagaaccttgagctggagagtgagaggagccagctgaaaaggagcctggagctg
ctcaaggcctcctccaagaaaactgagaggctcgaggtgagcaaccagggcctggatacg
gaaaaccagcggctgcagaaggccctggacaacagcagccgcaagatgcagcagttggag
ggggagctgcaggatgtagagcaggagaaccagagcctgcagaggagcctggaggaactg
aagatctctagcaaacgtctggagcagctggagcaggagaataagactctggagcaggag
agctctcagctggagaaggacaagaagcacctggagaaggacaacaagaggctgagacag
caggcggagatcagggactccaagatggacgaggacaacctgaggatcagccacctggag
aaggacaaccgttcgctgggcaaggagatgacctccttcaaggactcctgcaaccgcctc
aaagatctggagaaggagaacaaggagctggtcaaacaggccaccatcgataagaagaca
ctagtcactctacgagaggaactggtgagtgagaaactgcggactcagcagatgaacaat
gacctggagaaactgacccacgagctggagaagataggcctcaacaaggagaggctgctg
caggacaagcagagctctgacaacgacaggtacaagctgctggagttcaagctagagtcc
actctcaaatctactctggagatcaaggaggagaagatagcagccttggaggccagactg
caggagtcctccaacctcaaccaacaactgcgccaggagctcaaaactgtaaagaagaac
tatgaggccctgcgacagagggaggaggaggagaggatggtgcagagctcaccccccaga
agaggggacagggaggactctcaggcggtcaacaagtgggagaaggagagccacgagacc
acccgggaactgctcaaggtcaaagaccgcctcatcgaggtggagagaaacaatgccacc
ctacaagcagagaagcaggccctgcataccaacctgaagcagctggagacccagagcagt
aacctgcaggctcagattctggctctacagagacagactgcatctctacaggagaacaat
accaccctacagacccagaatgccaaactacaagtggagaactccaccctgaactcccag
agcggcactctcatggcccagaatgcccagcttgcgacacagcagtctagcacggagaac
gagaaggagggggcgatgagagagagggaggacctgaggtcgacctatgagatgctactg
agggaccatgagaagttggctgccctgcatgagaggcaggcctcagagtatgagggcctc
attagcaaacatggaggcctgaaaagtgcccacaagagcctggaatcacagcacagagac
ctggaggacaggtataatcagctgctgaggcagaaggatcagctggaggagctggagaaa
cagctgaaggcagagcaggagaagatgctgtctgagaacaagagccacgaggccacggct
atagactactacaaactgaaagaggagaatgaaaggctgaacatggcacaccgccagctg
gtgaaggataatgagggcctgcaggttgaccataagaacctgaagagccagatgaacggt
gccaagctggaacagacccgcctggaggcagagttctccaaactcaaagagcagtaccag
cagctggacatcacctccaccaagctcaccaaccagtgtgatttgctgagtcagttgaag
gggaacctggaggaggagaaccgtcacctgctggaccagatccagaccctgatgctgcag
aaccgcaccctgctagaacagaccatggagagcaaggacctgttccacgtagaacagaga
cagtacattgacaagctgaacgagttgaggagacagaaggagaagcttgaagagaagatc
atggaccagtacaagttttatgacccctctcctccacggagacgagagaattggatcacc
ctgaagatgaagaagctgatcaagccgaggagtcgggagcggatgcgttccctgacactg
actcccacgcgctccgagtccagcgagggcttcctggggcttcctctggacagccaggac
tcttcctccataggctctggctccaactccctggacgacacactgacacaaaagaggaac
agcaggaagaaagactctcagagagtgcagcactcccatgtgcagagtaaccagggtaac
caaggttcctctaatgctgtgaaatggttgccctttatgaggaacagatcgaaggagaaa
gacaaagcgaaggacatctaccgccggtccatgtccatgaatgacctgctgcagaccatt
gccctggcagggggccagtgggcgggcagcacagagaacctggaggggcccgtggaggcc
aacgggggcagccgaagtcggcacatgaaggagctgggctccatggcctactccactaac
gctatcaactacaccaccctcactttgccctctggcaacagggccaagaggagcttgaag
atcaaagacaacgcttcctgtgaagacgtagcagcatcctcagacgaccccattgggttc
agaggtcaagcctcacgagcctccagcctccatagtatcaagaccatcagcagtaatacc
tcccactccactccgctcgaggccaaaggcacgttgaacggaaacctcagcaggccccac
agtgagagcagtggggagttcagcctcagtctggatcaggaggagtggtccagcgggagc
agccctgtccagcagcccctgtcccactcctctcaccagagctccatgctgctgcagagg
tccctggacccccaggccacacaggccaagaagaaaaatggcagcgccagcgaggtgctc
tctctacagcagttcctagaggagcacatcgaccctgcagagtctcagtcagattctctt
ggctgccagtctccccgcctttccggaggcgctgagcatgtgcagagagaccgggccaag
cgaggctccaccggcactaaggggcggggcatcctgcgctcagccagtgggaaggcagcg
ccagtgaactccgatggccgcccctccaggggtggccaaccaggtcatcccagcttacga
aaggcagagagtacgcgtgtgaagggcatggtcctgccacgggtcagcctctcctcccag
agtaaagccgtgtctgtgtctgagcgtctggacatctcctcctccatgctgccccgggcc
agcagcgtcatatccacagccgagggctccacacgtcggaccagcatccatgacctgctg
tccaaagacacccggcagcccgtgtctgtggacccctcaccctcctcaaaggccttgcct
cgcgcctacaccacgcccagtgagtaccccccaaccaacaaccccacccagtcccaacat
cccacccaccagtccatccccctagccccagcccccatgcccctgtccctgctgaagtca
gtcagtatgccctgcacaggcagtcagcaccccctcagttgtaaggaaactgacctctcc
agcctcgagtctttctttgactcgtccttcacagtggagtcagtgtttatggactccatc
ttcagcgagccagacttcacagggtgcagtagcaagagccacaccttcctttccctcaac
acctccctggtcagtaacatcagcggccccccaggcaaaacccacctccggcccaaccct
gcccaaaccgcccagaaccaaccaaatgggctaaagcccagcccacctgaccagagtggg
gaacatgtcattgacaccaataatgtgcttgatgctgacccatctccaccccttagccca
gaggaccaacaatcgttgtggtatgagtatggctgtgtctga
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