KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139382037
Entry
139382037         CDS       T10872                                 
Name
(RefSeq) ubiquitin-ribosomal protein eS31 fusion protein-like
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03010  Ribosome
ocla04120  Ubiquitin mediated proteolysis
ocla04137  Mitophagy - animal
ocla04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    139382037
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    139382037
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    139382037
   04137 Mitophagy - animal
    139382037
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:ocla03011]
    139382037
   04121 Ubiquitin system [BR:ocla04121]
    139382037
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ocla04147]
    139382037
Ribosome [BR:ocla03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    139382037
  Archaea
    139382037
Ubiquitin system [BR:ocla04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   139382037
Exosome [BR:ocla04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   139382037
  Exosomal proteins of colorectal cancer cells
   139382037
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 DUF2604 Dsc3_N IBR TBK1_ULD Ubiquitin_5 OTU1_UBXL
Other DBs
NCBI-GeneID: 139382037
NCBI-ProteinID: XP_070982076
LinkDB
Position
23:complement(20134163..20141469)
AA seq 156 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKIHRLRRE
CPAEECGAGVFMASHFDRHYCGKCCLTYCFNKPEDK
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagattttcgtcaaaaccctcacggggaagactataaccctcgaggttgagccttca
gacaccattgaaaatgtcaaggccaaaatccaagacaaagaaggtatccctcccgatcag
cagaggttgatctttgctggtaagcagctggaggatggacgcacactgtccgactacaac
attcagaaggagtccactctgcatttggtgctgagactccgtgggggtgccaaaaagagg
aagaagaagtcctacaccactcccaaaaagaacaagcacaagaggaagaaggtcaagctc
gcagtgctcaagtactacaaggttgatgaaaatggcaagatccaccgtctgcgtcgtgag
tgtccagctgaagagtgtggtgctggtgtgttcatggccagccacttcgataggcactat
tgtggcaagtgttgcctcacttactgcttcaacaagccagaggacaagtaa

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