Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139382265
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Entry
139382265 CDS
T10872
Name
(RefSeq) latent-transforming growth factor beta-binding protein 4-like
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
139382265
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
139382265
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
EGF_3
FXa_inhibition
hEGF
Plasmod_Pvs28
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
139382265
NCBI-ProteinID:
XP_070982233
LinkDB
All DBs
Position
24:7685753..7751850
Genome browser
AA seq
1930 aa
AA seq
DB search
MTTILMKHIETERKKLQSASQSDLQDTQTTSVKSFHTQKGQYTVHASPPAASNQTAGHRG
GTAAGAGRRGAERIKVLFTPTICKVRCTQGRCTNFCEQGNVTTLYNSEQGGRAALGPGFR
VFLCPMLCQNGGVCIQKDRCLCPPTFTGKFCHIPVATPSTNDIEKPPRIPSVLASQQLLT
QSEYILPLQSQQQSHSQPSGASGSSMVKVRVQHPPEASVKIHQVLKVGYGPGTVREQSET
VTWSAGLSGARTSVLPGERAEAPPPKPRVQAQTLHGDSTYTESSGFKYCFREVRNGQCSS
PLPGLRSQDTCCRGIGLAWGINECVLCPPNTGNGVDGSCPAGFERINGTQCVDVNECLQP
GFCENGNCVNTRGSYSCVCRQGYILDASHGICISRKVISEDKGQCYRILNSGSGRGSCSV
PILRNITKQICCCSRVGKAWGKNCERCPYFGSVAFKEICPAGPGYHYSASAIKFNQRVVE
QHGTGGPPVISQSTPQTRPQQPASSGAQTPQTSPQQPSSSGFFTPQTRPQQPDGRALIPQ
TRPQQPSSGGSLSPQGRPHIPAISVTAGPTRVVTARTPTQTKRPPVDQRPISPVRPAQPL
LSPVTPRPPIPRPVRGVCETMPQVCGQGRCVDQPGGRHTCICNEGYQHNAQQTHCQDIDE
CRASPPPCGSGRCQNTEGGYRCSCPSGYQPGPRGTSCIDVNECIQALSPCSVGECENTPG
RYRCVCPAGFRANFQQTQCQDIDECRQVPNPCNNGRCENSPGSFKCVCRTGYKLEGNTCK
DVDECEDPLKCPGQACVNSPGSYKCVSCPPGFGLLNEQCRDVDECRQTPSLCTNGRCENT
PGSYRCVCHTGYKLQGKACTDVDECEDPLRCPGQACVNSQGSYNCVSCKPGFSMINGQCS
DIDECRQSPGPCTNGHCENTQGSYSCACLTGYRLHGDTCTDSDECADPSQCPGQECVNSQ
GSYKCVSCKPGFGLVDRRCTDVDECLHSPSRCANGRCENTAGSYKCACRSGFRLQGNTCT
DVNECENALQCPGQECINSEGSFICVACSPGFVAGNGQCTDIDECRQTSNLCANGLCENT
LGSYRCVCRTGFKLQGSVCIDVDECADPPQCPGQRCVNSEGSYKCIACKAGHRMQDGLCA
DVDECQSPDTCGAARLCVNTDGSYRCDCQPGYRTTGLGRQCRDVNECLEGEYCFPKGECV
NTEGSYRCVCSQGYTTSSDGSSCLDVDECARSGPGVCQDGRCVNTEGSYQCQCQVGFTTN
PEKTACLDVDECSEGAVCRTQRCENTIGSYRCITSCEPGYRVTRTGECVDINECANETVC
GEHAFCQNLIGTYQCMCDQGYTATSDGKGCVDENECETMQGVCGAARCENVDGSFMCECP
GEGEEFDTRSGQCLSTPRPGLPVFSGGSSSSSSTTGLGPQRRPDASQLPPARPGELRECY
YNTEEQRSCSVLARNTTQQECCCTVGQGWGMGCQFDPCPQLGTAEHQALCPSGRGYVTGP
GAFSYKDVDECKLFHPEVCKSGVCVNNIPGYSCYCTSGYYYDNVFLECIDVDECEAGEDS
CPGGICVNTLGSHFCTCVPPLVLDDTQRSCVNSTGLAVDEKLSFCWQYVTPDLVCQSPLL
GGQVTFTECCCLYGEGWGLQCALCPARDSEDYEARCNVFLRPPEFPPPFPDRYGPDPGPG
RGGGGGYRVPYGQDSFPDPIPRRPEYPRPDYDDYTPPGGSRSGFRGRTPSTFRVPEIPYR
QPSGYIPERYYGEDDYGPPDAPPRPPFRTLPDPRSELSFGARPPLPIPEGLPLSLAPLPD
SDPYSEEEEEGPEPWRVGPPFPDRRGPGGGPRRVYERQYEPYAGLSTEDCGILHGCENGR
CIRVAEGYTCDCYEGYELDMTSMACIDINECEDPDNVCASGRCINTDGSYRCVCHRGYVM
SRRPNHCVAA
NT seq
5793 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccatcctgatgaaacacatcgagacagagaggaagaagctccaatcagcctca
cagtcagacctacaggacacccagaccacaagtgtcaagagcttccacacccagaagggc
cagtacactgtccacgcgagcccacctgcagccagcaaccagaccgccggccaccgagga
ggaacggcagcaggggcaggaaggagaggagctgagcgcatcaaagtgctcttcaccccg
accatctgcaaggtgcgctgcacccagggacgctgcaccaacttctgcgagcagggcaat
gtgaccaccctctacaacagtgaacaggggggccgggctgcgctgggaccgggcttcaga
gtcttcctgtgccccatgttgtgtcaaaacggaggggtctgcatccagaaggatcgctgc
ctctgcccgccaaccttcaccggcaagttctgccacatccccgtggccactccctccacc
aatgacattgagaagcctccgcgcatcccctcagtgctggccagtcagcagctgctgacg
cagtcggaatacattctccctctgcagagccagcagcagagccacagtcagcccagcggt
gcttctggctcatccatggtcaaggtgcgggtgcagcaccccccagaggccagcgtgaag
atccaccaggtgctgaaggtggggtatgggccaggcacagttagggagcagtcggagacg
gtcacctggtcagcaggcctctcgggggccaggaccagtgttctgccaggggagcgggcc
gaagccccaccacccaaacccagagtccaggcccagaccctccacggtgactccacctac
acagaatcctccggattcaagtactgcttcagggaggtccgcaacggccagtgcagctca
cctctcccaggactcaggagtcaggacacctgctgccgagggattggactggcctggggc
atcaacgagtgtgtcctatgccctcctaacacaggaaatggagtcgatgggagctgtccg
gctggatttgagaggatcaacggcacccagtgtgttgatgttaatgagtgtttgcagcca
ggcttctgtgagaacggcaactgtgtgaacactcgggggagctacagttgtgtctgcagg
caaggatacatactggacgcctctcacgggatctgtatctcccgtaaggtgatctcggag
gataagggccagtgctatcgtatcctaaactctggctctggccgtggtagctgctccgtg
cccatcctcaggaacatcaccaagcagatctgctgctgcagccgcgtgggcaaggcctgg
ggcaagaactgtgagaggtgtccctactttggatcagttgctttcaaggagatctgccca
gcagggcctggctaccactactctgcctctgccatcaagttcaaccagagggtggtggag
cagcacgggactggaggtccccctgtcatatcccagagcaccccacagaccaggccacaa
caaccagccagtagtggtgcacagactccccaaactagtccccaacaaccttcaagctca
ggctttttcactccccaaactagaccccaacagccagatggtagagctctcatacctcag
accaggccccagcagccatcgagtggaggctccctgtccccccagggcagaccacacatc
ccagccatctctgttacagcaggacccacccgggtggtgacagctcgaacccccactcag
accaaacggcctccagttgaccaacggccaatatctccagtgagacccgcacagcccctc
ctatctccggtcacgccccgcccacccatccccaggccagtgcggggtgtgtgtgagacc
atgccccaggtgtgtggacagggccgctgtgtggaccagcccggagggagacatacctgc
atctgtaacgagggataccaacacaacgctcagcagactcattgtcaagacatagacgag
tgcagggcgtctcccccgccttgcggcagcggccgctgccagaacacagaagggggctac
aggtgcagctgcccctctggataccagccgggaccccggggcaccagctgtatagatgtc
aatgagtgcatccaggctctcagtccctgttctgttggggagtgtgagaatacaccaggc
cgctacagatgtgtgtgtcctgctggcttcagagccaacttccaacagacgcagtgtcaa
gatattgacgagtgtcgtcaggttccgaacccctgtaacaacggccgctgtgagaatagc
cctggtagcttcaagtgtgtctgccgcactgggtacaagctagagggcaacacgtgtaaa
gatgtggatgagtgtgaggaccccttgaagtgtcctggtcaggcctgtgtcaactctcca
ggatcatacaagtgtgtgtcttgcccaccagggtttgggctgctcaacgaacaatgccga
gatgttgacgagtgtcgtcagacccccagcctttgcaccaatggtcgttgtgagaacact
cccgggagctacaggtgtgtttgccatacgggatacaaactacaaggcaaggcctgcaca
gatgtggatgagtgtgaggaccctttgaggtgtcctggtcaggcctgtgtcaactctcag
ggttcttacaactgtgtgtcttgcaagccaggcttcagcatgatcaatggacaatgctca
gatatagatgagtgtcgtcaatcccccggcccatgcaccaacggtcactgcgagaacacc
cagggaagctacagctgtgcgtgtctcactggctacagactgcacggtgatacctgtaca
gactcagatgaatgtgcagacccgtcccagtgccctggccaggagtgtgtcaactcccag
ggctcatacaagtgtgtgtcctgcaagccaggctttgggctggtcgacagacgctgcaca
gatgttgacgagtgcctccacagcccatctcgctgtgctaacggtcgttgtgagaacacg
gctggaagctacaagtgtgcgtgccgatctggcttcaggctacagggcaacacctgcaca
gatgtcaatgaatgtgagaacgccctacagtgtcctggtcaggagtgtatcaactctgag
ggctccttcatatgtgtggcctgtagcccaggctttgtggctggaaatggacagtgtaca
gatatcgatgagtgtcggcagacctccaacctatgtgccaacggcctctgtgaaaacact
ctcggtagctaccggtgcgtttgtcgcaccgggttcaaactgcagggcagcgtctgtatt
gacgttgatgaatgtgcagaccccccacagtgtcctgggcaacggtgtgtgaattctgaa
ggctcctacaagtgtatcgcctgcaaagctggccacagaatgcaagatgggttatgcgca
gatgtggatgaatgccagagccctgacacctgtggtgcagcgaggctgtgtgtgaacacg
gacggctcctaccgctgtgactgtcaaccaggctacagaaccactggccttggacgccaa
tgtcgagacgtcaacgagtgtctagagggggaatactgcttccctaagggagagtgtgtg
aacacagagggctcctaccgctgtgtgtgttcccagggttacaccaccagcagcgacggg
agctcctgcctagatgtggatgagtgtgccaggtcaggcccgggggtgtgccaggatggg
cgctgtgtcaacacagagggctcctaccagtgccagtgccaagtgggattcaccaccaac
ccagagaagacagcctgtctggatgtagatgagtgctcagagggagcagtgtgtcggaca
cagcgttgtgagaacaccattggctcctaccgctgtatcacctcctgtgagccgggctac
cgggtcacccgcaccggagagtgtgtcgatatcaatgagtgtgccaatgagaccgtatgc
ggagagcatgcattctgccagaacctaattggaacataccagtgcatgtgtgaccagggc
tacacagccaccagcgatgggaagggatgtgtggatgaaaacgagtgtgagacgatgcag
ggcgtgtgtggcgcggcgcgctgtgagaatgtggatggctccttcatgtgtgagtgtcca
ggcgagggggaagagtttgatacgcgctcaggacagtgcctcagcacgccccgaccaggt
cttccagtgttctctggcggctcctcctcgtcttcctccaccaccggcctcggtccccag
cgtcggcccgatgcgtcccagctgccccctgcccggcctggcgagttgagggagtgttac
tacaacaccgaggagcagcgctcgtgcagcgtcctggcccgcaacaccacccagcaggag
tgctgctgcaccgtgggccagggctggggaatgggctgccagttcgacccctgtcctcag
ctaggcacagccgagcaccaggcgttgtgccccagcggacgaggatatgtgactgggcca
ggagcgtttagctacaaagatgtggatgagtgtaaactgttccaccctgaggtgtgtaag
agcggtgtatgtgtcaacaacatccctggctactcctgctactgcaccagtggctactac
tatgacaacgtgtttctggagtgcatcgatgttgatgagtgtgaggcaggggaggacagc
tgtccagggggaatctgcgtcaacacattaggctcacacttctgtacctgcgtgcctcct
cttgtgttggacgacactcagcgcagctgtgtcaattccactggcctcgccgtggatgag
aagctgtccttctgctggcagtatgtcacaccagacctggtgtgtcagagccccctgctg
ggcggacaggtcaccttcactgagtgctgctgtctgtatggagagggctggggactgcag
tgtgctctgtgtcctgccagagactcagaggactatgaggctcggtgtaacgtcttcctg
aggcccccagagtttcctccccccttccctgaccgctacggtccggacccagggccaggt
agaggaggaggaggggggtatcgcgtgccctatggacaggactccttcccagaccccatc
ccccgcaggcctgagtacccccggcctgactatgacgactacacaccaccagggggcagc
aggtctggcttcagaggcagaacacccagcaccttcagggtcccagagatcccatacaga
cagccctcaggatacattcctgagcggtactatggcgaggacgactacggcccgcctgac
gctcctccgagacctcccttccgcaccctcccagaccctcgttctgagctctcctttggg
gcgcggccccctctccccatccccgagggcctccctctgagtctggcccccctcccggac
agtgacccctacagtgaggaggaggaggaagggccagaaccctggcgtgtgggaccccct
ttccctgacagacgggggccaggcggaggcccaaggagagtctatgagagacaatatgag
ccgtatgcaggcctgagcacagaggactgtgggatactgcacggctgtgagaacggcagg
tgtatccgtgtggcggagggatacacgtgtgactgctacgagggatacgagctggacatg
acctccatggcctgcatagacatcaatgaatgtgaggatcctgacaacgtgtgtgcgagc
ggccgatgcatcaacacagacggctcctatcgctgtgtgtgtcaccggggctacgtcatg
tcccgccggcccaaccactgtgtggcagcataa
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