Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139382275
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Entry
139382275 CDS
T10872
Name
(RefSeq) interferon regulatory factor 2-binding protein 1-like
KO
K22383
interferon regulatory factor 2-binding protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139382275
04121 Ubiquitin system [BR:
ocla04121
]
139382275
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
139382275
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Atypical E3
139382275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
139382275
NCBI-ProteinID:
XP_070982247
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All DBs
Position
24:complement(7986356..7993417)
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AA seq
632 aa
AA seq
DB search
MSSSQSSSRRQWCCYLCDLPKMPWAMIWDFSETVCRGCVNYEGADRIEFLIETARHLKIT
HGMQGDRSPGPQPTKHGPGGRDGPMEGGRPPPERFERGRGDYGAPARLPNGLHRIDDGVP
QQDVSGQSPNNARRPMVCTVPPNLMTQGLVGAPHGLLAAVPGLNTRVGGTPLTLSAPMLN
EITKRQLSMGMGVASFLSPEFEKELREKQRNAEALAELSESVRNRADDWAGRPKAVRGAL
LTLSGCTPFNVRFKKDHSLVGRIFAFDAKLTLDFELKIFAEYPCGSGNMFSSLAALVKQM
FHDSQRDSGSKMVNSGLKYVEYEKRHGAGDWRLLSELLSDSVRAFKDIPGPDVLPQPYLD
TSCSMLPTALCHMARSAPPARLRRRKASPELQGGEVVTTEEQLRQHWPMGMYPGMAIHLA
ASSLPSTSQPPPHQEGSASHSHSSDPSPITALMSVADNAGAAAGQSPREAPSSSSSGGGG
LGHSSLAVRQSSSSPMAACPAGQQRHLASRNGEPQGASNSTGATTAALPLAGASDQGAGD
PSGSSGPPLCCTICHERLEDTHFVQCPSVATHKFCFPCTRDFIRSQGAGSEMFCPSGERC
PLVGSNVPWAFMQGEVTTILAGDVKVKKERDP
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcctcccagtcgtcttcaaggcggcagtggtgctgttacctttgcgatttgcct
aagatgccatgggctatgatctgggactttagcgagactgtctgccgaggctgtgtgaat
tatgaaggggcagaccgtattgaattcctcatagagacggccaggcatttgaaaataact
catggtatgcagggtgacaggtccccgggtccacagcccaccaaacatggcccaggtgga
agagatggacctatggagggtggtaggccacctcctgaacgctttgaaaggggtagaggg
gactacggagccccagcacggctccccaacggtctgcacagaatcgatgacggggtccca
caacaagatgtcagtggacagagccctaacaacgccagacgacccatggtgtgtaccgtt
ccacccaatttaatgacacaaggccttgtgggtgctccgcacgggttgctagcagctgtg
cccggtttaaataccagagtcgggggaacccccctcaccctctctgcccccatgctgaac
gagatcaccaagaggcagctgagcatgggcatgggtgtggcctccttcctgagccctgag
tttgagaaggagctgagggagaagcagaggaacgcagaggctctggccgagctgtcagag
agtgtacggaaccgagcagatgactgggccggccgacccaaggctgtacgaggggccctg
ctcaccctctccggctgcacccccttcaacgtgcgcttcaagaaggaccacagcctggtg
gggcggatctttgccttcgatgccaagctgacgctggactttgagctgaagatctttgca
gagtacccgtgcggctcggggaacatgttctccagcttggcggcgctggtcaagcagatg
ttccacgacagccagagagactctgggagcaagatggtcaactcgggcctgaagtatgtg
gagtacgagaaaaggcatggcgcgggggactggcgactgctctctgagctactgagtgat
tcggtacgggcctttaaggacatccccggccctgacgttctcccccagccctacctggac
accagctgctccatgctgcccacagcgctgtgtcacatggcccgctcggcaccaccagcc
cgcctgcgccggaggaaggcttccccagagctccagggtggagaggtagtgaccacagag
gagcagctccggcagcactggcccatggggatgtacccgggcatggctatccacctagct
gcctcctccctacccagcactagccagccacctcctcaccaggagggctcggcctcccac
tcccacagcagcgacccctcccccatcacagcactgatgagcgtggctgacaacgcgggt
gcagccgctggccagtcacccagagaagcccctagcagcagcagtagtggtggtggaggc
ctgggccactcctccttggcagtgagacaaagcagcagcagccccatggcagcctgccct
gcagggcagcagcgccacctggcctccaggaacggggaaccccagggagctagcaactct
acaggggccaccacggcagctctccccctggctggggcctcggaccagggagcaggggac
ccctccggctcctctggtccccctctctgctgcaccatctgccacgagcgcttggaggat
actcactttgtccagtgcccgtctgttgcgacccataaattctgcttcccttgcaccaga
gactttatccggagccagggggccggcagcgagatgttttgccccagtggagagaggtgt
cccctggtaggctccaacgtgccctgggccttcatgcagggagaggtcactaccatcctg
gctggagacgtcaaagtgaagaaggagcgcgacccctaa
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