Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139382295
Help
Entry
139382295 CDS
T10872
Name
(RefSeq) rho GTPase-activating protein 35-like
KO
K05732
glucocorticoid receptor DNA-binding factor 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04510
Focal adhesion
ocla04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
139382295
09142 Cell motility
04810 Regulation of actin cytoskeleton
139382295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139382295
Membrane trafficking [BR:
ocla04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
139382295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP_pG1_pG2
RhoGAP
RhoGAP-FF1
FF_RHG35_4th
Ras
GTP_EFTU
Cdh1_DBD_1
NOG1
FF
Motif
Other DBs
NCBI-GeneID:
139382295
NCBI-ProteinID:
XP_070982283
LinkDB
All DBs
Position
24:5378066..5485139
Genome browser
AA seq
1541 aa
AA seq
DB search
MMMAKKQDAKAPTYNLVVVGLSGTEKEKGQCGVGKSCLCNRFVRPSADDFYLDHTSVLST
SDFGGRVVNNDHFLFWGETGRVLEEGPECRMHVVEQTEFIDDQTFQPHRSTALQPYIKRA
ASNKLASAEKLMYFCTDQLGLEQDFEQKQMPEGKLMVDGFLLCVDVSRGMNRNFDDQMKF
ITNLYNQLAKNKKPVVLVLTKCDEGVERYIKDSHTFALAKKNLQVVETSARSNVNVDLAF
LTLVQLIDKGRGKPKIIPYFEALKQQSQQIASAKDRYEWLVSRIVKNHNETWPNINRRMQ
TSSEYKEYVFLEGTAKAKKLFQQHVHRLKQEHIERRRRAYLSTLPQALGSLVPELDEIDH
LSWSGVQKVLETKQDFSHWFVVLDDTPWETTPHIDNMEDERIPQDLLETPVAETIYESHL
EHLKNERKRAEMRWEFKEKLSASPFITAGKPWEEARSFIMNEDFYQWLEEPEYLDIYNRH
QKEIIDRAKEDFQELLLEYSELFYELEVDAKPSKEKMGAIQEVLGEEQRFKALQKLQAER
DALVLKHIHFVYHPTKETCPNSPHCVDCKIEQVLASKFPTRYSFFDSHKPGDGNADRINL
VILGKDGLGRELANEIRALCTNDDRYVLDGKMYELSLRPIEGNVRLPVNSFHTPTFTPHG
VLCLYNSKESLSYIVESIEKLRESTLGRRENSLFQLPMNLLLVTKRGVGSIRDIGGETAH
TLILQGQQVAGKLQCGYLDPASPGVGYGRNVNEKQINQVLKGLLECRRPPGSIGSSSPPL
PPSFRDSHSQPIPETDLRIVMCLMCGDDYDVEQLLSPLLLPQHCRPASSLSSGTSVLLEL
TVGAQRHTIDLSLLSFHSSFALRKSRLVHGYIAVYSARRKASMETLCAFLCEVQDIIPVQ
LLAVGESQAELSDSEAAREQVSQGEELAREIEARFNTVVCGPGGVVGGLHRIDLFQPFLK
EVVEKRTIVEATHMYDNVAEACTTESMSPARCNSPSPINTLLDSEEDVEPSPPYPDVTLT
SHLGGFKLPDLESSDAFSVISEISTFESKLNNKVPPQVRPKPTIRKVNLGPYMDQQGTNR
RSLPPAVTWAPGSDGGYDPSDYAEPVDAVTKQRPTEEESIYSVPHDSTQGKIITIRNANK
HSNGGGNGSDSEADSSSLERRRKMSALGVKPRLYRDRSKRLGKFSSFRTSFSIGSDDELG
PPKAPEELGGAHKGDNSINEEGEDPKRRNILRSLRRNTKKPRPKPRHSISKVESNYFGVP
LANVVTPDRPIPLFIDKCIRYIEATGITTEGIYRVSGNKSEMESMQRQFDQDHNLDLVEK
DFTINTVAGAMKAFFSELPEPLVPYSHQIELVEAFKINDRDQRVHAMKDILRRFPRENYD
VFKYVINHLNKVSQNNRLNLMTSENLSICFWPTLMRPDFTTMDALTATRTYQTIIESFIH
QCAFFFYNQPLSDTPGGHASPTATLSSHGGTSAYSSLAYNSPSLTPAPAPYVMPATPPVI
PHYGPPHTQIQHSPPHTPQSPIQALLPPLHPHHPPTEQHML
NT seq
4626 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggcaaaaaagcaagatgcaaaggcgcccacctacaacctggtcgtggtgggc
ctgtccggcacggagaaggagaaggggcagtgtggtgtgggcaagtcctgcctgtgcaac
cgcttcgtccgtcccagcgcagacgacttttacctggaccacacctccgtgctaagcacc
agcgacttcgggggacgtgtggtgaataatgaccacttcctgttctggggggaaacgggg
cgggtgctggaggaggggccggagtgcaggatgcatgtggtggagcagacagagttcatt
gatgaccagacgttccagccacaccgttccacagccctccagccctacatcaagagggct
gcctccaacaagctggcctctgcagagaagttgatgtatttctgcacggaccagctaggg
ctggagcaggactttgagcagaagcagatgccagaggggaagctaatggtggatggcttc
ctcctctgtgtggacgtcagcaggggcatgaaccgcaactttgacgaccagatgaagttc
atcactaatctctacaaccagctagccaagaacaagaagccagtggttctggtgctcacc
aagtgcgacgagggggtggagcgctacatcaaggactctcacacctttgccttggccaag
aagaacctccaggtggtggagacgtcagcacgctccaacgtcaacgtagacctggccttc
ctcaccctggtgcagctgatagacaagggccggggcaaacccaagatcatcccctacttt
gaggccctgaagcaacagagccagcagatcgcctcggctaaagaccgctatgagtggctg
gtcagccgcatcgtgaagaaccacaatgagacgtggcccaacataaaccggcgcatgcag
acctcctcagagtacaaggagtatgtcttcctggagggcactgctaaagccaagaagctc
ttccagcagcacgtccacaggctcaaacaagaacacattgagcgaaggcggagggcctat
ctcagcaccctgcctcaggcactgggttccctagtccctgagctggatgagatcgaccac
ctgagctggtccggggtccagaaggttctggagaccaagcaagacttttcccattggttc
gttgtgttggatgacaccccctgggagaccaccccacacatagacaacatggaggatgag
aggattccccaggatctcctggagaccccggtggctgagacgatttacgagagccacctg
gagcacctgaaaaatgagcgcaaacgggcggagatgaggtgggagttcaaggagaagctc
agtgcctctcccttcatcacagcaggcaaaccctgggaggaggcacgcagcttcatcatg
aatgaagacttctatcagtggctcgaggaaccagagtacctagacatctacaacaggcac
cagaaggagatcattgaccgagccaaggaggacttccaggagctgctgctggagtactca
gagctcttctatgagctagaggtagacgccaagcccagtaaggagaagatgggggccatc
caggaggtgttaggggaggagcaaaggttcaaggccctgcagaagttgcaggcagagagg
gacgctttggttctcaagcatatccactttgtctaccaccccaccaaggagacctgccca
aatagcccacactgtgtggactgtaagattgaacaggttctagcctccaagttccccact
cgatactccttcttcgatagccataaaccgggcgacgggaacgcagatcgcataaacctg
gtcattctgggtaaagatggcctggggagagaactggccaatgagatcagggctttgtgc
accaatgatgaccggtacgtgctggatgggaaaatgtatgagttgtccctccggcccata
gagggtaacgtgcgtctgccggtcaattccttccacacgcctaccttcaccccccatggc
gtcctttgtctctacaactctaaggagtcactatcttacattgtggagagcattgagaag
ctcagagagtccacgctaggccgaagggaaaacagtctatttcagctgcccatgaacctg
ctcctagtcaccaaacggggagtagggtccatcagggacattgggggggaaacggcccac
acacttatcctccaggggcagcaggtggctgggaagctacagtgtggttatctagacccc
gcctcccctggggtgggctatggacgcaatgtgaacgaaaagcagatcaaccaggtgtta
aaaggtctgttagaatgccgtaggccccctgggagcataggcagcagctcccctccttta
cccccttccttcagagactctcactcccagcccatccccgagacagacctgcggatagtc
atgtgcctgatgtgtggcgacgattatgacgtggagcagctcctctcgcccctcctgctg
ccccagcactgtcggccggcctccagcctgagcagtggcacgtccgtgctcctagagctc
acggtgggggcccagaggcacaccatcgacctctccctgctctccttccactcctcattt
gccctacggaaaagccggttggtgcacggctacattgccgtgtattctgccaggcgcaag
gcgtccatggagaccctgtgtgcgttcctgtgcgaggtgcaggacatcattcccgtgcag
ttgcttgcggtgggggagagccaggctgagctgtcggactctgaggcggccagggagcag
gtgagccagggggaggagctggcccgggagatcgaggccaggtttaacacagtagtgtgt
gggcctggaggggtggtgggaggcctgcacaggatagacctcttccagcccttcctgaag
gaggttgtggagaaacgcaccatagtggaggccacacacatgtacgataatgtagcagag
gcctgcaccactgagagcatgagcccggcccgctgcaattcccccagccccatcaacacc
ctgctagactctgaagaggacgtggagccctcgcctccctaccctgacgttaccctcacc
tcccacctggggggcttcaagctccccgacctggagtccagcgatgccttctcagtcatc
tccgagatcagcaccttcgagagcaagctcaacaacaaggtccccccccaggtgcggccc
aagcccaccatacggaaagtcaacctggggccctacatggaccagcaagggaccaaccgt
cgctccttaccccctgctgtcacctgggcgccgggcagcgacggtggctacgacccctcg
gactacgccgagcccgtggatgccgtgaccaaacagcggcccacagaggaggagagcatc
tactcggtgccccacgacagcactcagggcaagatcatcaccatccgcaacgccaacaag
cattctaacggcgggggcaatggctcggatagcgaggctgacagcagctccctggagcgg
aggcggaagatgtctgctctgggggtgaagccgcggctgtaccgcgaccgctcaaaacgc
ctgggcaagttcagcagcttccgcactagcttctccatcggcagtgacgacgagctgggg
cctcccaaagcaccagaggagctgggcggggcgcacaaaggggacaactccattaacgag
gagggcgaggaccccaagaggaggaacatcctcagaagcctgcgcagaaacaccaagaaa
ccacggcccaagcccaggcattccatatccaaagtagaaagcaactactttggcgtgccg
ttggccaacgtggtgacacctgaccgacccatcccgctcttcattgacaagtgcatccga
tatattgaggcaacgggtatcactacagaagggatctacagggtgagtgggaacaagtca
gagatggagagcatgcagaggcagtttgaccaggaccataacctggacctggtggagaag
gacttcactatcaacacggtggccggggccatgaaggccttcttctctgagctgccagaa
cccctggtgccctacagccatcagatcgaactggtggaggccttcaagatcaacgatcgg
gatcagcgagttcacgccatgaaggacatcctgcgccgcttccccagggagaactatgac
gtcttcaaatacgtcatcaatcacttgaacaaggtgagccagaataaccgtttgaacctg
atgaccagtgagaacctgtccatctgtttctggcccactctgatgcggcccgacttcacc
accatggatgccctgacggccacacgaacctaccagacaatcatcgagtccttcatccac
cagtgtgctttcttcttctacaaccagcccctgtctgacacccctggcgggcacgcctcc
cccacagccaccctctcctcccacgggggaacctcggcctactcctccttggcgtacaac
tctccctccctcacaccggccccggccccttacgttatgcccgccacgccgcccgtcatc
ccacactacgggccgccccatacccagatccagcattccccgccccacaccccccagtcc
cccatccaggccctactgccccccctgcacccccatcacccccccacggaacaacacatg
ctgtga
DBGET
integrated database retrieval system
