Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139382362
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Entry
139382362 CDS
T10872
Name
(RefSeq) cell adhesion molecule DSCAML1-like
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Cell adhesion molecules [BR:
ocla04515
]
Immunoglobulin superfamily
DSCAM family
139382362
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139382362
NCBI-ProteinID:
XP_070982457
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Position
24:complement(5892206..6086116)
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AA seq
2139 aa
AA seq
DB search
MTVPVMGGYGRRDQISVRSSEFASLGLGLERSPVSIVTTPARSLAWPNAAPCTRRDCTTF
LRNIPAIYGMWLVTLFLLYSLQEVNSEDVVSTRLYFVNASLQRVTFSSSVGVSLPCPAGG
APHAVLRWYLATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSYIHDNEYFCTAENQAGK
IRSPSIHVKAVFREPYTVRVADQRSMRGNVAVFKCLIPTAVQEYVSVVSWEKDTVSMVPG
NRFFLTSFGALYISEVQKEDALSTYRCITKHKYSGETRQSNGARLSVMDPTESTPSVLDS
FQSGEVQVGRNVELPCIASGYPNPTIRWLKDGRPLPADSRWTRRLTGLTVSDLRLDDSGN
YICEVTNSFGSKEVTGHLNVIEPLRVTLSPKNLKTGISSTVILSCAVQGSPHFTLSWYRN
TEPVLPDQHFSIQGAHNETLFISAAQKRHSGAYQCFATRKGQTAQDFSIILLEDGTPRIV
SSFSERVVVPGEPFSLMCAAKGAPPPTITWTLDDEAVARDPSRVRASQYTLSDGSTVSHV
NVSSPEIRDGGVYRCAARNSAGSAEYQARINVRGSPRIRDMRNITAVAGRNTFINCRVIG
YPYYSIKWYKEGLLLPDNHRQVVYENGTLKLSDVQKVLDEGAYLCSVLIQPQIFISQTVY
VQVKVPPLIQPFDFPPTSIGKLMYIACVVSSGDMPIHITWRKDGQEVAPSSGVNIETKEY
MSSLQIGKVSLKHNGNYTCIASNDAATVSSERQLTVTVPPQFVVQPNNQDGIYGKAGVLN
CSVDGYPPPKVMWKHAKGIGNPQQYHPVPLTGRIQIMGNGSLLIRHVLEEDRGYYLCQAS
NGVGSDISKSMVLTVKIPAMITSHPNTTMAIKGQIKELNCTARGEWPIIIRWERGDTVID
PDRNPRYAITTSPNEKSDEVLSTLKLKPAERGDSVFFSCHAINSYGEGRGLIQLTVQEPP
DPPELEVREVKDRSMNLRWTQRFDGNSIITSYDIEYKNKTDPWELKHATRKISPTNNQAN
IVDLHPAQIYSIRMFSYNKIGHSQASKELTISTEEAQPDGPPVEVFLLPMTSQSIRVTWK
APRKELQNGVIRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQA
FNRAGTGPSSSEINATTLEDVPSQPPQNVRAISVTSDEAVITWAEPPRLTLHGVLKGYRV
VFWSLFPDGEWGEMQNITTTREQVELRGLEKFTNYSVQVLAYTQAGDGVRSNVLYIQTRE
DHPGPPAGIKAVPSSTSSVVVSWLPPHKPNGIIRKYTIYCSSPGSGQPAPSEYEANPELL
FYRVTHLNRGQQYLIWAAAVTTAGRGNISDKVTVEPAGKAPAKILSFGGTVTTPWMKEVR
LPCSSVGEPTPTIKWTKDSEDTAIPVTLDGQRLIMANGTLVLRSVKAEDYGYYTCTATNT
LGFDTIIVNLLVQVPPDQPRLTVSTTSSTSITLAWIPGDNGGSSIRGFVLQYSVDNIEGW
RDVFISSSERSFKLDNLRCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPQFNKDHPVF
THVNSTHARLNLQGWASGGCPITAVLLEFRPKGNWAWQNVRTNATADVFLAELREATWYE
LKMKACNSAGCGNQSSQFATLDYDGSTIPPIKSARPEGDDVKKLFSIGCPVILVTLVVAL
LFIIRKKRKEKRLKRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIED
KEGIKQIGEDKATIPVTDTEFSQNVNPQSFCTGVSVHHPALIQNTGPLIDMSDIRPGTNP
VSRKSVKSTHSTRNRYSSQWTLTKCQSSTPARTLTSDWRTVGSQHGITVTESDSYSASLS
QDTDKGRNSMVSTESASSTYEELARAYEHAKLEEHLQHAKFEITECFISDSSSDQMTTGT
NDNADSMTSMSTPSETGLCRFTASPPKPQEYDRGRPTNVAVPIPHRANKSEWTGKSDYCN
LPLYMKTDPFFRKQSELRDPCPVVPPREASIRSLAQRAYHTQGRHMTLDSSKQQQALTVG
HAGLAGLSASGGASGGGGGVGGATGGPSGGSSTSSLPQRTLTMPGSSSSSAQSAAAATDA
VAGGDSRDPLLESSSTGPGRLERQKQAAGGAYSKSYTLV
NT seq
6420 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcccggttatgggagggtacgggaggcgggaccagatcagtgtccgttcctcg
gagtttgcgagtctgggactagggctggagagatcgccggtgagcatcgtcaccactcca
gcacggagcctcgcttggccgaacgctgcgccgtgcactcgtcgggattgcacaacattc
ctgagaaatatacctgctatttatggcatgtggctggtaactttattcctgctgtactct
ttacaagaagtgaacagtgaggatgtggtctcgacgcggctgtactttgtaaacgcctcc
ctgcagcgggtgaccttctccagctcggtcggggtgtccctgccctgccccgcgggcggc
gcaccccatgccgtcctgcgctggtacctggccaccggcgacgacatctacgacgtgccc
cacatccgccacgtgcacgccaacggcaccctccagctctaccctttctcgccatccgcc
ttcaacagctacatccatgacaacgaatacttctgcaccgcagagaaccaggccggcaag
atccgcagccccagcatccacgtcaaagcagtgttcagggagccctatacggttcgggtg
gcagaccagcggtccatgcggggcaacgtggccgtgttcaagtgcctcattcccaccgca
gtgcaggagtacgtcagcgtggtgtcctgggagaaagataccgtctccatggtgccaggg
aaccgtttcttcctgacatcgttcggggccctgtacatatcagaggtccagaaggaagat
gccctgtccacctaccgctgcatcaccaagcacaaatacagtggagagactcgccagagc
aatggagccaggctgtctgttatggaccctacggagtccaccccctcagtgttggacagt
ttccagtccggcgaggtccaagtgggacgtaatgtggagctgccctgcattgcctcgggc
taccccaaccccaccatccgctggctgaaggacgggcgcccgctgcccgctgactcccgc
tggacgcgccgcctcacgggcctgacggtcagcgacctgcgtctggacgacagcggcaac
tacatctgcgaggtcaccaacagcttcggctccaaagaggtgaccggtcacctcaacgtc
atcgagccgttgagagtgactctgtctcccaagaacctgaagacgggcatcagcagcacg
gtgatcctgtcgtgtgctgtgcagggttctccccacttcaccctgtcctggtaccgcaac
acagaacccgtcctccccgaccagcacttctccatccagggggcccacaacgagaccctg
ttcatctccgctgcccagaagagacattcgggagcctaccagtgcttcgccacccgcaag
ggccagaccgcacaggacttctccatcatactgctggaggatggtacgccccgtatcgtg
tcctccttcagtgagcgtgtggtggtcccgggggaacccttctccctcatgtgcgctgcc
aaaggtgcccctccccccaccatcacctggactctggatgacgaggctgtggccagggac
ccgtccagggtgagggccagccagtacacgctgtcggacggctccaccgtgtcccacgtc
aacgtcagcagcccggagatccgcgacggaggggtgtatcgctgcgccgcacgcaactcg
gccggtagcgccgagtaccaagcgcgcataaacgtaagaggttctcccaggatcagggat
atgcgtaacatcacggcggtggctgggaggaacacctttataaactgccgcgtgattggc
tatccctactactcaatcaagtggtacaaggagggacttctgctgcccgacaaccatcgt
caggtggtgtatgagaatggtactctgaagctaagtgacgttcagaaggtcttggacgag
ggggcgtacctctgcagcgtgctcatccaaccacagatcttcatcagccagaccgtctac
gtccaggtcaaagtgccccctctgatccaaccctttgacttcccccccacctccattggg
aagctcatgtacatcgcctgcgtggtgtcgtctggcgacatgcccatccacatcacctgg
cgtaaggacggccaggaggtcgcgccctcgtccggcgtcaacatcgagaccaaggagtac
atgagctcgctgcagatcggcaaggtgtcgctcaagcacaacggcaactacacctgcatc
gctagcaacgacgccgccaccgtcagctctgagaggcagctcactgtcacagtgcctcct
cagtttgtggtccagcccaataaccaggacgggatctatggcaaggcgggggtcctcaac
tgctccgtggacggatacccgcctcccaaagtcatgtggaagcacgccaaaggtataggg
aacccccagcagtaccacccagtgcctctgaccggtcggatccagatcatggggaacggc
tccctgctgattcgtcacgtcctggaggaggaccggggctactacctctgtcaggcctcc
aacggcgtgggctccgacatcagcaagagcatggtcctgacggtcaagatcccggcaatg
atcacgtcgcaccccaacaccaccatggccattaagggccagattaaggagctgaactgc
acagcgaggggggaatggcctatcatcattcgttgggagcgcggtgacacggtcatcgac
cccgaccgtaaccctcgctacgccatcaccaccagccccaacgagaagagtgacgaagta
ttgtctacactgaagctaaaaccagcagagcgaggtgactctgtcttcttctcctgccat
gccatcaactcatatggagagggccggggcctcatccagctcactgtgcaagagccccca
gaccctccagagttggaggtgagggaggtgaaggatcggagtatgaacctgcgctggacc
cagagatttgacggcaacagcatcatcaccagctacgacattgagtacaagaacaagaca
gatccttgggagttgaagcatgccacccgtaagatctctcccaccaataaccaggccaac
atcgtggatctacaccctgcccaaatctacagcatccgcatgttctcctacaacaagatc
ggacacagtcaagccagcaaggagctcaccattagcacagaggaagcacagccggatggt
cctcctgtggaggttttcctcctgcctatgacctcgcagagcatccgcgtcacctggaag
gcccccagaaaggagcttcagaacggggtgatccggggctaccagatcggttaccgtgag
aacgggccgggcagtaacggccagtacagcatcgtggagatgaaggccacgggggacagc
gaggtgtacaccctggacaacctgaagaagtttgcccagtatggggtggtggtccaggcc
ttcaacagggccggcaccggcccctccagctctgagatcaatgctaccacactggaagat
gtgcccagccagccgccccagaacgtgcgggccatctcggtgacatcagacgaggcggta
atcacgtgggcagagcccccgcgtctgacgctgcacggcgtgctgaagggctaccgggtg
gtcttctggtccctcttccccgacggagagtggggagagatgcagaacatcacgacaacc
cgggagcaggtggagctgagagggctggagaagttcactaactacagtgtgcaggtgctg
gcctacacccaggctggggatggggtcaggagcaatgtcctgtacatccagacccgtgag
gaccaccctggccccccggctggcatcaaagctgtgccctcttccaccagcagtgtggtg
gtttcctggctacccccgcacaagcccaatggaatcatccgcaagtacaccatctactgc
tccagccccggatcaggccaaccggcccccagtgagtacgaggccaaccccgagctgctg
ttctaccgggtcacccacctgaaccgcggacagcagtacctcatctgggccgctgccgtc
accaccgccggacgggggaacatcagcgacaaggtcactgtggagcctgctgggaaggca
ccagctaagatcctatcgttcggaggtacggtgaccactccctggatgaaggaggtgagg
ctaccctgcagctcagtgggcgaacccacccccaccatcaaatggaccaaagacagtgag
gacacagccatcccggtaactctggacggtcagaggctcatcatggccaatggcacgctg
gtcctgcgctcggtgaaagctgaggattatgggtactacacgtgcacggccaccaacacg
ctgggctttgacaccatcattgtcaacctgctggtgcaagttcctccggaccagccccgt
ctgactgtctccaccacctcctccacctctatcaccctggcctggatccccggagacaac
ggaggatcctccatcagaggtttcgtgctgcagtactcggtggacaacatagaggggtgg
agggatgtgttcatcagttccagtgagaggtccttcaagctggacaacctgcgctgtggc
acctggtacaaggtcaaactggccgccaagaacagcgtgggagccggacgcatcagtgaa
atcatcgaggctaagacccacggacgagagccccagttcaataaggaccatccggtgttc
acccacgtcaactctacccacgcccggctcaaccttcagggctgggcgagcggtggctgc
cccatcacggccgtactgctggagttcagacctaagggcaactgggcgtggcagaacgtg
cgcaccaacgccaccgccgacgtgttcctggctgagctccgcgaggccacctggtacgag
ctgaagatgaaggcgtgtaacagcgccggctgcgggaaccagagctctcagttcgccacg
ctggactacgacggcagtaccatccctcccatcaagtcagcgcggcccgaaggcgacgat
gttaagaagctcttctccattggctgccccgtcatcctggtcactctggtcgtcgccctg
ctcttcatcatccgcaagaaacgcaaagagaagagactgaagagactgagagatgccaaa
agcctggctgagatgctgatcagtaagaataaccggagctttgacacccctgtgaagggg
cccccccagggcccccgactccacatcgacatccccagagtccagctgctcatcgaggac
aaggagggcatcaagcagatcggtgaagacaaagccaccatcccagtgacggacacagag
ttcagccagaacgtgaatccccagagcttctgtacgggggtgtctgtgcatcaccccgcc
ctcatccagaacaccggccctctgattgacatgtccgacatcagaccagggacaaacccg
gtgtcgaggaagagcgtgaagtcgacccacagtacgaggaaccgctactccagccagtgg
accctgaccaagtgccagtcgtccacgcccgcccgtaccctcacctccgactggcgcacc
gtgggctcccagcatggcatcaccgtcaccgagagcgacagctacagcgccagcctctca
caggacactgataaagggcgtaacagcatggtgtccacagagagcgcgtcctccacctat
gaggagctggcacgggcctatgaacacgccaagcttgaggagcacctgcagcacgccaag
tttgagatcaccgagtgcttcatctccgacagttcctcagaccagatgaccacgggcacc
aacgacaatgccgacagcatgacctccatgagcacgccgtccgagacgggcctgtgtcgc
ttcaccgcctcgccacccaaaccccaggagtacgaccgcggcagacctaccaacgtagcc
gtgcccatcccccaccgcgccaacaagagcgagtggactggcaaaagtgactactgtaac
cttcccctctacatgaagacagaccctttcttccggaagcagtcggagctgcgtgacccg
tgcccggtggtgccgccccgcgaggcctccatccgcagcctggcccagcgggcgtaccac
acccagggccgtcacatgactctggactcctccaagcagcagcaggctctgactgtgggc
cacgctggcctggccggcctcagcgcctcagggggagcatcagggggtggtggtggtgta
ggaggggcgactggagggccgtctggtggttccagcacctcctccctgcctcagaggact
ctcaccatgcccggctcctcctcttcctctgcgcagagcgctgcagccgctaccgacgca
gtcgcgggaggagactctagagaccctctgctggagagcagctcgacaggcccgggcaga
ctagagagacagaagcaggcggctggcggggcctactccaaatcgtatacactggtgtag
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