KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139382386
Entry
139382386         CDS       T10872                                 
Name
(RefSeq) cullin-5-like
  KO
K10612  cullin 5
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    139382386
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ocla04121]
    139382386
   03400 DNA repair and recombination proteins [BR:ocla03400]
    139382386
Ubiquitin system [BR:ocla04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul5 complex
    Cullin
     139382386
DNA repair and recombination proteins [BR:ocla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     139382386
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 PTPlike_phytase
Other DBs
NCBI-GeneID: 139382386
NCBI-ProteinID: XP_070982496
LinkDB
Position
24:15708464..15718185
AA seq 780 aa
MATSNLLKNKGSLQFEDKWDLMRPIVLKLLRQEAVTKQQWFDLFSDVHAVCLWDDKGPAK
IHQALKEDILDFIKQAQNRVLSHQDDTALLKAYIVEWRKFFTQCDILPKPFCQLEITLMG
KQGSNKKSNVEDSIVRKLMLDTWNESIFSNIKSRLQDSAMKLVHAERLGEAFDSQLVIGV
RESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADTKLRE
EEKRAVRYLETRRECNSVQALMECCVNALVTSFKETILAECPGMIKRNETDKLHLMFSLM
DKVPSGIEPMLKDLEDHIMNAGLADMVAAAETITSDSEKYVEQLLMLFNRFSKLAKEAFQ
DDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTT
LSKKLTSEEIELKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWL
REVGMPADYVNKLARMFQDIKVSDDLNQVFKEMHKHNKLALPADSVNIKILNAGAWSRSS
EKVFVSLPTELEDLIPEVEDFYKRNHSGRKLHWHHLMSNGIITFKNEMGHYDLEVTTFQL
AVLFAWNQRPRERISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLSYEPSVSSPKDF
TDSTLFFINQDFSLIKNSKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAII
QIMKMRKRISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIKRDETDINTFIYMA
NT seq 2343 nt   +upstreamnt  +downstreamnt
atggcgacgtcgaatttgttaaagaataaaggctccttgcagtttgaggacaagtgggac
ctgatgaggcccatcgttctcaagctactgagacaggaggctgtcaccaagcagcagtgg
tttgacctcttctcagatgtccatgctgtgtgtctgtgggatgataagggcccagctaag
atccaccaggcgctcaaagaagacatcctagacttcatcaaacaagctcagaatcgtgtg
ttgagtcatcaggatgacacagcgttactgaaggcctacattgtggagtggcgaaagttc
ttcacacagtgtgacatcctgcccaaaccgttctgtcagctggagattacactgatgggg
aagcagggcagcaacaagaagtctaacgttgaggacagcatcgtacgcaagttgatgttg
gacacatggaacgagtcgatcttctccaacataaaaagccgtcttcaggacagtgctatg
aagctggttcacgctgagaggctgggagaggcttttgactcccagctggttataggagta
cgagaatcatacgtcaacctgtgctctaatcctgaagacaagctccagatctacagagat
aactttgagaaggcctacctggactcaactgagaggttttacagaacacaggccccatca
tacctacagcagaatggagtccagaactacatgaaatatgcagacacaaagctaagggaa
gaggagaagagggcagttcgatacctcgagactcgtcgtgaatgtaactctgtccaagca
ctgatggaatgttgtgtgaacgctctggtgacgtcgtttaaagaaaccatcctggccgaa
tgtcccggcatgatcaaacgcaacgagacagacaagctccacctgatgttttccctgatg
gataaggttcctagtgggatagagcccatgctgaaagatctggaggatcacatcatgaac
gctgggctggctgatatggtggctgctgcagagactatcacttctgactctgagaagtac
gtggagcagctgctgatgttgtttaaccgtttcagtaaactggcgaaggaggcttttcag
gacgaccctcgattcctcactgccagagacaaggcctacaaagctgtagtgaacgatgcc
accatctttaaactggagctgcccctcaaacagaaaggggtaggtctgaaaacccagcca
gagtcgaagtgtccagagctgctagctaactactgtgacatgctgctgaggaaaaccacc
ctgagcaagaaactcacctcagaggagatagaactcaaactcaaagaagtgttgctggtg
ttgaagtatgttcagaataaggatgtgtttatgaggtaccataaagcccacctgaccaga
agactgatcctggacatctcagctgacagtgagatagaagagaacatggtggagtggctc
agggaggtggggatgcctgcagactatgtgaataagctggccaggatgttccaggacatt
aaagtatcggacgatctcaaccaggtcttcaaggagatgcacaaacacaacaagctggct
ctaccagctgacagtgtgaatataaagatcctgaatgcgggggcgtggtcgaggagcagt
gagaaggtgtttgtatctctgcctactgagctggaggatctgatcccagaggtagaagac
ttctacaagaggaaccacagcgggaggaaattacactggcaccacctcatgtccaatggc
attatcaccttcaagaatgaaatgggtcattatgaccttgaggtcacgacctttcagcta
gctgtcctattcgcctggaaccagcggccgcgggagcgaatcagctttgagaaccttaaa
ttggctaccgagctgcctgatgctgagctacgacgcacactctggtctctggtagcgttc
cctaagctgaaaagacaagttttgtcctatgagccttcagtctcctcccctaaagacttc
actgacagcaccctgttcttcatcaaccaggacttttctctcattaaaaactccaaggtc
cagaaaagaggcaagattaatctgattggtcgattgcagctgaccacggagcgaatgaga
gaggaggagaacgagggcattgtccagctgagaatattaagaacccaggaggccatcatc
cagattatgaagatgaggaagaggatcagtaacgcccagctacagacagagctggtagag
atccttaagaacatgttcctgccccagaagaagatgatcaaggaacagatcgagtggctc
atcgaacacaaatacatcaaacgggacgagactgacatcaacacctttatctacatggca
tag

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