Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139382470
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Entry
139382470 CDS
T10872
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04517
IgSF CAM signaling
ocla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
139382470
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139382470
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139382470
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
139382470
Intermediate filaments
Intermediate filament-binding proteins
139382470
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
TMP_3
Motif
Other DBs
NCBI-GeneID:
139382470
NCBI-ProteinID:
XP_070982638
LinkDB
All DBs
Position
24:complement(7785456..7853616)
Genome browser
AA seq
2718 aa
AA seq
DB search
MANASTDLDNAEAQRQLNNNNTRLAGSSGHWETEVTSSKLFECSRIKALAEERDAVQKKT
FTKWVNSHLARVSCRIADLYNDLRDGYMLTRLLEVLSGEMLPRPTRGRMRIHCLENVDKA
LQFLKEQRVHLENVGSHDIVDGNHRLTLGLIWTVILRFQIQVIKIECDDNRETRSAKDAL
LLWCQMKTAGYSEVHIQNFTTCWRDGLAFNALIHRHRPDLIEFHKLIRSNATHNLQQAFN
IAEQNLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALRVEGKRVGKVLDNAIE
GQKMIDRYEALASELLEWIEKTIGIISNQKFANSLTGVQQQLQAFTTYCTIEKPIKFQEK
GNLEVLLFTIQSKLRANNQKPYVPHEGKLISDINKAWERLEKAEHERGVALRQELIRQEK
LELLAQRFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADISSYEERIG
VVVELAGEMETEGYYDIRRISARKENILGQWSLLKELVVGRKARLEKNLALQKTFQDMVY
MIDWMEDMQVQLLSKDFGKHLLEVDDLLQKHSLQEADITAQAERVQTLNSAALKFTTIEG
YQPCDPQVICNRVNHVSTCLEELKQLAAKRRSELEESQHLWAFFQEVEESEAWIREKSSI
LATQTCGKDLSSVLRLLQKHKTLAGELLAHRSLLQQTMKKGKQILMEKSFGTGGIQERIM
EVKGEWKRLEDQAAQRLGHLQEALHFFQFSTETDDLLAWLQDAYRLVSSEDFGHDEYSTQ
SLLKKHRGVCEAVDKHRMHVVTLRKHMVALPLHYRELDEVQSRMGEAEQLYTEVAEVAVL
RQQWLHDALAVYLMFSEVNACEVWIDEKEQWLNKMEVPERLEDVEVIAHRFESLDQEMNS
LMGRILDVNQIVQQLLDSGHPSSTEVRGCQDHLNSRWNRIVEMVEQKKDHLDSVLRLQNY
LLECAEIKSQIQEKRKAIDATQYVGSDLGGVLALQRRLSTMEGALAVLEPKLLHLQQEAE
ELAISHPAKAMEVLEHFEGISVEWEELKRTLQGCEDSLMVAGRLQQFIQDLDSFLTWLVH
TQTAAASDELPNALEEAERLINRHAALKEEIGRYEEDYERLQAVNELLEAEEAPLPYAAL
QQWLQKLDVGWNKLLEMWESRREVLVQAHIFHLFLRDVKQAEAFLNNQESALAHVELPAT
VETVEAAIKKHKDFTTTMELNLHRIKAVIEAGESLISQSNIYSDRIRERVDTLANRGNQN
RELAQQWLERLNGQWGLQRLLQDCHELGDWVAEKMLMARDTSRDETQKLHKKWLKHQAFM
AELSQNKEWLEKIEREGQQLIQEKPELSPVVRRKLGEIRECWQDLESTTQAKARQLFEAN
RADLLVQSYVSLDHRLHQLEGQLCYVDQGQDLTSVNKQLKKLQTMECQMEEWYKEVGELQ
VAAASIPQQGQVMETVGERQAAVETRIVRLIEPLKERRRILLASKEVHQVGRDLEDEILW
VQERLPAATSQEHGSSLQAVQQLMKKNQTLQRELQGHRARVEDVLERANVIASIRSPEAD
CVRAGLEQLSGLWGLLWAETERRQLVLDAMYQAQQYYFDTAEVEAWLSEQELHMMNEEKG
KDEPSTLQLLKKHLVLEQTIEDYAETIGLLSQQCRQLLEMGHPDSEQISKCQSQMDRLYV
SLKDLVEERKSRLEQQYWLYQLNHEVDELEQWIAEREVVASSPELGQDFEHVTILQEKFT
EFASETGSLGQERVTAVNQMVDELIDYGHAEAATIAEWKDGVNEAWADLLELMETRAQML
AASHQLHKFFTDCREILAQIDDKQRRLPEVRARQGGTANTSTLQRLMHSFEHDIQLLVTQ
VRQLQESAGQLRTIYAGQKAEAIAGREQEVMHCWKELLTSCEECRVQITTATDKLRFFGV
VRDQIMWMDSIISQIGTGDNPRDVSSVEVLMNYHQSLKSEVETRSKSVLQCIEMGKMLLA
ARNPAAEEIKEKLDKVVAKQYELSEKWDKHWEVLQHMLEVHQFAQEAVVAEAWLTAQEPF
INSKELGASVDEVEQLIRRHEAFRKAAATWEERFSSLRRLTTVEKMKAEQSKLPPTPLLG
RKVFLDPQETSPARSQGSPLMRRIIYEQAEHRAERPSQEPLPSSVARRLGSTVANYTPIM
NGSSGYRNSLEAWAMPVMGGVVGGVVGVAAGLGTTAMEARGVATNLGTTTAMEVRGVAAG
LGTAASEARGLAVGLVTPAVEAKGIAASLVTGAATAVEVKASQYLRQPKIKHMDDMVTPM
LVACRLEKVREKEVREREQRERERDILLIEPAPVMPVMAEVVLQEMGREGMGRERLNSEP
SSRDHRAGSSRSEPQQRDRDRDTRLERQHSSEVLMIQARRDELPQEVWRERAERKERKLE
RQTSSEQEGHGHEGRRKDRHRTERQESSEHDTAKEQSDRRSTSGGQTLFDIVEQLKDREA
ATARGEVPKVPNGVPEKSSGRPDRPRARDRPKPRRRPRPKDHSAGEATTRRSRSAPEPGM
AQSVSPSVLQPPSHTAHHEGFLFRKLDIETMKKSSNSRSWVNLYCVLNKGEIGFYKDAKN
TATPYNNEPMLNLGHCHCDVTLGYKKKKNVFTLKTKDGSEFLFHAKDEDDLKAWTTNINK
SIAEHEEIAKWGQPQPTTSSTDEGTRRDGSKADNKSERGEKSDRGERPERAERSERSDKG
ETKSDTKRSEKSSKKKLV
NT seq
8157 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgcctccacagacctggacaacgcggaggcccaacgccagctcaacaacaac
aacacccgtctggccggcagctcgggacactgggaaactgaggtcaccagctccaagctg
tttgagtgttcccgcatcaaggccttggcagaagagagagatgctgtccagaagaagacc
ttcactaagtgggtgaactcccacctggcaagagtgtcctgtcgaatcgctgacctctat
aacgacctccgggacggctacatgctcaccaggctgctggaggtcctgtctggggagatg
ctgccgaggcccacgcggggtcgcatgcgtatccactgcctggagaacgtggacaaggcc
ctgcagttcctcaaggagcagagggtccacctggagaacgtcggctctcacgacatcgtc
gacggcaaccaccgtctcacccttggcctcatctggaccgtcatccttcgcttccagatc
caggtgattaagattgagtgtgacgacaacagggagacgcggtcggcaaaggatgccctg
ctcctctggtgccagatgaaaactgctgggtactctgaggtccacatccagaacttcacc
acctgctggagagatggtctcgccttcaacgctctcattcaccgacacaggcctgatttg
attgaattccataagctgatccggtcaaatgccacacacaacctccagcaagccttcaac
atagctgagcagaacctggggctcaccaaactcctggaccctgaagatgtgaatacagag
aacccagatgagaagtcgataataacctatgttgtgtcctactaccattacttctccaag
atgaaagcccttcgagtagagggcaagagagtgggaaaggtgttggacaatgccattgag
ggtcagaagatgatcgatcgatatgaggctctggcctcggagctcctggagtggatcgag
aagaccataggcatcatcagcaaccagaagtttgccaactccttaacgggtgtccagcaa
cagcttcaagccttcaccacctactgcaccatcgagaagcccatcaagttccaggagaag
gggaacctggaagtgctcctctttactatccaaagcaagctcagagctaacaaccagaaa
ccatacgtgcctcatgaagggaaactcatctctgatatcaacaaggcgtgggagaggctg
gagaaggcggagcacgagagaggtgtggccctacgtcaggagctgattcgccaggagaag
ctggagctgctggcccagcggtttgaccacaagaccaccatgagacaggcgtggctcaac
gagaaccagcgcctcgtgtctcaggataactttggctacgacctgccagcggtggaggcc
gccatgaagaagcacgaggccattgaggcagacatctcgtcgtacgaggagcgcatcggg
gtggtggtggagctggctggggagatggagacggagggctactatgacatccggcgcatc
tcggcccgcaaggagaacatcctgggccagtggagcctgctgaaggagctggtggtgggg
aggaaggcccggttggagaagaacctggctctgcagaagaccttccaggacatggtatat
atgatcgactggatggaggacatgcaggtccagctcctgtccaaagacttcggcaagcat
ctgctggaggtggatgacctgctgcagaaacacagcctccaggaagctgacatcacagcg
caggcagagagggtgcagacccttaactcagccgctctcaaattcaccaccatcgaaggc
taccagccctgtgacccccaggtgatctgcaaccgggtcaaccatgtcagcacctgcctg
gaggagctcaagcagctggcggccaagcggcgctcggagctggaggagtctcagcacctc
tgggccttcttccaggaggtggaggagtccgaggcctggatccgcgagaagagctccatc
ctggccacccagacctgcggcaaggacctgagcagcgtgctgcggctgctccagaaacac
aagaccctggctggggagctgctggcccaccgctccctcctccaacagaccatgaagaag
ggcaagcagatcctgatggagaagagtttcggcacggggggcatccaggagcgcatcatg
gaggtgaaaggggagtggaagaggctggaggaccaggcggcgcagagactgggccacctg
caggaggcactccatttcttccagttcagcacagagacggacgacctgctggcctggctg
caggacgcctaccgcctagtttccagcgaggactttggccacgatgagtactccacccag
tcactgctcaagaagcaccggggtgtgtgcgaggccgtggacaagcaccggatgcacgtg
gtaactctgcgcaaacacatggtggcgctgccactgcattaccgggagctggacgaggtg
cagtcgaggatgggcgaggcggagcagctgtacaccgaggtggccgaggtggccgtcctg
aggcagcagtggctgcacgacgcgctggccgtctacctcatgttcagcgaggtcaacgcc
tgcgaggtgtggatcgacgagaaggagcagtggctcaacaagatggaggttccagagagg
ctggaggacgtagaggtcatagcccacaggtttgagagcctggaccaggagatgaacagc
ctgatgggaaggatcctggacgtgaaccagatagtgcagcagctcctggacagtggtcac
cccagctcgacagaggtcagaggctgtcaggaccacctcaacagcagatggaaccgcatc
gtggagatggtggagcagaaaaaggatcacctggactctgtcctccgtctccagaactac
ctgctggagtgtgctgagatcaagtctcagatccaggagaagcgcaaggccatcgacgcc
actcagtacgtgggcagtgacctgggcggggtgctggccctgcagcgccgactctccacc
atggagggggccctggccgtgctggagccaaagctgcttcacctgcagcaggaggcagag
gagctggccatctcgcacccggccaaggccatggaggtcctggagcactttgagggcatc
agtgtggagtgggaggagctgaagcgcacgctgcagggctgcgaggactctctgatggtg
gcggggcggctgcagcagttcatccaggacctggactccttcctgacgtggctggtgcac
acacagacggcggcagctagcgacgagctgcccaacgcgctggaggaggccgagaggctg
atcaaccgccacgcggcgctgaaggaggagatcgggaggtacgaagaggactacgagcgg
ctacaggcggtcaacgagctgctggaggccgaggaggctccgctgccatacgcggcgctg
cagcagtggctccagaagctggatgtgggctggaacaagctgctggagatgtgggagagc
cggagggaggtgctggtgcaggcgcacatcttccacctcttcctgagggacgtcaagcag
gccgaggccttcctcaacaaccaggagtcagccttggcccacgttgagctccccgccacg
gtggagacggtggaggctgccatcaagaagcacaaggacttcaccaccaccatggagctc
aacctgcatcgcatcaaggctgtcatcgaggccggagagagcctcattagccagagcaac
atctactcggaccgtatcagggagcgtgtggacaccctcgccaacagaggcaaccagaac
cgggaattggcccaacagtggctggagaggctcaacggccagtgggggctccagaggtta
ctacaggactgccacgagcttggagactgggtggcagagaagatgctcatggctcgtgac
acgtcccgcgatgagacgcagaagctgcacaagaagtggctgaagcaccaggccttcatg
gccgagctgtcccagaacaaggagtggctggagaagatcgagagggagggccagcagttg
atccaggagaagcccgagctgagcccggtggtacggcggaagctgggggagatccgggag
tgttggcaggacctggagagcaccacccaggccaaggcccgccagctgtttgaagccaac
cgggccgacctgctggtgcagagctacgtcagcctggaccatcggctgcaccagctggag
ggacaactgtgctacgtggaccagggtcaggacctgaccagcgtcaacaagcagctcaag
aagctccagacgatggagtgtcagatggaggagtggtataaggaggtgggggagctgcag
gtggcggcggcctccatcccccagcagggccaggtcatggagacggtcggtgagcgccag
gccgccgtggagacgcgcatcgtccgccttatcgagccgctcaaggagcgacggcgcatc
cttctggcctccaaggaggttcaccaagtgggccgggacctggaggacgagatactgtgg
gtgcaggagcggctgcctgccgccacgtctcaggagcacggctccagtctccaggctgtg
cagcagctcatgaagaagaaccagactctgcagagggagctgcagggccatcgggcgagg
gtggaggacgtcctggaacgagctaatgtcatcgcctccatccgcagccccgaggctgac
tgtgtgcgggcgggcctggagcagctcagcgggctgtggggtctgctgtgggccgagaca
gagagaagacagctggtgctggatgccatgtaccaggcccagcagtactactttgacacg
gccgaggtggaggcctggctcagcgaacaggagctgcacatgatgaacgaggaaaagggc
aaggatgagcccagcaccctgcagctactgaagaagcacctggtactggagcagacgata
gaggactacgctgagacgataggccttctctcccagcagtgcagacagctactggagatg
ggacatccagacagtgagcagatcagtaagtgtcagtctcagatggaccggctgtacgtg
tctctgaaggacctggtggaggagaggaagtctcgtctggagcagcagtactggctctac
cagctcaaccatgaggtggatgagctggagcagtggatcgctgagagggaggtggtggcc
agctcgccagaactgggacaggactttgaacacgtcacgatcctgcaggagaagttcaca
gagtttgcgtcggagacgggcagtctgggtcaggagcgtgtgacggcggttaaccagatg
gtggatgagctgatcgactacggccacgccgaggccgccaccatcgccgagtggaaggac
ggcgtgaacgaggcctgggccgacctcctggagctcatggagacccgggcacagatgctg
gccgcctcgcaccagctccacaagttcttcaccgactgccgcgagatcttggcccaaatc
gatgataagcagcggaggctgcccgaggtgcgggcgcgccagggtggcactgccaacacc
agcaccctgcagaggctcatgcacagcttcgagcacgacatccagctgctcgtcactcag
gtgaggcagctccaggagagtgcgggtcagctccggaccatctacgccgggcagaaggct
gaggcgattgccggccgggaacaggaagtgatgcattgctggaaggagctcttgacgtcc
tgtgaggagtgccgagtgcagatcaccacggcaacagacaagctgcggttcttcggggtg
gtgcgagaccagatcatgtggatggacagcatcatctctcagatcggaacaggggacaat
ccaagggatgtgtcctcagtggaggtactgatgaactaccaccagagcttgaagagcgag
gtggagacgcgcagtaagagtgtgctgcagtgcatcgagatgggcaagatgctgctggcc
gcacgcaaccctgctgctgaggagatcaaggagaagctggataaggtggtggccaagcag
tacgagctgtctgagaaatgggacaaacactgggaggtcctgcagcacatgctggaggtg
caccagtttgcccaggaagcggtggtggccgaggcctggctcacggcccaggagcccttc
atcaatagcaaggagctgggtgccagtgtggacgaggtggagcagctcatccgccgccac
gaggccttccgcaaggccgccgccacgtgggaggagcgcttcagctcactacgacgcctc
accacggtggagaagatgaaagcggagcagagtaagctccctcccacccccctgctgggt
cgaaaggtgttcctggacccccaggagacgtcccctgcccggagccagggctcccccctg
atgagacggatcatttacgagcaggccgagcacagagctgaaaggccctcccaggaaccc
ttgccctcctccgtggcccgccgcttgggatccaccgtggccaactacacccccatcatg
aacggctccagtggctaccgcaacagcctggaggcctgggccatgcccgtgatgggggga
gtggttggaggtgtagtgggggtggcagctggcctgggaacaaccgccatggaggccaga
ggggtagcaacaaatttagggaccacaactgccatggaggtccgaggggtggcagcaggg
ttggggactgccgcctcggaagccagagggttggccgtaggattggtcacccccgcggtc
gaggccaaagggatagctgcaagcttggtgactggtgcagccacggcagtggaggtgaaa
gcctcacagtacctccggcagcctaagatcaaacacatggacgacatggtgacccccatg
ctggtggcctgtaggctggagaaggtgagagagaaggaggtgagagagagggagcagaga
gagagggagagagatattttgttaatagagccagcgccggtgatgccggtgatggccgag
gtggtgctccaggagatggggagggaggggatgggcagggagaggttgaacagtgagccc
agcagcagagaccaccgggcggggagcagccggtcagagccccagcagagagacagggat
agagacaccaggctggagcgccagcactctagtgaggtgctgatgattcaggcacggcgg
gatgagctgccccaggaggtgtggcgggaacgggccgagcgcaaagagaggaagctggag
aggcagacgtccagtgagcaggaaggccacggacacgaaggccggaggaaagatcgccac
cggacggagagacaagagtccagtgaacacgacacagccaaggagcagtcagacagacgt
tctacgtcaggcggccagaccttgtttgacatagtggagcagctaaaagacagagaggca
gcaacggcccgaggggaggtccctaaagtgccgaacggcgtgccagagaagtcttccgga
cgtccagaccggccgcgagcacgggaccgccccaagccccggcggagacccaggcccaag
gaccactctgcaggagaggccaccacccggcggtcacgctcggcgccagagccagggatg
gcccagagcgtgagcccctcagtcctccagccgcccagccacactgcccaccacgagggc
ttcctcttccgcaagctggacatcgagaccatgaagaagagctctaacagcagatcctgg
gtcaacctgtactgtgtgctgaacaaaggagagataggcttctataaggatgctaagaac
accgccacaccttacaacaacgagcccatgctcaacctcggccactgccactgcgacgtc
acccttggatacaagaagaagaaaaacgtctttacacttaaaacgaaagacggaagtgaa
tttctgttccatgcaaaggatgaggatgatctaaaggcctggaccaccaacatcaacaag
agcatcgcagagcatgaggagattgccaaatggggtcagccccagcctactacctcatcc
acggacgagggcacgcgccgggacggcagcaaggccgataacaagtcagagcggggagaa
aagtcagaccggggggaaaggccggagagggccgagcgctctgagaggtcggataagggt
gagaccaaatcggacaccaagcgttcagaaaagtccagcaagaagaaattagtttga
DBGET
integrated database retrieval system
