KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139382579
Entry
139382579         CDS       T10872                                 
Name
(RefSeq) bifunctional polynucleotide phosphatase/kinase isoform X1
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    139382579
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ocla01009]
    139382579
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ocla03400]
    139382579
Enzymes [BR:ocla01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     139382579
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     139382579
Protein phosphatases and associated proteins [BR:ocla01009]
 HAD phosphatases
  Other HAD phosphatases
   139382579
DNA repair and recombination proteins [BR:ocla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     139382579
SSDB
Motif
Pfam: PNK3P FHA_2 AAA_33 Hydrolase_6
Other DBs
NCBI-GeneID: 139382579
NCBI-ProteinID: XP_070982800
LinkDB
Position
24:complement(10969334..10976699)
AA seq 619 aa
MDTLRYLFFPTSYCLLSLQMQQCTLVSASGARVPLADGRAVILGRGPETGVIDKKCSRHQ
VKLVACYADKEVLVTQLGPNPSSLGSESLGRGQSGRLTHDSTLYLVNQSHPFRVQFSASN
ETSSSSAQKGKVVERLKALDKTKGGKNDRGREVQSTVPKRSIQDFFASSPKKASKRPHSS
EEPLQEKRRRTTGSDSGGEDEAEKLVEEKLRQLQEMSESASGASRDCVQQQASVSACSRS
HWQQIGNLMIYTAVGVTGSTKIAGFDIDGCIITTNSGKVFPTSPDDWRILFPEIQPKLAS
LLKKGYKVVFFTNQMGISRGKLKPEDFKSKVETILKTLQLPVQVFVASGPGIYRKPVMGM
WEHLCEKGNGGVAVDKSQSLYVGDAAGRPVNWAPGKKKKDFSCSDRLFALNLGLQFHTPE
EFFLGWKTAPFSLPPFDPRKCDSNACLYDPPSASLTSTKQEVIIAVGFPASGKSTFFHTH
IVPKGYVYVNRDTLGSWQSCVSACERALKEGRSVAVDNTNPDLESRKRYVDVSQSLGVSC
RCFNFSASLEQAKHNNRFREMAPSTTKHLKVNDMIFHSYKKKFVAPSLSEGFSEILQIHF
VPTFTDSQSEALFRQFSEG
NT seq 1860 nt   +upstreamnt  +downstreamnt
atggacaccttacgttatttgtttttccctacatcctactgtctcttgtctttgcagatg
cagcagtgcacattagtcagtgcatccggcgctcgtgtcccactagccgatggccgagcc
gtgatcctaggtcgtggtccagagactggagttattgacaagaagtgctcccgacaccag
gtgaagctggtggcctgttatgcagacaaggaggtacttgtaacacagcttggccccaac
ccctcatccttgggcagtgagagtcttggtagaggccagtctggccgactgacccatgac
agcaccctctacctggttaaccagagccaccccttcagagtgcagttctctgcttccaac
gaaacctcctcatcctctgcccagaaggggaaggttgtagaaaggttgaaagcattggat
aagacaaaaggaggaaagaacgacagagggagggaggttcaaagcacagttcccaaacgc
agcatccaagacttttttgcttcctctcccaagaaggcatccaagaggccacacagttct
gaggagcccctgcaggagaagcgtaggaggactacaggctccgacagtgggggcgaggac
gaggctgagaagcttgttgaggagaagctccgacagctccaggagatgtcagagagtgct
tcaggggctagcagagactgtgtccagcagcaggcatcagtctcagcctgttctcgaagc
cactggcagcagattggaaacctcatgatctacactgctgttggcgtcactggaagcacc
aagattgctggattcgacattgacgggtgtatcatcaccaccaattctggcaaagtgttt
cccaccagcccagatgactggaggattctctttcccgagatccaacccaaactggccagt
ttattaaagaaaggctacaaggttgtgtttttcaccaatcagatgggtatatctaggggg
aaactgaagcctgaggatttcaagtctaaagtggagaccattctgaagacattacagctc
cccgtacaggtctttgtggcgtctggtcctgggatctacaggaagccagtgatggggatg
tgggagcacctgtgcgagaagggtaatggcggcgtggctgtagacaaaagccagagtctc
tatgtgggagatgcagcgggacggcctgttaactgggctcctggcaagaagaagaaggac
ttctcctgcagtgaccgactgtttgctctgaaccttggactgcagttccacactccagag
gagttcttcctgggctggaagaccgcccccttcagtcttcctccatttgaccctaggaaa
tgtgactctaacgcctgtctatatgacccgcccagtgcctccctcacctccaccaagcag
gaagtaatcattgccgtgggtttccctgcttctgggaaatcaacctttttccacacacac
atcgtccccaaaggttacgtgtacgtgaaccgggataccctgggctcttggcagagctgt
gtttcggcctgtgagcgggcactgaaggaggggcgcagcgtggcggtggataacaccaac
ccagaccttgagtctcgcaaacggtatgttgacgtcagccagagtttgggcgtgtcctgt
cggtgcttcaacttctctgcctccctggagcaggccaagcacaacaacagattccgtgag
atggccccctccaccaccaagcacctcaaagtcaatgacatgatcttccacagttacaag
aagaagtttgtggcgcccagtctctcggaaggcttttcagaaatcctgcaaattcatttt
gtcccaacctttacagacagccaatcagaggccctcttcaggcagttctctgaaggctga

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