Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139382607
Help
Entry
139382607 CDS
T10872
Name
(RefSeq) solute carrier family 23 member 1-like isoform X1
KO
K14611
solute carrier family 23 (nucleobase transporter), member 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
139382607
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocla02000
]
139382607
Transporters [BR:
ocla02000
]
Solute carrier family (SLC)
SLC23: Na+-dependent ascorbic acid transporter
139382607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xan_ur_permease
Motif
Other DBs
NCBI-GeneID:
139382607
NCBI-ProteinID:
XP_070982818
LinkDB
All DBs
Position
2:complement(78373705..78385514)
Genome browser
AA seq
615 aa
AA seq
DB search
MAPEKESNGLENYAFAIDGRFCDLEKDEEGSDLSEEDDKNKLAYCVTDIPPWYLCIILGI
QHCLTAFGGIIAIPLILSQGLCLQHDSLTQGHLISTIFFVSGVCTLLQVTFGIRLPILQG
GTFTLLAPSMAMLSMPEWTCPAWTQNASLVNATSPEYVEVWQSRMRALQGSIMVGSLFQV
LVGFSGLIGLFMRFIGPLTIAPTISLIGLSLYDSAGMNAGNHWGISTMTTALIILFSQYL
RHIPVPFPTYSKTKKLHTTKIYIFQILPVLLGITLSWLICYIFTISDVLPSQPGQYGYLA
RTDLKGDVIVQAPWFRFPYPGQWGLPTVSLAGVVGILAGVISSMIESVGDYHACARLSGA
PPPPKHAINRGIGIEGLGCLLAGAWGTGNGTTSYSENVGALGITKVGSRMVIIAGGVLLI
IMGLFGKIGAIFTTIPTPVVGGMFLVMFGVISAAGVSNLQYADMNSSRNIFIFGFSMFSG
LVIPNWIFKNPDAIATGVVELDQLLQVLLTTSMFVGGFFGFFLDNTIPGTKRERGIIAWN
KIHLDDSSNTLESSEVYNLPFGISSCLSSYTWVRYVPFLPLNAPSSQDKPGVDSLEAKKQ
PGKPEPSHIIRSVAL
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggctccagaaaaggaaagcaatggtctcgaaaactacgcatttgctattgatgggcgt
ttctgtgatctggagaaggatgaggagggctccgacctctctgaggaggacgacaagaac
aaactggcctactgtgtcacagacatcccaccctggtacctttgcatcattctgggcatt
cagcattgcctgacagcgtttggagggatcatcgccatccctctgatcctgtctcagggt
ctgtgtctgcagcatgacagcctgacccagggtcaccttatcagcaccatcttctttgtg
tcaggcgtgtgcaccctgctgcaggtcacctttggaatcagactgcccattctacagggg
ggtactttcaccttgctggctccctcaatggccatgctgtcgatgccagagtggacatgc
cctgcctggacccagaacgcttccttggtcaatgccacctctcctgagtatgtagaggtg
tggcagagccgcatgcgagcgctacagggctccatcatggtgggctccttgttccaggtc
ctggtgggtttctctggcctcatcggtctcttcatgcgtttcattggccccctcaccatc
gcacccaccatctctctgattggcctgtccctatacgactcagctggaatgaatgcaggg
aaccactggggcatctcaactatgacgactgctctgatcatcctgttctcccagtacctc
cgacacatccctgtaccatttccaacatacagcaagaccaagaaactccacaccaccaag
atctacatcttccagattctaccagtgctccttggcatcacactgtcatggctgatctgc
tacatcttcaccatctctgacgtcctgccctcacagccggggcaatatggctacctggct
cgcacagacctgaaaggggatgtcatagtccaggccccctggttcagattcccataccca
ggtcagtggggcttaccaacagtgagcctggcaggagtggtagggatcttggctggggtg
atatcctccatgatagagtcggtgggggactaccacgcctgtgccaggctgtcaggggcc
cctcctcccccaaaacatgccatcaacaggggcattggcatcgaggggcttggctgtctg
ctggctggggcctggggcacaggcaacggaactacctcctacagtgagaatgtgggagca
ttggggatcaccaaggtgggcagtcgaatggtgatcattgctggtggcgtcttgctgatc
atcatgggactgtttggtaaaattggagccattttcaccaccatccccacacctgtggtt
ggaggaatgttcttggtcatgtttggggtcatatctgcagctggagtttcaaatctgcag
tatgcagacatgaactcctcccggaacatctttatctttgggttttccatgttttccgga
ctggtcattccaaactggatattcaagaacccagatgccatagcaacaggtgtggtcgag
ctggaccaactgctgcaggtgcttctgacaaccagcatgtttgttggaggcttctttggg
ttcttccttgataacaccattcctggaaccaagcgagagcgaggcatcatagcctggaac
aagatccacctggacgactccagcaacaccttggagagtagcgaggtgtacaaccttcca
tttggaatcagctcttgcctctcctcctacacctgggttcgatatgtgccgttcctccct
ctgaatgcacccagctcacaggacaagcccggggtggactctttggaggccaagaagcaa
cctgggaagccagagccctcacatatcatcagatcagtggccctatga
DBGET
integrated database retrieval system
