Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139382639
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Entry
139382639 CDS
T10872
Name
(RefSeq) short transient receptor potential channel 2
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139382639
Ion channels [BR:
ocla04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
139382639
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
Motif
Other DBs
NCBI-GeneID:
139382639
NCBI-ProteinID:
XP_070982835
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Position
24:33143168..33148250
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AA seq
816 aa
AA seq
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MDNITPDQWQAIVNKKLNFPPELIAAIQEDNAILVGSLLSTGDGIIRQLDESEDRLWREA
LNLSIRMGNEDTFSALMLGVKFDFRQIYEALLVAVDTNQPRVVKRLLDRLDQEKGNKMDV
RSFSMAIFDHSIDDSQFAPGVTPLTLACQKDLYDIVTMLTKKGHAIPLPHSVSCTCLECR
NGRQYDLLKFSLSRINTYRGMASRAYLSITTEDAMLSAFRLSRELRKLSKKEPEFKPQYL
SLEELCQEFAVEMLAMCRNQSEVTTVLNICDDDNEDELDEQTFEEGIPTLSRLRLAVNYN
QKLFVSHPICQQVLSSIWCGNIPGWRGSKTVWKLTVSLGIFFTMPLLCMIYWVAPKSKIG
KTLKIPVIKFLLHSASYLWFIIALLAESIFMELYRDEFASRQQNILYNSLHMIWVVGFFW
SECKNVWAEGLRGHIVDWSNILDMIVLSMYLASFGLRVLIMAIGHFVCQDQNLVEKCAYF
TQTVRDEWWQEDPQLISEILFAVTSMLSFTRLAYILPAHESLGTLQISIGIMIDDMMRFM
FLLMIIGTAFLCGLNNIYVPYATSPHLGRFNETFSFLFWTMFGASNQGYVDMPDFVLAQF
VGRVLYGIFTLVIVIILLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGSTVPV
PFNLVPSPKALFYLLRGFFCCCNRKKIPDYPPIASMSNSTMNNSGEAGMDQVSYRLQVVK
ALVQRYIEAARREFGEATRKDVGNRITELNKGVGRLHSDMKTFYQNLQNSKSFGSKGDGG
NFLGKYIKGAKNNFKNFDKNEAMGNSPDVYESICTS
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggacaatattacgccagaccaatggcaggcgattgtgaacaaaaagcttaatttcccc
ccggagctgatagcagccattcaggaagacaacgcaattctggtgggcagcctgctgtcc
acaggggatggcatcatccgccagctggatgagtctgaggaccgtctgtggagagaagcc
ctgaacctgtccatccgcatgggcaatgaggacactttctccgctctgatgctgggcgtc
aagtttgactttaggcagatctacgaggcgctgctggtggcggtggacaccaaccagccc
cgggtggtcaagaggctcctggaccgcctggaccaggaaaagggcaacaagatggatgtg
cgctcattctccatggccatatttgaccactccattgatgactcccagtttgcccccgga
gtgaccccgctgaccctggcctgtcagaaggacctgtatgacattgtcaccatgttgact
aagaagggtcatgccatccctctgcctcactctgtctcctgtacctgtctggagtgcagg
aacggccgtcagtatgacctgctgaagttctctctgtctcgtatcaacacctaccggggc
atggccagccgggcatacctctccatcaccacagaggatgccatgctcagtgccttcaga
ctcagccgggagctacgcaagctctccaagaaagaacctgaatttaagccccagtacctg
agcctggaagagctgtgtcaggagttcgcagtggagatgctggccatgtgtcgcaaccag
agtgaggtcacaacggtcctgaacatctgtgatgacgataatgaagatgaactggacgag
cagacctttgaggaggggattccaaccctgtcacgcctacgccttgcagtcaattacaat
caaaaactgtttgtgagtcatcccatctgccagcaagtgctgtcgtccatttggtgtgga
aacatcccagggtggcggggcagcaagacggtctggaaactcactgtgtctcttgggatc
ttcttcaccatgcctctcctctgtatgatctactgggttgctcccaagtccaagattgga
aagactttgaagatacctgtgatcaaattcctgctgcactctgcctcctacctgtggttc
atcatcgcccttctagctgagtctattttcatggagctgtaccgcgatgagttcgcatcc
cggcagcaaaacatcctctacaactccctccatatgatctgggtggtcggtttcttctgg
agtgagtgtaagaatgtgtgggcggagggtctgaggggtcacatcgtggactggtccaac
attctggacatgatagtactcagcatgtacttggcttccttcggtctgagagtcctcatc
atggcaattggtcattttgtttgccaagaccaaaacttggttgagaagtgtgcctacttc
acccaaacagtgcgggatgaatggtggcaggaggaccctcagctgatctcagagattctg
ttcgctgtgaccagcatgctcagcttcacccgactggcctacatcctgcctgcccatgag
tctctgggtactctacagatctccattggtataatgatagatgacatgatgaggttcatg
tttctcttgatgatcattggaacagcttttctctgtggactgaataatatctatgtgccc
tacgcaacttctccacatcttggacgcttcaatgaaaccttcagctttctcttctggacc
atgtttggtgcatctaatcaaggctatgtggacatgccagattttgtcctggctcagttt
gtgggcagggtcctgtatgggatcttcactctcgtcattgtcattatcctgctcaatatg
cttatcgccatgatcactaattcattccagaagatagaggatgatgctgatgttgaatgg
aagtttgctcgttcaaagctctacttgagttacttcagagagggctccactgtacctgta
cccttcaacctcgtcccctctccaaaggccttgttctacttactgaggggctttttctgt
tgctgcaaccgaaagaaaattccagactatcctcctattgcctctatgtccaacagtaca
atgaacaacagtggagaggcagggatggaccaagtgtcatatcgcctgcaggtggtcaag
gcgctggtacagcgctacatagaagcagcccgcagggagtttggagaggcgacacgtaaa
gatgtggggaacaggatcacagagctgaacaagggggtggggagacttcactctgatatg
aagacgttctatcagaacctgcagaacagcaagtcctttggctcaaagggcgatggaggc
aacttcctgggcaagtacataaaaggagcaaagaacaactttaagaactttgataaaaat
gaggcaatggggaatagcccagacgtgtacgagtcaatctgcacctcgtag
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