Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139382708
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Entry
139382708 CDS
T10872
Name
(RefSeq) ribosome maturation protein SBDS-like
KO
K14574
ribosome maturation protein SDO1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
139382708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ocla03009
]
139382708
Ribosome biogenesis [BR:
ocla03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
139382708
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
PriA_C
Motif
Other DBs
NCBI-GeneID:
139382708
NCBI-ProteinID:
XP_070982913
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Position
24:complement(18327591..18330280)
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AA seq
250 aa
AA seq
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MSIFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWRSGAEKDLDEVLQTSSVFNNV
SKGQVAKKDDLSKAFGTDDLTEICKEILAKGELQVSDKERQSQLETSFRDIATIVAEKCV
NPETKRPYTVNLIERAMKDIHYSVKANKSTKQQALEVIRQLKDSIEIQRAHMRLRLVLPA
KEGKRLKEKLKPLLKVVESEDFDDQLEMVCLVDPGCFREIDELIRCETKGKGSLEVLSLK
DVEEGDERLE
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgtctatatttacaccaacaaaccagatccgactcacaaatgtggcggtggtgaggatg
aaaaagggaggaaaacgatttgaaatcgcctgctacaaaaataaagtgatgagctggaga
tctggagcagagaaggacctggatgaagtgttgcagaccagttctgttttcaataatgtt
tccaagggtcaggttgccaagaaagatgatctgtcaaaagcctttggaacagatgacctg
acagagatatgcaaagaaattttagctaaaggagaactccaggtttcagataaggagagg
cagagccagttagagacgagtttcagagacattgcaaccatcgtggcggagaagtgtgtg
aacccagagaccaagcgaccatacactgtcaacctcatagagcgggccatgaaggatatc
cactactctgtcaaggccaacaagagcaccaagcagcaggctctggaggtgatcaggcag
ctgaaggattccatagagatccagagggcccacatgaggctgaggctggtgctgccggcc
aaggagggcaagaggctgaaggagaaactcaaacccctcctcaaggtggtggaaagtgaa
gactttgacgaccagctagagatggtatgtctggtggacccaggctgcttcagggagata
gatgagttgatccgctgtgagacgaaaggtaaaggttccctggaggtgctcagtctgaag
gatgtggaagagggagacgagaggctggaataa
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