Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139382775
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Entry
139382775 CDS
T10872
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139382775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139382775
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
139382775
Endosome - Golgi transport
Arf GTPase associated proteins
139382775
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
139382775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH
RhoGAP
ArfGap
RA
PH_11
PH_6
PH_8
SOS1_NGEF_PH
PH_13
PH_9
Motif
Other DBs
NCBI-GeneID:
139382775
NCBI-ProteinID:
XP_070983022
LinkDB
All DBs
Position
24:35238705..35315897
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AA seq
1197 aa
AA seq
DB search
MADRDVFLPVPGWGKGRYSSLCSDDELLDDDNEPISNRQSSWQDYGLSTLQESVYLPVTG
RVLAQPPRDGPSPVLKMGWLDKNPPQGSLYYQRRWVKLDVDYLRYFDNDKEVYSKRIIPT
AAITGVTNVGEQKFEVVTTNRTFLFRAESDFERNEWVSVLQNFTRGHQEGSREITSSVPH
SSMTPGSPLTPEKHGYLELRGLRSKLYTVVSGDKVFLYKNMEDYRLGIGITSIDMNVGNV
KDTDRRSFDLTTPYRIFSFLADSEQHKDQWVEAMREAIGEALSNSEVANQIWAEPSNGCC
ADCGAAKPEWAAINLCVVVCKRCAGEHRGLGPSISKVRSLKMDRRVWTEELIQVFLLLGN
ERLNRFWAANVPPSEALSPTSCSEDRRRFVSSKYRQGKYRKYHPLYGNQEELNNALCINV
QCSDVLETLCLVFCGADVNCSTGQADCPSPLALALAHNQKLQAQFLSHNLNTELPRSEVT
GAMEPQHYSPQHPVTHNGFLFKTASMARPITERKAREEFSRRWCMLNDGNFSYYESDKNS
TPNGTLKSTEIVCLAVNTPERHGYDHTFELYSDSERIYLFGTDDPDSHREWVKSITKTFI
PSNAEGLLRLAFERIGRLRYKDGLNLQSPRVGWFALVGSSLHAYLEDSVEEEEIHLRKLQ
ELSIQQENEVLVLVERGRTLYIEGEKKLDFQGWCVSVQRAAGSAGDSLSQQQLTETDIPV
IVDRCIDYITQCGLTSEGIYRKSGVNSRVAALCEAFRRDARSVRLKEGEHQVDDVSNTLK
RFFRESGEGLFAIQAASAWLSTPVIPEESRKICHYQLLLSQLPRVNKATLRALVNHLYCV
QRFAELNQMNLHNLAIVFGPTLFQSDGKDYTAGLVVEELIEHYTDVFEVDEMQLKRQLDE
ITAIIKVREKLNHNSSVPASGSAGDFICTVYLEEKKETTEQHVKIPGSMTAAELTCEILD
RRKIQVREKDYWSCWEVSQKEEMERPLHHLERVLPIIHSLGTDSHLLVKKHLAMEAIRIY
LASKVDVSKHGMVKFREERSILGLGLNTGSFHDRYFILSTVSLRMYKEVRSNRPEREWQV
KNLRVYLGIKKKLRPPTCWGLTVINGSEKQEKPERQQWYLCCDTQTEMREWFSTFLTIQC
DGNVWPADAVQTRVTRALPADTRHGNVALIPLRGSENEMRNSVAAFTADPLGLFRDV
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagggatgtgttcctgccggtgccggggtgggggaaggggcggtacagctct
ctctgcagcgacgatgaactattggacgatgacaacgagccaatcagcaaccgtcagagc
tcatggcaggactatggtctgagtacgctacaggagagtgtctacctgccggtcacaggc
agggtcctagcccagccccctagagatggcccctcccctgttctaaagatgggctggctg
gataagaacccaccgcaggggtctctgtactaccagaggagatgggtgaagctggatgtt
gactacctgagatactttgacaacgacaaggaggtatactctaagaggatcataccaacg
gctgccattacgggggtgaccaacgtgggggagcagaaatttgaggtggtcacaaccaac
cggacctttctcttcagggccgagagcgactttgagaggaatgagtgggtgtcagttctg
cagaacttcactagggggcaccaggagggcagcagggagattacttcatcggtcccacac
tcctcgatgacccctggttcacccctgacccctgaaaagcatggctacctggagctgagg
ggcctgcgctccaaactctacacagtcgtctccggagacaaggtcttcctctacaagaac
atggaggactaccgtcttggcatcggcatcacgtctatcgacatgaacgtaggaaacgtg
aaagacactgaccgccgcagctttgatctgacaacaccctaccgcatcttcagttttcta
gcggattcagaacaacataaagaccagtgggtagaagcgatgcgtgaagcgattggagag
gctctgtccaatagcgaggtggctaatcaaatctgggcggagcctagcaatggttgctgt
gccgactgtggcgccgccaaacctgagtgggctgccatcaacctgtgtgtggtggtctgc
aaacgctgtgcaggagagcaccgcggtttgggccccagcatctctaaggtgcgcagtctg
aagatggacaggagggtgtggacagaggagcttatacaggtgttcctgttgctaggtaat
gagcgtctgaacagattttgggcggcgaacgtccctcccagcgaggcgctgagtccgacc
agctgcagcgaagaccgccgacgattcgtcagctccaaatacagacagggcaaataccgc
aaataccaccccctctacggcaaccaggaagagcttaacaacgccctgtgtataaacgtg
cagtgcagtgatgtcctggagaccttatgtctggtgttctgtggagctgatgtgaactgt
tctactggccaggctgactgtccctcccccctcgccctggcactcgcccacaaccagaaa
ctacaggcccagttcctctcacacaacctcaacacagagctgcctcggtcggaggtgacc
ggggccatggagcctcaacactattcaccacagcaccccgtcactcacaatggcttcctt
ttcaagaccgcctccatggcccggcctatcacggagcgtaaggccagggaggagttcagt
cgtcgctggtgtatgttaaatgatgggaactttagttactatgagagtgacaagaactcc
acgcccaacggaaccctgaagtctacagagatagtctgtctggctgtcaacacaccagag
agacatggctatgaccatacatttgagctgtactcagactctgagcgtatctatctcttt
ggcactgatgacccagacagccacagggagtgggttaaatctatcaccaagacgtttatt
ccatccaatgcagagggcctgttgaggctggcttttgaaaggattggccggctgcggtat
aaagacgggctgaatctacagagccctcgggttggctggttcgctctggtcggctcctcc
ctccatgcctacctagaggacagtgtggaagaggaggagatacacctacgcaaactacag
gagctctcgatccagcaggagaatgaggtgctggttctggtggagagaggcaggactctg
tacattgagggggagaagaagcttgacttccagggttggtgtgtgtccgtgcagagagca
gcaggcagtgcaggagactctcttagtcaacagcaactaactgagaccgacatccctgtt
atagtggaccgctgcattgactacatcacacagtgtggtctgacgtccgagggtatctac
cgtaagagcggtgtgaacagtcgcgtggcggcgctgtgcgaggcgtttcggcgtgatgcc
cgtagcgtgcgtctgaaggagggtgagcaccaggtggacgacgtgtctaacacactgaaa
cgcttcttcagagagtctggagagggcctgttcgccatacaggctgctagcgcatggctc
agcacacctgtgatcccagaggagagcagaaagatctgtcactaccagctgctgctgagc
cagctgcccagagtcaacaaggccacgctacgagccctggtcaaccacctctactgtgtg
cagcggtttgcagagctgaaccagatgaatctccataacctggctatagtatttggccca
acactgttccagagcgacgggaaggactacaccgctggcctcgtcgtagaggaactcata
gagcactacacggacgtctttgaggtggatgagatgcagctgaaaagacagctggatgag
atcacggccatcattaaagtccgagagaagttgaaccacaactccagcgtccctgcgtcg
gggtcagcaggtgacttcatctgtacagtgtacctggaggagaagaaggagacgacagag
cagcatgtcaagatccctggttctatgacggcagcagagctgacctgtgagattctggac
cggcggaagatccaggtcagagagaaagactactggagctgctgggaggtcagccagaag
gaggagatggagcgtccattgcatcatctggagcgtgtgttacccatcatccattctctg
ggtaccgactcccacttgctggtcaaaaaacatctcgccatggaggccatacgcatctac
ctggccagtaaagtggatgtgtccaagcacgggatggtgaagttccgggaggagaggagc
attctgggattgggactgaataccggcagcttccacgaccgctacttcatcctgagcact
gtctccctcaggatgtacaaggaagtgcggagtaatcgtccagagagggaatggcaggtg
aagaacctgagggtctatctaggcatcaagaagaaactacgaccacccacctgttggggt
ctgactgtgatcaatggaagtgaaaaacaggagaagccagagaggcagcaatggtatctg
tgttgtgacactcagacagagatgagggagtggttctccaccttcctcactatccagtgt
gatggtaacgtgtggccagcggatgcagtacaaacacgtgtgacccgtgcgttgccggcg
gatacgcgtcatggtaatgtggcgttgattccattgcgcggcagcgagaatgagatgcgg
aacagcgttgcagctttcaccgccgacccgcttggcctctttagagatgtctga
DBGET
integrated database retrieval system
