Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139382923
Help
Entry
139382923 CDS
T10872
Name
(RefSeq) RNA polymerase II-associated factor 1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocla03021
]
139382923
Transcription machinery [BR:
ocla03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
139382923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
139382923
NCBI-ProteinID:
XP_070983296
LinkDB
All DBs
Position
24:20673461..20678661
Genome browser
AA seq
531 aa
AA seq
DB search
MAPTIQTQAQRDSDGHRSSSHRTVPERSGVVCRVKYCNSLPDIPFDPKFITYPFDQHRFV
QYKATSLEKQHKHELLTEPDLGVTIDLINPDTYRVDPSILLDPADEKLLEEDITAPSSSK
RSQQHAKVVPWMRKTEYISTEFNRYGVSNEKVEVKIGVSVKQQFTEEEIYKDRDSQIAAI
EKTFEDAQKPIAQHYSKPRVTPVEVMPVFPDFKMWINPCAQVIFDSDPAPKDMSAPQGVE
MMSQAMIRGMMDEEGNQFVAYFLPNEETIRKRKRDVDEELDYMPDDLYDYKIAREYNWNV
KNKASKGYEENYFFIFRDGDGVYYNELETRVRLSKRRAKAGAQSTTNAVLVCKHRDMNDK
ELEAQDARKAQLENHEPEDEEEDMDLGKLQDSGDEKGSESEGDNSDSDSDREDEDGKRSG
AEDDEEGVKRRRKASGSGSESGEEEVKLADEVEIFGSDDDSDDDDNEPKNEAARSSGEEG
SGSEEKESHRERSRSVSPAHSSGSDHSEGGRAQSGSGSEQASDSSDGSDSE
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggctccaactatccagacacaagcacagcgagactcagacggtcacaggagttcatca
cacagaactgttccagagaggtctggagtggtctgtcgggtaaagtactgcaacagcctg
cctgacatcccatttgatcccaaattcatcacatatccatttgaccagcacaggtttgtg
cagtacaaggctacgtcgttagagaagcaacacaaacatgaactgcttactgagcctgac
cttggcgtcaccatcgacctcattaacccagacacataccgcgtcgaccccagcattctt
cttgatccagctgatgagaagttattggaggaagacatcacagctccatccagctcgaaa
agatctcagcagcacgccaaggtggtcccgtggatgagaaagactgagtacatctctaca
gagttcaacagatatggtgtctccaatgagaaagtggaagtcaagatcggtgtgtctgtc
aaacagcagttcacagaggaggagatatacaaggatagggacagccagattgctgcaatt
gaaaagacctttgaggatgcacagaaaccgattgcccagcactacagtaaacccagagtc
actcctgtggaggtgatgcctgtgttccctgacttcaagatgtggatcaacccgtgtgct
caggtaatcttcgactctgatcctgctcctaaagacatgtcagcaccccaaggtgtggag
atgatgtcacaggccatgattagaggtatgatggatgaggaaggaaaccagtttgtggcc
tacttcctgcccaatgaggaaacgattcgcaagcgcaagagagacgtggatgaggagctg
gactacatgcctgatgatctgtatgactataagatagccagggagtacaactggaatgtg
aagaacaaagccagcaagggctacgaggagaactacttctttatcttcagagatggagat
ggagtctactacaacgagctggagaccagagtacggctgagtaagaggagagctaaggct
ggagcccagtctactacaaacgctgtgctggtgtgtaagcacagagacatgaatgacaag
gagctggaagcacaggatgcacgtaaggctcagctggagaaccatgaaccagaggacgaa
gaagaggacatggacttgggtaaactgcaggactctggtgatgagaagggcagcgagagc
gagggagacaactctgacagtgactctgacagggaggatgaggatggaaagcggagtgga
gctgaggatgatgaagagggagtgaagcggaggaggaaggccagtggtagcggcagtgag
agtggcgaggaggaggtcaagctggcggatgaggtggaaatcttcggtagcgacgacgac
agtgatgacgacgacaacgagcccaagaatgaggcagcccggagcagtggggaggagggc
agtgggagcgaggagaaggagagccatagggagaggagtaggagcgtgtctccggcccac
agtagcggtagtgaccactcagagggtggccgtgcccagagtgggagtggcagtgagcag
gcctcagactccagcgatggcagtgacagtgaataa
DBGET
integrated database retrieval system
