Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139382926
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Entry
139382926 CDS
T10872
Name
(RefSeq) RILP-like protein 1
KO
K13883
Rab-interacting lysosomal protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04145
Phagosome
ocla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
139382926
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139382926
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139382926
Membrane trafficking [BR:
ocla04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
139382926
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RH1
RILP
Fib_alpha
Sec2p
ATG16
Motif
Other DBs
NCBI-GeneID:
139382926
NCBI-ProteinID:
XP_070983298
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Position
24:17127221..17147474
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AA seq
438 aa
AA seq
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MHTGANMENDCDINDQKQDVKKTGCCFERTCSALTVDDVYEMAKLIGSEVEKLIDSYGKE
SATVLLPKIVKVLELLESFASRNNAHKSKEEELLKAFETLHVQKQKKTRSVKEYDESRKI
EIQREVQQQEEAEKQRSRCEELQAQVLHLQTEIQELQSCLRGNHAQEDRVQRQEREVMLK
LKEVVDKQRDELRAKVQQIASMSKEVEALQEQLERFMKMNGELRHKQSIVTAQVKNAVER
KADMEADLREKQKEIECLTTQLEKANAAVGTASPCRSEWDLTGKLVIDLKDPNRPCFTKQ
EVREMLTERNELKANLFLVQEELSYYQREILNDERCPGFLLEAVRSAIKKQKTVIKAKML
GMPEDECSSDEEKGPLFERRAETDSKHSKPHESRIRNLFGFLTRSGSNHSSRSPSENKAA
SSWEIIDDTKTTTETETR
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgcacactggtgcaaacatggagaatgattgcgatattaacgatcaaaagcaagacgtc
aagaagacagggtgttgttttgaaaggacatgttcagcattaactgtggatgatgtatac
gaaatggctaaattgattggctcggaagtggaaaaacttatcgacagctacggtaaagag
agcgccacagtactgctgcctaaaatagtcaaagttctagagcttttggagagcttcgcc
tcgcggaacaatgcacacaagtcaaaagaagaagaattactcaaagcatttgaaacgcta
catgtacagaaacagaagaagacgagatctgtgaaagaatacgacgaaagcagaaagatt
gaaatacagcgggaggtgcagcagcaggaggaggcagagaagcagaggagcaggtgcgag
gagctgcaggcccaggtgttacatctacagactgagattcaggagttacagagctgcctg
aggggcaaccatgcccaggaagaccgtgtacaacggcaggagcgggaggtgatgcttaaa
ctgaaggaagtggttgacaagcagagagatgagctgagggccaaagtacagcagatagcc
agcatgtctaaagaggtggaggcgctgcaggagcagttggagcgcttcatgaagatgaat
ggggagctgagacacaagcagagcatcgtcacggcccaggtgaagaatgctgtggagagg
aaggctgacatggaggcagacctcagagagaaacagaaagagatagaatgcctcaccacc
cagctggaaaaggccaacgctgctgtgggcacggccagtccatgtaggtcagagtgggac
ctgacaggcaagctggtgatagaccttaaggaccccaacagaccctgtttcaccaagcag
gaggtcagagagatgctgacagagaggaacgagctcaaagccaacctgttcctggtgcag
gaggaactctcctactaccagagggagatcctgaatgatgagcggtgtccaggattcttg
ctggaggcagtacgttctgccataaagaaacagaaaactgtcatcaaggccaagatgctg
ggcatgccagaagacgaatgcagcagtgatgaggagaaaggccccctgtttgagaggaga
gcagagacagacagcaaacacagcaaaccacatgagtctcgcatcaggaacctctttggc
ttcctgactcgctccggcagcaaccacagcagccgtagtcccagtgaaaacaaggctgct
tcttcctgggaaatcatcgatgacaccaagaccaccacagagacagaaaccagatga
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