KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139382928
Entry
139382928         CDS       T10872                                 
Name
(RefSeq) transcription elongation factor SPT6-like isoform X1
  KO
K11292  transcription elongation factor SPT6
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Transcription machinery [BR:ocla03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     139382928
Chromosome and associated proteins [BR:ocla03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    Other Histone chaperones and regulators
     139382928
SSDB
Other DBs
NCBI-GeneID: 139382928
NCBI-ProteinID: XP_070983299
LinkDB
Position
24:19006916..19034010
AA seq 1729 aa
MDFIESEAEESEEEFGSTAYEEEEQENTEDQDEDGNLSGLIDDGVDEGEGEEEEEKEGKK
DKEGDSDSGEEIGHHKRKRSFDDRLDDDDIDLIEENLGVKVKRQKFRRLRDMSDDEDEEG
DDDVREAHEKDMIADEIFMGTGADEGEALDVPLHPGEDEQEDDEESDIDDFIVDDDGQPL
KKPKWRKKLPGYTDAALQEAQEIFGGDFDFAEFDTEAYEDAEEEEDADEESWDRPKKQTK
KRVGRRSIFEIYEPSELESSHMTDQDNEIRSTDMPERFQLRSTCVKPAEDDELEQEAEWI
YRNAFSTLTISMQENADYLDRGPATTFSRKGPSTIQKIKEALNFMRNQHFEVPFIAFYRK
EYVEPELNINDLWKVWQWDEKWTQLKTRKQNLRRLFQKMQGYQFEQISADPDKPLADGIR
PLDTSDLERLKDVQSSDELGDVYNHFLLYYGRDIPKMQNAARSSKKKLKKIKEVDEDGNE
KEVVEEEEEEEEEHPKGPDLKLASRRDMYSICQGAGLDGLAKKFGLTPEQFGENLRDSYQ
RHETEQFPAEPMELAKDYICSQFSTAEAVLEGTCYMVAMQIAREPLVRHVLRQTFQERAK
INIKPTKKGKKDVDEAHYGFSFKYLKNKPVKELNGDQFLKMLQAEEEGLLTINVCIDLIG
VKGYGGDQAYYEEIKQFYYRDEFSHQVQEWNRQRTLAIERSLKQFLYPQMAKELKNKLIA
EAKENIIKACSRKLYNWLKVAPYRPDQQVEEEEDEELMSEAQGKGIRVLGVAFSSSRDTP
VFCALVNGDGEVGDFLRLPYFLKRRNAWREDEREKKIHDIETLKKFLNSKKPHIIAIAGE
NRDAQMVIEDIKRTASELEQESSFPTIGVELVDNELAMLYMNSKKSEADFRDYPPLLRQA
VSVARKIQDPLVEYAQVCSSDDDILCLKLHPLQEHVVKEDLLNALYCEFINRVNEVGVDV
NRAMAHPYTQSLLQYVCGLGPRKGSHLLRILKQNNTRLENRTQLVTMCHMGPKVFINCAG
FIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANPAGALEEIL
ENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRSTYRGPNTEEIFNLL
TKETPETFYIGKLITSVVTGIAHRRPQGESYDQAIRNDETGLWQCPFCQQDNFPELSEVW
NHFDSGSCPGQAIGVRCRMDNGVTGFIPTKFLSDKVVKHPEERVKVGMTVHCRIMKIDIE
KLSVDLTCRTSDLSDKNNDWKLPKDTYYDFDTETEDVKQEEEAKKKQQRTTYIKRVIAHP
SFHNINFKQAEKMMESMDQGDVIIRPSSKGENHLTVTWKVADNIYQHIDVREEGKENAFS
LGHTLWINTEEFEDLDEITARYVQPMAAFARDLLGHKYFQECNGGDRKKMEEVLVKSKKE
KPTFIPYYVSACRELPGKFLLGYQPRAKPRVEFVTVTPEGFRYRGQIFPTVNGLFRWFKD
HFQDPVAGITPSSSSRTRTPASVNATPANINIADLTRAVNALPQNMTSQMFSAIAAVTGQ
GQNPNTTPAGWASSQYGYTGDSSGGGGSSSAYHVFATPAQQPIATPLLTPSYSYTTPTPS
QQQTITTPQYPSSTPQSSHGSQGHGHRPSSSTPTSSSSSRHHRTPTPKATSHTAVDWGKM
AEQWLQEKEAERKKTRPRMTPRPSPSPMIESTPMSLAGDATPLLDEMDR
NT seq 5190 nt   +upstreamnt  +downstreamnt
atggatttcatcgagagcgaagcagaggagtctgaggaggaatttgggagtacagcatat
gaggaggaggaacaggagaataccgaggaccaagatgaggatggaaacctcagtggtctg
attgatgatggtgtggatgaaggggaaggagaggaagaggaggagaaggaagggaagaaa
gataaggaaggagatagtgactctggggaggaaattggacaccataagaggaagagaagc
tttgacgaccgcttggatgatgatgatattgatctcattgaggagaatttgggagtgaaa
gtgaaaaggcaaaagttccgtcgtttgcgagacatgtcggacgatgaggatgaggaggga
gatgatgacgtcagggaggcccatgagaaggacatgatagcggatgagatcttcatgggg
acgggagcggatgagggcgaggcattggatgtgcctttgcatcccggggaggatgagcag
gaggacgatgaagagtctgatatcgatgactttattgtggatgatgacggacagcccttg
aagaaacccaagtggaggaagaagctgccaggatatacagatgcagcacttcaggaggcc
caggagatattcggaggggactttgactttgccgagtttgacactgaagcctatgaagat
gcagaggaggaggaggatgcagatgaagagtcatgggaccggcccaagaagcagaccaag
aagagggtgggccgacgcagtatctttgagatctatgagcccagtgagctggagagcagt
cacatgacggaccaggacaatgagatccgttccactgacatgccagagaggttccagttg
cgctccacttgtgtgaagcctgcagaggatgatgagttggaacaggaggctgagtggatc
tataggaatgccttctctactctcaccatctccatgcaggagaacgcagactatttggac
agaggtccagccactacattcagcagaaaaggccccagcaccatccagaagattaaagag
gctttgaatttcatgagaaaccaacactttgaggttccgttcatagcgttctacaggaaa
gagtatgtggaacctgaactcaatatcaatgatctgtggaaagtttggcagtgggatgag
aagtggacccagctgaaaacccgcaaacagaacctgagacgcctgttccagaagatgcag
ggataccagtttgaacagatctcagcagacccagataagccactggctgatggcattcga
ccattagacacttcagatttagagcggctgaaggatgtccagtctagtgatgaactgggc
gacgtctacaaccatttcctgctgtactatggccgggatatcccaaagatgcagaatgca
gccaggtccagcaagaagaagctgaagaagatcaaagaagtggatgaagatggtaatgag
aaggaagtagtagaggaggaagaagaggaagaagaggagcacccgaaggggccggacctg
aagcttgcatctcgcagggatatgtacagcatctgccagggtgcaggactggatggccta
gccaagaagtttggtctgactccagagcagtttggagagaacctacgtgacagttaccag
cgtcacgagacggagcagtttcctgctgagccaatggagctggctaaggactacatctgc
agccagtttagcacagcggaggcagtactggagggaacttgctacatggtcgccatgcag
atcgctcgggagcctctagtcagacatgtgctccgacagacattccaggagagagccaag
atcaacatcaaacccaccaagaagggaaagaaggatgtggatgaggcccattatggcttc
tcctttaaatacctgaaaaacaagcctgtaaaggagctgaatggagaccagttcctcaag
atgttgcaggcagaggaagagggcctgctcaccattaacgtctgtattgacctgattgga
gtgaaggggtacggaggtgaccaggcatactatgaagagataaagcagttttactacaga
gatgagttcagccaccaggttcaggagtggaacagacagcgcactctggctatcgagcgc
tccctcaaacagttcctttacccgcagatggcgaaagagctgaagaacaaacttattgca
gaagcaaaggagaacatcatcaaggcctgcagcaggaagctgtataactggctgaaggtg
gcgccctatcggcccgaccaacaagtggaggaggaggaggacgaggagctcatgtctgag
gcccagggcaaagggatccgcgtgctgggagtggccttctcatccagcagagacacccca
gtgttctgcgccctggtgaatggtgacggagaagtaggggatttcctcaggcttccttac
ttcctgaagaggaggaacgcatggagggaggatgaaagggagaaaaagatccacgatatt
gaaaccctaaagaagtttctgaacagcaagaagcctcacatcatcgctatagctggggag
aacagggatgcccagatggtgattgaggacattaaacgcactgccagtgagctggagcag
gagtcctctttccccaccattggggtggagctggttgacaatgaactggccatgctctac
atgaacagcaagaagtcagaggcagatttccgggactacccccctctcctgagacaggct
gtgtctgtggccaggaagatccaggaccccctggtggagtatgctcaggtgtgcagcagt
gacgatgacatcctctgcctcaagttgcaccctttgcaggagcatgtagtgaaggaggac
ctgctgaatgctctgtactgtgagttcatcaaccgggtgaatgaagtgggtgtggatgtg
aaccgggccatggcccacccctacacccagagcctgttgcagtacgtctgtggcctgggg
cccaggaagggatcccacctgctcaggatcctgaagcaaaataacactcgtctggagaac
cgcactcagctggtcaccatgtgtcacatgggccccaaggtcttcatcaactgtgctggt
ttcatcaagattgacacagcttctctgggcgatagtactgactcctatattgaggttctg
gacgggtcacgggtgcacccagagacctatgagtgggccaggaagatggccgtggacgct
ctggagtacgatgagtcagcggaggacgccaacccagccggagcactggaggagatcctg
gaaaacccagagcggctcaaagacctggacttggatgccttcgctgaggagctggaaaga
cagggttatggtaacaagggcatcaccctgtatgacatccgtgctgagctgagctgcagg
tacaaagacctgaggtccacctacagaggacctaacacagaggagatcttcaacctgctc
accaaggagacaccagagaccttctacatcggtaaacttattaccagtgtggtgacaggc
attgctcaccggcgcccccagggggagagttatgaccaggccataaggaatgatgagaca
ggtctgtggcagtgtcctttctgtcagcaggacaactttcctgagctcagtgaggtgtgg
aatcattttgacagtggctcctgccctggccaagctattggggtccgctgtcgcatggac
aatggagtcaccggctttatccctaccaagttcctcagtgacaaagtggtcaagcatcct
gaagaaagggttaaggtgggcatgacagtgcactgcaggatcatgaagattgacattgag
aagctcagtgtggatctgacctgtcggacgtcagacctgtcggataagaacaacgactgg
aagcttcccaaggacacctactacgactttgacactgagacagaggatgtgaagcaggag
gaggaggccaagaagaaacagcagagaacaacctacattaagagggtgatagcccaccca
tcgttccataacatcaacttcaagcaggcagagaagatgatggagtccatggaccaggga
gatgtgatcatcaggcccagtagtaagggagagaaccacctgactgttacttggaaggtt
gctgataacatctaccagcacattgacgtacgagaggagggcaaggagaacgccttcagc
ctgggacataccctgtggatcaacactgaggaatttgaagatctggatgaaatcacagcc
agatacgttcaaccaatggctgcgtttgctcgcgatctgctcggtcacaagtattttcaa
gaatgcaatggtggagaccgaaagaagatggaggaggtcttggtgaaaagcaagaaggag
aagcctacattcatcccctactatgtgtctgcctgtagagagctgccagggaagtttctg
ctcggttaccagccccgcgcaaagccaagggttgagtttgtgactgtcacgcctgagggg
ttcagatacagaggacagatttttcccacagtcaatggacttttccgatggttcaaagac
catttccaggatccagtggcagggattactcccagcagcagcagtagaacacgaacccca
gcctctgtcaatgccacgccagccaatattaacattgcagatctcactcgtgcagtgaac
gccctccctcagaacatgacctctcagatgttcagtgccattgccgctgtaacgggccag
ggccagaaccccaacaccacacctgccggttgggcatccagccagtacggctacactggg
gacagcagcggtggggggggcagcagcagcgcctatcacgtgtttgctacaccagctcag
cagcccattgctactccccttctgacgccaagctattcatacaccacccccacccctagc
cagcagcagactatcaccacaccccaataccccagcagcactccccagtcctcacacggg
tcacaaggacatggacaccgcccttcctcctccacaccaacatcatcatcctcttcccgc
caccacaggacaccaacaccaaaggcaacttcccacacagcagtggactggggcaagatg
gccgagcagtggctccaggagaaagaggcagagcgcaagaagacgaggcccagaatgacc
ccacgaccttctcccagccccatgattgagagcacgcccatgtccctcgctggagacgcc
acaccgctgctggatgagatggatcgctag

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