Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139382939
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Entry
139382939 CDS
T10872
Name
(RefSeq) tumor necrosis factor receptor superfamily member 19-like isoform X1
KO
K05155
tumor necrosis factor receptor superfamily member 19
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
139382939
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
ocla04050
]
139382939
Cytokine receptors [BR:
ocla04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
139382939
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Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
139382939
NCBI-ProteinID:
XP_070983315
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Position
24:complement(22680624..22696444)
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AA seq
399 aa
AA seq
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MAWMFGQTWLLLLTFHVIYSSLVPVTAEEETSECREQEYKDQLGNCKPCKQCDAGHELSK
ECGFGYGEDARCVPCRSSRFKEDRSLQKCKPCLDCGLNNRFQKGNCSTTRNAVCGDCLPG
FYRKTKLSGFQDMECIPCGDPPPPYEPHCSGRVNLVPIPPVVTSPRDMALAAVICSALAT
VLLALLILCVIYFKRQLLEKKPSASLRSQDGPYSGAELSCLDRRKLHDFPQHPCCQCHHG
PGHTCGRSNYWWASTSTSSGPVHLIPSLCCDEICSLGRSRDTSPFQSQISLNEGCSINPC
EENVLAYLKAHPEPCISREAGETWPLMQNTDCVESLGSPRYNLEPTERCDEGEEGEEKEE
EGCTLSEDTQEKPTDQSQEKTGALTEVLLPKQQPSSLEG
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggcctggatgtttggtcaaacctggttacttctgctgacatttcatgtaatatactca
tctctggttcctgtaacggcggaggaggagaccagtgaatgcagagaacaagagtacaag
gatcagcttgggaactgtaaaccctgcaagcagtgcgacgcgggacacgagctatcaaag
gaatgtggctttggttacggagaggatgcccggtgtgtgccctgcagaagcagccgcttc
aaagaagataggagcctgcagaagtgcaagccctgcctggactgtggcctgaacaaccgc
ttccagaagggcaactgttccaccaccagaaatgctgtgtgtggagactgtctgcccggg
ttttacaggaaaactaagctgagcggattccaagatatggagtgcataccatgtggggac
cctccacctccatatgaaccacactgcagcgggcgggtgaacctggttcccatccccccg
gtggtgaccagccctcgggacatggctctggcagcagtcatctgtagcgctctggccacc
gtgctgctggccctgctcatcctctgtgtcatctacttcaagagacagctgctggagaag
aagcccagcgcatctctaaggtcccaggatggtccgtacagtggagcagagttgtcctgc
ctggaccgacggaagctccatgacttccctcagcacccatgctgccaatgtcaccatggg
ccaggccacacctgtggtaggtccaattactggtgggcttctacaagcacatcaagtggc
ccagtgcacttgatcccctccctgtgctgtgatgaaatctgcagtctgggccggagcaga
gacaccagccccttccagtcccagatcagcctcaacgagggatgcagcataaacccctgt
gaggagaacgtcctggcctatctgaaagcccatccagagccgtgcatctccagagaggct
ggcgagacatggccactcatgcagaacaccgactgtgtcgagagcttgggatcgccccgc
tacaacctagaacccacagagaggtgcgatgagggcgaggagggcgaggagaaagaggaa
gaggggtgcacgttaagtgaggacacacaggagaagccaactgatcagagccaggagaag
actggtgccttgacagaggtcctccttccaaagcagcagccatcttcactggaaggatga
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