Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139382959
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Entry
139382959 CDS
T10872
Name
(RefSeq) immunoglobulin superfamily member 11-like isoform X1
KO
K06791
immunoglobulin superfamily, member 11
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
139382959
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocla04515
]
139382959
Cell adhesion molecules [BR:
ocla04515
]
Immunoglobulin superfamily
CTX family
139382959
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Paralog
GFIT
Motif
Pfam:
Ig_3
V-set
Ig_2
ig
I-set
Ig_VEGFR-1-like_5th
VEGFR1-3_N_Ig-like
C2-set_3
Sp38
Betaherpes_U91
DUF2448
Motif
Other DBs
NCBI-GeneID:
139382959
NCBI-ProteinID:
XP_070983336
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All DBs
Position
24:9484238..9598421
Genome browser
AA seq
461 aa
AA seq
DB search
MMKFHNSDLWIAWLVLFCMEVSVRALDVTVTQSSIQVARGQAAILPCSFSTSAALNNLNI
IWMVIPLSNANQPEQVIIYQGGQVFSLANHLNGRVGFVATMPSTSASIFINNTQLSDTGT
YQCLVNNLPDRGGRNIGVIGLTVLVPPSVPSCRVQGTLDVGADIMLMCSSEEGIPTPSYT
WVKLESLPKLPHTAMQDQMQGTVTLRNISTSTSGLYQCTASNAIAKSTCLLNLQVVAPQP
QSVGLIAGTIATGVLAVIICSLLVLVTLFYWKNKNKYEEEEIPNEIREDDLPPKRSASVK
AFHADASSSENDTLTSTNTYNSRYWHNPKPNYDTNSYTRYNGDTRQTFSTGQAGHTGQTG
GHAAHTGHGTLAPPGSAPLARQAYSNGSHTLPPPKTLVVTTNSAPSPPTMVRSNGSVSLK
PVTVASHGGYTHSYAVSQATLERMGAVPVMVPAQSRAGSLV
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaattccataattcggacctatggattgcttggctggttttattttgcatggaa
gtgagcgtgagggcgttggatgtcacagtgacccagagcagcatccaggttgcccgcggc
caggcggccatcttgccctgctccttctccaccagcgctgccctcaacaacctcaacatt
atctggatggtcatcccgctgtccaatgccaaccagcccgaacaggtgatcatctaccaa
ggcggccaagtgttcagtctagccaaccacttaaacggccgggtgggtttcgtggccacc
atgccgagtacaagtgcctctatcttcatcaacaacacccagctgtcagacacggggact
taccagtgcctggtcaacaacctccccgacagaggggggcgcaacatcggggtcatcggc
ctcaccgtgctggtgcccccgtcggtgccctcatgccgtgtccagggcacgctggacgtg
ggcgctgacatcatgctgatgtgcagcagcgaggaggggatccctacgcccagctacacc
tgggtgaaactggagtcgctgcccaagctgccccacaccgccatgcaagaccagatgcaa
gggaccgtaacactgaggaacatcagtaccagtacctctggtctgtaccagtgtacagcc
tccaacgccatcgccaaaagtacctgtctactcaacctgcaggttgtggcaccccagccc
cagagtgtgggtctcatagctggcaccatcgccacgggcgtgttggctgtcatcatctgc
tctctactggtgctggtgacactcttctactggaagaacaagaacaaatatgaggaggag
gagatacccaacgagatcagggaggacgacctgccccctaagaggtcggcttcagtgaaa
gcgtttcacgccgacgcctcatcctctgagaacgacaccctgacgtccaccaacacctac
aacagccgctattggcacaaccccaagcccaactacgacaccaactcctacacccgctac
aacggcgacacgcgccagacgttctctacggggcaggcgggtcacacaggtcaaacgggg
ggacatgcagcgcacacaggacacgggacgctagctccgccgggctccgcaccccttgcc
cgccaggcctactctaatggtagccacacactccccccgcccaagactctagtggtcacc
accaactccgccccctcccctcccaccatggtgcgcagcaatggctcggtgagcctgaag
cccgtgacggtggcatcgcatggcgggtacacacactcgtacgctgtaagccaggccacg
ctggagcgcatgggcgccgtgcccgtcatggtgccagcccagagcagagcaggctctctg
gtctaa
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